Michael Behrisch

Daniel Atzberger, Tim Cech, Willy Scheibel et al.

The semantic similarity between documents of a text corpus can be visualized using map-like metaphors based on two-dimensional scatterplot layouts. These layouts result from a dimensionality reduction on the document-term matrix or a representation within a latent embedding, including topic models. Thereby, the resulting layout depends on the input data and hyperparameters of the dimensionality reduction and is therefore affected by changes in them. Furthermore, the resulting layout is affected by changes in the input data and hyperparameters of the dimensionality reduction. However, such changes to the layout require additional cognitive efforts from the user. In this work, we present a sensitivity study that analyzes the stability of these layouts concerning (1) changes in the text corpora, (2) changes in the hyperparameter, and (3) randomness in the initialization. Our approach has two stages: data measurement and data analysis. First, we derived layouts for the combination of three text corpora and six text embeddings and a grid-search-inspired hyperparameter selection of the dimensionality reductions. Afterward, we quantified the similarity of the layouts through ten metrics, concerning local and global structures and class separation. Second, we analyzed the resulting 42817 tabular data points in a descriptive statistical analysis. From this, we derived guidelines for informed decisions on the layout algorithm and highlight specific hyperparameter settings. We provide our implementation as a Git repository at https://github.com/hpicgs/Topic-Models-and-Dimensionality-Reduction-Sensitivity-Study and results as Zenodo archive at https://doi.org/10.5281/zenodo.12772898.

Alister Machado, Alexandru Telea, Michael Behrisch

Projections, or dimensionality reduction methods, are techniques of choice for the visual exploration of high-dimensional data. Many such techniques exist, each one of them having a distinct visual signature - i.e., a recognizable way to arrange points in the resulting scatterplot. Such signatures are implicit consequences of algorithm design, such as whether the method focuses on local vs global data pattern preservation; optimization techniques; and hyperparameter settings. We present a novel projection technique - ShaRP - that provides users explicit control over the visual signature of the created scatterplot, which can cater better to interactive visualization scenarios. ShaRP scales well with dimensionality and dataset size, generically handles any quantitative dataset, and provides this extended functionality of controlling projection shapes at a small, user-controllable cost in terms of quality metrics.

Yu Wang, Frederik L. Dennig, Michael Behrisch et al.

Projections (or dimensionality reduction) methods $P$ aim to map high-dimensional data to typically 2D scatterplots for visual exploration. Inverse projection methods $P^{-1}$ aim to map this 2D space to the data space to support tasks such as data augmentation, classifier analysis, and data imputation. Current $P^{-1}$ methods suffer from a fundamental limitation -- they can only generate a fixed surface-like structure in data space, which poorly covers the richness of this space. We address this by a new method that can `sweep' the data space under user control. Our method works generically for any $P$ technique and dataset, is controlled by two intuitive user-set parameters, and is simple to implement. We demonstrate it by an extensive application involving image manipulation for style transfer.

Yuncong Yu, Dylan Kruyff, Tim Becker et al.

We present PSEUDo, an adaptive feature learning technique for exploring visual patterns in multi-track sequential data. Our approach is designed with the primary focus to overcome the uneconomic retraining requirements and inflexible representation learning in current deep learning-based systems. Multi-track time series data are generated on an unprecedented scale due to increased sensors and data storage. These datasets hold valuable patterns, like in neuromarketing, where researchers try to link patterns in multivariate sequential data from physiological sensors to the purchase behavior of products and services. But a lack of ground truth and high variance make automatic pattern detection unreliable. Our advancements are based on a novel query-aware locality-sensitive hashing technique to create a feature-based representation of multivariate time series windows. Most importantly, our algorithm features sub-linear training and inference time. We can even accomplish both the modeling and comparison of 10,000 different 64-track time series, each with 100 time steps (a typical EEG dataset) under 0.8 seconds. This performance gain allows for a rapid relevance feedback-driven adaption of the underlying pattern similarity model and enables the user to modify the speed-vs-accuracy trade-off gradually. We demonstrate superiority of PSEUDo in terms of efficiency, accuracy, and steerability through a quantitative performance comparison and a qualitative visual quality comparison to the state-of-the-art algorithms in the field. Moreover, we showcase the usability of PSEUDo through a case study demonstrating our visual pattern retrieval concepts in a large meteorological dataset. We find that our adaptive models can accurately capture the user's notion of similarity and allow for an understandable exploratory visual pattern retrieval in large multivariate time series datasets.

Nicholas Ruta, Naoko Sawada, Katy McKeough et al.

Comparing many long time series is challenging to do by hand. Clustering time series enables data analysts to discover relevance between and anomalies among multiple time series. However, even after reasonable clustering, analysts have to scrutinize correlations between clusters or similarities within a cluster. We developed SAX Navigator, an interactive visualization tool, that allows users to hierarchically explore global patterns as well as individual observations across large collections of time series data. Our visualization provides a unique way to navigate time series that involves a "vocabulary of patterns" developed by using a dimensionality reduction technique,Symbolic Aggregate approXimation(SAX). With SAX, the time series data clusters efficiently and is quicker to query at scale. We demonstrate the ability of SAX Navigator to analyze patterns in large time series data based on three case studies for an astronomy data set. We verify the usability of our system through a think-aloud study with an astronomy domain scientist.

Frederik L. Dennig, Tom Polk, Zudi Lin et al.

The detection of interesting patterns in large high-dimensional datasets is difficult because of their dimensionality and pattern complexity. Therefore, analysts require automated support for the extraction of relevant patterns. In this paper, we present FDive, a visual active learning system that helps to create visually explorable relevance models, assisted by learning a pattern-based similarity. We use a small set of user-provided labels to rank similarity measures, consisting of feature descriptor and distance function combinations, by their ability to distinguish relevant from irrelevant data. Based on the best-ranked similarity measure, the system calculates an interactive Self-Organizing Map-based relevance model, which classifies data according to the cluster affiliation. It also automatically prompts further relevance feedback to improve its accuracy. Uncertain areas, especially near the decision boundaries, are highlighted and can be refined by the user. We evaluate our approach by comparison to state-of-the-art feature selection techniques and demonstrate the usefulness of our approach by a case study classifying electron microscopy images of brain cells. The results show that FDive enhances both the quality and understanding of relevance models and can thus lead to new insights for brain research.

Michael Behrisch, Robert Krueger, Fritz Lekschas et al.

Pattern extraction algorithms are enabling insights into the ever-growing amount of today's datasets by translating reoccurring data properties into compact representations. Yet, a practical problem arises: With increasing data volumes and complexity also the number of patterns increases, leaving the analyst with a vast result space. Current algorithmic and especially visualization approaches often fail to answer central overview questions essential for a comprehensive understanding of pattern distributions and support, their quality, and relevance to the analysis task. To address these challenges, we contribute a visual analytics pipeline targeted on the pattern-driven exploration of result spaces in a semi-automatic fashion. Specifically, we combine image feature analysis and unsupervised learning to partition the pattern space into interpretable, coherent chunks, which should be given priority in a subsequent in-depth analysis. In our analysis scenarios, no ground-truth is given. Thus, we employ and evaluate novel quality metrics derived from the distance distributions of our image feature vectors and the derived cluster model to guide the feature selection process. We visualize our results interactively, allowing the user to drill down from overview to detail into the pattern space and demonstrate our techniques in a case study on biomedical genomic data.

Hendrik Strobelt, Sebastian Gehrmann, Michael Behrisch et al.

Neural Sequence-to-Sequence models have proven to be accurate and robust for many sequence prediction tasks, and have become the standard approach for automatic translation of text. The models work in a five stage blackbox process that involves encoding a source sequence to a vector space and then decoding out to a new target sequence. This process is now standard, but like many deep learning methods remains quite difficult to understand or debug. In this work, we present a visual analysis tool that allows interaction with a trained sequence-to-sequence model through each stage of the translation process. The aim is to identify which patterns have been learned and to detect model errors. We demonstrate the utility of our tool through several real-world large-scale sequence-to-sequence use cases.