Alan Dorin

CV
h-index10
6papers
38citations
Novelty26%
AI Score20

6 Papers

CVMay 10, 2022
Spatial Monitoring and Insect Behavioural Analysis Using Computer Vision for Precision Pollination

Malika Nisal Ratnayake, Don Chathurika Amarathunga, Asaduz Zaman et al.

Insects are the most important global pollinator of crops and play a key role in maintaining the sustainability of natural ecosystems. Insect pollination monitoring and management are therefore essential for improving crop production and food security. Computer vision facilitated pollinator monitoring can intensify data collection over what is feasible using manual approaches. The new data it generates may provide a detailed understanding of insect distributions and facilitate fine-grained analysis sufficient to predict their pollination efficacy and underpin precision pollination. Current computer vision facilitated insect tracking in complex outdoor environments is restricted in spatial coverage and often constrained to a single insect species. This limits its relevance to agriculture. Therefore, in this article we introduce a novel system to facilitate markerless data capture for insect counting, insect motion tracking, behaviour analysis and pollination prediction across large agricultural areas. Our system is comprised of edge computing multi-point video recording, offline automated multispecies insect counting, tracking and behavioural analysis. We implement and test our system on a commercial berry farm to demonstrate its capabilities. Our system successfully tracked four insect varieties, at nine monitoring stations within polytunnels, obtaining an F-score above 0.8 for each variety. The system enabled calculation of key metrics to assess the relative pollination impact of each insect variety. With this technological advancement, detailed, ongoing data collection for precision pollination becomes achievable. This is important to inform growers and apiarists managing crop pollination, as it allows data-driven decisions to be made to improve food production and food security.

CVMay 23, 2024
A motion-based compression algorithm for resource-constrained video camera traps

Malika Nisal Ratnayake, Lex Gallon, Adel N. Toosi et al.

Field-captured video facilitates detailed studies of spatio-temporal aspects of animal locomotion, decision-making and environmental interactions including predator-prey relationships and habitat utilisation. But even though data capture is cheap with mass-produced hardware, storage, processing and transmission overheads provide a hurdle to acquisition of high resolution video from field-situated edge computing devices. Efficient compression algorithms are therefore essential if monitoring is to be conducted on single-board computers in situations where such hurdles must be overcome. Animal motion tracking in the field has unique characteristics that necessitate the use of novel video compression techniques, which may be underexplored or unsuitable in other contexts. In this article, we therefore introduce a new motion analysis-based video compression algorithm specifically designed for camera traps. We implemented and tested this algorithm using a case study of insect-pollinator motion tracking on three popular edge computing platforms. The algorithm identifies and stores only image regions depicting motion relevant to pollination monitoring, reducing overall data size by an average of 87% across diverse test datasets. Our experiments demonstrate the algorithm's capability to preserve critical information for insect behaviour analysis through both manual observation and automatic analysis of the compressed footage. The method presented in this paper enhances the applicability of low-powered computer vision edge devices to remote, in situ animal motion monitoring, and improves the efficiency of playback during behavioural analyses. Our new software, EcoMotionZip, is available Open Access.

CVMay 22, 2024
Markerless retro-identification complements re-identification of individual insect subjects in archived image data of biological experiments

Asaduz Zaman, Vanessa Kellermann, Alan Dorin

This study introduces markerless retro-identification of animals, a novel concept and practical technique to identify past occurrences of organisms in archived data, that complements traditional forward-looking chronological re-identification methods in longitudinal behavioural research. Identification of a key individual among multiple subjects may occur late in an experiment if it reveals itself through interesting behaviour after a period of undifferentiated performance. Often, longitudinal studies also encounter subject attrition during experiments. Effort invested in training software models to recognise and track such individuals is wasted if they fail to complete the experiment. Ideally, we would be able to select individuals who both complete an experiment and/or differentiate themselves via interesting behaviour, prior to investing computational resources in training image classification software to recognise them. We propose retro-identification for model training to achieve this aim. This reduces manual annotation effort and computational resources by identifying subjects only after they differentiate themselves late, or at an experiment's conclusion. Our study dataset comprises observations made of morphologically similar reed bees (\textit{Exoneura robusta}) over five days. We evaluated model performance by training on final day five data, testing on the sequence of preceding days, and comparing results to the usual chronological evaluation from day one. Results indicate no significant accuracy difference between models. This underscores retro-identification's value in improving resource efficiency in longitudinal animal studies.

PEMay 26, 2023
Image background assessment as a novel technique for insect microhabitat identification

Sesa Singha Roy, Reid Tingley, Alan Dorin

The effects of climate change, urbanisation and agriculture are changing the way insects occupy habitats. Some species may utilise anthropogenic microhabitat features for their existence, either because they prefer them to natural features, or because of no choice. Other species are dependent on natural microhabitats. Identifying and analysing these insects' use of natural and anthropogenic microhabitats is important to assess their responses to a changing environment, for improving pollination and managing invasive pests. Traditional studies of insect microhabitat use can now be supplemented by machine learning-based insect image analysis. Typically, research has focused on automatic insect classification, but valuable data in image backgrounds has been ignored. In this research, we analysed the image backgrounds available on the ALA database to determine their microhabitats. We analysed the microhabitats of three insect species common across Australia: Drone flies, European honeybees and European wasps. Image backgrounds were classified as natural or anthropogenic microhabitats using computer vision and machine learning tools benchmarked against a manual classification algorithm. We found flies and honeybees in natural microhabitats, confirming their need for natural havens within cities. Wasps were commonly seen in anthropogenic microhabitats. Results show these insects are well adapted to survive in cities. Management of this invasive pest requires a thoughtful reduction of their access to human-provided resources. The assessment of insect image backgrounds is instructive to document the use of microhabitats by insects. The method offers insight that is increasingly vital for biodiversity management as urbanisation continues to encroach on natural ecosystems and we must consciously provide resources within built environments to maintain insect biodiversity and manage invasive pests.

AIJun 4, 2018
Past Visions of Artificial Futures: One Hundred and Fifty Years under the Spectre of Evolving Machines

Tim Taylor, Alan Dorin

The influence of Artificial Intelligence (AI) and Artificial Life (ALife) technologies upon society, and their potential to fundamentally shape the future evolution of humankind, are topics very much at the forefront of current scientific, governmental and public debate. While these might seem like very modern concerns, they have a long history that is often disregarded in contemporary discourse. Insofar as current debates do acknowledge the history of these ideas, they rarely look back further than the origin of the modern digital computer age in the 1940s-50s. In this paper we explore the earlier history of these concepts. We focus in particular on the idea of self-reproducing and evolving machines, and potential implications for our own species. We show that discussion of these topics arose in the 1860s, within a decade of the publication of Darwin's The Origin of Species, and attracted increasing interest from scientists, novelists and the general public in the early 1900s. After introducing the relevant work from this period, we categorise the various visions presented by these authors of the future implications of evolving machines for humanity. We suggest that current debates on the co-evolution of society and technology can be enriched by a proper appreciation of the long history of the ideas involved.

NEDec 7, 2015
Digital Genesis: Computers, Evolution and Artificial Life

Tim Taylor, Alan Dorin, Kevin Korb

The application of evolution in the digital realm, with the goal of creating artificial intelligence and artificial life, has a history as long as that of the digital computer itself. We illustrate the intertwined history of these ideas, starting with the early theoretical work of John von Neumann and the pioneering experimental work of Nils Aall Barricelli. We argue that evolutionary thinking and artificial life will continue to play an integral role in the future development of the digital world.