2.3OTJan 19, 2023
The Lost Art of Mathematical ModellingLinnéa Gyllingberg, Abeba Birhane, David J. T. Sumpter
We provide a critique of mathematical biology in light of rapid developments in modern machine learning. We argue that out of the three modelling activities -- (1) formulating models; (2) analysing models; and (3) fitting or comparing models to data -- inherent to mathematical biology, researchers currently focus too much on activity (2) at the cost of (1). This trend, we propose, can be reversed by realising that any given biological phenomena can be modelled in an infinite number of different ways, through the adoption of an open/pluralistic approach. We explain the open approach using fish locomotion as a case study and illustrate some of the pitfalls -- universalism, creating models of models, etc. -- that hinder mathematical biology. We then ask how we might rediscover a lost art: that of creative mathematical modelling. This article is dedicated to the memory of Edmund Crampin.
2.0LGNov 19, 2023
Precision at the indistinguishability threshold: a method for evaluating classification algorithmsDavid J. T. Sumpter
There exist a wide range of single number metrics for assessing performance of classification algorithms, including AUC and the F1-score (Wikipedia lists 17 such metrics, with 27 different names). In this article, I propose a new metric to answer the following question: when an algorithm is tuned so that it can no longer distinguish labelled cats from real cats, how often does a randomly chosen image that has been labelled as containing a cat actually contain a cat? The steps to construct this metric are as follows. First, we set a threshold score such that when the algorithm is shown two randomly-chosen images -- one that has a score greater than the threshold (i.e. a picture labelled as containing a cat) and another from those pictures that really does contain a cat -- the probability that the image with the highest score is the one chosen from the set of real cat images is 50\%. At this decision threshold, the set of positively labelled images are indistinguishable from the set of images which are positive. Then, as a second step, we measure performance by asking how often a randomly chosen picture from those labelled as containing a cat actually contains a cat. This metric can be thought of as {\it precision at the indistinguishability threshold}. While this new metric doesn't address the tradeoff between precision and recall inherent to all such metrics, I do show why this method avoids pitfalls that can occur when using, for example AUC, and it is better motivated than, for example, the F1-score.
Automated Explanation of Machine Learning Models of Footballing Actions in WordsPegah Rahimian, Jernej Flisar, David Sumpter
While football analytics has changed the way teams and analysts assess performance, there remains a communication gap between machine learning practice and how coaching staff talk about football. Coaches and practitioners require actionable insights, which are not always provided by models. To bridge this gap, we show how to build wordalizations (a novel approach that leverages large language models) for shots in football. Specifically, we first build an expected goals model using logistic regression. We then use the co-efficients of this regression model to write sentences describing how factors (such as distance, angle and defensive pressure) contribute to the model's prediction. Finally, we use large language models to give an entertaining description of the shot. We describe our approach in a model card and provide an interactive open-source application describing shots in recent tournaments. We discuss how shot wordalisations might aid communication in coaching and football commentary, and give a further example of how the same approach can be applied to other actions in football.