Chia‐Yen Lee

Simon Graham, Quoc Dang Vu, Mostafa Jahanifar et al.

Nuclear detection, segmentation and morphometric profiling are essential in helping us further understand the relationship between histology and patient outcome. To drive innovation in this area, we setup a community-wide challenge using the largest available dataset of its kind to assess nuclear segmentation and cellular composition. Our challenge, named CoNIC, stimulated the development of reproducible algorithms for cellular recognition with real-time result inspection on public leaderboards. We conducted an extensive post-challenge analysis based on the top-performing models using 1,658 whole-slide images of colon tissue. With around 700 million detected nuclei per model, associated features were used for dysplasia grading and survival analysis, where we demonstrated that the challenge's improvement over the previous state-of-the-art led to significant boosts in downstream performance. Our findings also suggest that eosinophils and neutrophils play an important role in the tumour microevironment. We release challenge models and WSI-level results to foster the development of further methods for biomarker discovery.

Yu-Hsueh Fang, Chia-Yen Lee

Online Conformal Prediction (CP) struggles to balance temporal adaptability and structural stability. Feedback-driven methods (e.g., Adaptive Conformal Inference (ACI)) suffer from systemic marginal under-coverage and high interval variance during abrupt shifts, while temporally discounted Bayesian CP suffers from severe structural lag and uncalibrated interval bloat. We propose State-Adaptive Bayesian Conformal Prediction (SA-BCP) to achieve optimal spatio-temporal decoupling. By gating long-term temporal inertia with spatial kernel-density evidence, SA-BCP proactively expands intervals for recognized historical regimes while maintaining tight efficiency during stable states. We rigorously prove this mechanism's optimality, identifying a minimax bias-variance tradeoff governed by an evidence threshold $K$. Extensive benchmarks on volatile financial datasets (2016--2026), including AMD, Gold, and GBP/USD, demonstrate that SA-BCP consistently minimizes the strictly proper Winkler score across diverse confidence levels. Specifically, SA-BCP resolves the systematic under-coverage inherent to ACI variants while simultaneously reducing the uncalibrated interval bloat of Bayesian CP by 10\% to 37\% under high-confidence requests. By elegantly navigating this tradeoff, SA-BCP achieves an optimal balance between conditional reliability and predictive efficiency.

Yu-Hsueh Fang, Chia-Yen Lee

In the field of machine learning, regression problems are pivotal due to their ability to predict continuous outcomes. Traditional error metrics like mean squared error, mean absolute error, and coefficient of determination measure model accuracy. The model accuracy is the consequence of the selected model and the features, which blurs the analysis of contribution. Predictability, in the other hand, focus on the predictable level of a target variable given a set of features. This study introduces conditional entropy estimators to assess predictability in regression problems, bridging this gap. We enhance and develop reliable conditional entropy estimators, particularly the KNIFE-P estimator and LMC-P estimator, which offer under- and over-estimation, providing a practical framework for predictability analysis. Extensive experiments on synthesized and real-world datasets demonstrate the robustness and utility of these estimators. Additionally, we extend the analysis to the coefficient of determination \(R^2 \), enhancing the interpretability of predictability. The results highlight the effectiveness of KNIFE-P and LMC-P in capturing the achievable performance and limitations of feature sets, providing valuable tools in the development of regression models. These indicators offer a robust framework for assessing the predictability for regression problems.

Chih-Chung Hsu, Chia-Yen Lee, Ting-Xuan Liao et al.

In this study, we propose a novel iterative refinement approach to predict the popularity score of the social media meta-data effectively. With the rapid growth of the social media on the Internet, how to adequately forecast the view count or popularity becomes more important. Conventionally, the ensemble approach such as random forest regression achieves high and stable performance on various prediction tasks. However, most of the regression methods may not precisely predict the extreme high or low values. To address this issue, we first predict the initial popularity score and retrieve their residues. In order to correctly compensate those extreme values, we adopt an ensemble regressor to compensate the residues to further improve the prediction performance. Comprehensive experiments are conducted to demonstrate the proposed iterative refinement approach outperforms the state-of-the-art regression approach.