Khuram Naveed

Mehwish Mehmood, Khuram Naveed, Khursheed Aurangzeb et al.

Glaucoma is an eye disease that causes damage to the optic nerve, which can lead to visual loss and permanent blindness. Early glaucoma detection is therefore critical in order to avoid permanent blindness. The estimation of the cup-to-disc ratio (CDR) during an examination of the optical disc (OD) is used for the diagnosis of glaucoma. In this paper, we present the EDDense-Net segmentation network for the joint segmentation of OC and OD. The encoder and decoder in this network are made up of dense blocks with a grouped convolutional layer in each block, allowing the network to acquire and convey spatial information from the image while simultaneously reducing the network's complexity. To reduce spatial information loss, the optimal number of filters in all convolution layers were utilised. In semantic segmentation, dice pixel classification is employed in the decoder to alleviate the problem of class imbalance. The proposed network was evaluated on two publicly available datasets where it outperformed existing state-of-the-art methods in terms of accuracy and efficiency. For the diagnosis and analysis of glaucoma, this method can be used as a second opinion system to assist medical ophthalmologists.

Khuram Naveed, Ruben Pauwels

Cone-beam computed tomography (CBCT) is widely used in dental and maxillofacial imaging, but low-dose acquisition introduces strong, spatially varying noise that degrades soft-tissue visibility and obscures fine anatomical structures. Classical denoising methods struggle to suppress noise in CBCT while preserving edges. Although deep learning-based approaches offer high-fidelity restoration, their use in CBCT denoising is limited by the scarcity of high-resolution CBCT data for supervised training. To address this research gap, we propose a novel Hybrid Attention Residual U-Net (HARU-Net) for high-quality denoising of CBCT data, trained on a cadaver dataset of human hemimandibles acquired using a high-resolution protocol of the 3D Accuitomo 170 (J. Morita, Kyoto, Japan) CBCT system. The novel contribution of this approach is the integration of three complementary architectural components: (i) a hybrid attention transformer block (HAB) embedded within each skip connection to selectively emphasize salient anatomical features, (ii) a residual hybrid attention transformer group (RHAG) at the bottleneck to strengthen global contextual modeling and long-range feature interactions, and (iii) residual learning convolutional blocks to facilitate deeper, more stable feature extraction throughout the network. HARU-Net consistently outperforms state-of-the-art (SOTA) methods including SwinIR and Uformer, achieving the highest PSNR (37.52 dB), highest SSIM (0.9557), and lowest GMSD (0.1084). This effective and clinically reliable CBCT denoising is achieved at a computational cost significantly lower than that of the SOTA methods, offering a practical advancement toward improving diagnostic quality in low-dose CBCT imaging.

Johan Andreas Balle Rubak, Khuram Naveed, Sanyam Jain et al.

Objectives: Federated learning (FL) may mitigate privacy constraints, heterogeneous data quality, and inconsistent labeling in dental diagnostic AI. We compared FL with centralized (CL) and local learning (LL) for tooth segmentation in panoramic radiographs across multiple data corruption scenarios. Methods: An Attention U-Net was trained on 2066 radiographs from six institutions across four settings: baseline (unaltered data); label manipulation (dilated/missing annotations); image-quality manipulation (additive Gaussian noise); and exclusion of a faulty client with corrupted data. FL was implemented via the Flower AI framework. Per-client training- and validation-loss trajectories were monitored for anomaly detection and a set of metrics (Dice, IoU, HD, HD95 and ASSD) was evaluated on a hold-out test set. From these metrics significance results were reported through Wilcoxon signed-rank test. CL and LL served as comparators. Results: Baseline: FL achieved a median Dice of 0.94889 (ASSD: 1.33229), slightly better than CL at 0.94706 (ASSD: 1.37074) and LL at 0.93557-0.94026 (ASSD: 1.51910-1.69777). Label manipulation: FL maintained the best median Dice score at 0.94884 (ASSD: 1.46487) versus CL's 0.94183 (ASSD: 1.75738) and LL's 0.93003-0.94026 (ASSD: 1.51910-2.11462). Image noise: FL led with Dice at 0.94853 (ASSD: 1.31088); CL scored 0.94787 (ASSD: 1.36131); LL ranged from 0.93179-0.94026 (ASSD: 1.51910-1.77350). Faulty-client exclusion: FL reached Dice at 0.94790 (ASSD: 1.33113) better than CL's 0.94550 (ASSD: 1.39318). Loss-curve monitoring reliably flagged the corrupted site. Conclusions: FL matches or exceeds CL and outperforms LL across corruption scenarios while preserving privacy. Per-client loss trajectories provide an effective anomaly-detection mechanism and support FL as a practical, privacy-preserving approach for scalable clinical AI deployment.

Samia Saeed, Khuram Naveed

Breast cancer, the second leading cause of cancer-related deaths globally, accounts for a quarter of all cancer cases [1]. To lower this death rate, it is crucial to detect tumors early, as early-stage detection significantly improves treatment outcomes. Advances in non-invasive imaging techniques have made early detection possible through computer-aided detection (CAD) systems which rely on traditional image analysis to identify malignancies. However, there is a growing shift towards deep learning methods due to their superior effectiveness. Despite their potential, deep learning methods often struggle with accuracy due to the limited availability of large-labeled datasets for training. To address this issue, our study introduces a Contrastive Learning (CL) framework, which excels with smaller labeled datasets. In this regard, we train Resnet-50 in semi supervised CL approach using similarity index on a large amount of unlabeled mammogram data. In this regard, we use various augmentation and transformations which help improve the performance of our approach. Finally, we tune our model on a small set of labelled data that outperforms the existing state of the art. Specifically, we observed a 96.7% accuracy in detecting breast cancer on benchmark datasets INbreast and MIAS.

Sanyam Jain, Khuram Naveed, Illia Oleksiienko et al.

This work introduces InJecteD, a framework for interpreting Denoising Diffusion Probabilistic Models (DDPMs) by analyzing sample trajectories during the denoising process of 2D point cloud generation. We apply this framework to three datasets from the Datasaurus Dozen bullseye, dino, and circle using a simplified DDPM architecture with customizable input and time embeddings. Our approach quantifies trajectory properties, including displacement, velocity, clustering, and drift field dynamics, using statistical metrics such as Wasserstein distance and cosine similarity. By enhancing model transparency, InJecteD supports human AI collaboration by enabling practitioners to debug and refine generative models. Experiments reveal distinct denoising phases: initial noise exploration, rapid shape formation, and final refinement, with dataset-specific behaviors example, bullseyes concentric convergence vs. dinos complex contour formation. We evaluate four model configurations, varying embeddings and noise schedules, demonstrating that Fourier based embeddings improve trajectory stability and reconstruction quality

Khuram Naveed, Bruna Neves de Freitas, Ruben Pauwels

Convolutional denoising autoencoders (DAEs) are powerful tools for image restoration. However, they inherit a key limitation of convolutional neural networks (CNNs): they tend to recover low-frequency features, such as smooth regions, more effectively than high-frequency details. This leads to the loss of fine details, which is particularly problematic in dental radiographs where preserving subtle anatomical structures is crucial. While self-attention mechanisms can help mitigate this issue by emphasizing important features, conventional attention methods often prioritize features corresponding to cleaner regions and may overlook those obscured by noise. To address this limitation, we propose a noise-aware self-attention method, which allows the model to effectively focus on and recover key features even within noisy regions. Building on this approach, we introduce the noise-aware attention-enhanced denoising autoencoder (NAADA) network for enhancing noisy panoramic dental radiographs. Compared with the recent state of the art (and much heavier) methods like Uformer, MResDNN etc., our method improves the reconstruction of fine details, ensuring better image quality and diagnostic accuracy.