Qing Wu

Qing Wu, Lixuan Chen, Ce Wang et al.

Emerging neural reconstruction techniques based on tomography (e.g., NeRF, NeAT, and NeRP) have started showing unique capabilities in medical imaging. In this work, we present a novel Polychromatic neural representation (Polyner) to tackle the challenging problem of CT imaging when metallic implants exist within the human body. CT metal artifacts arise from the drastic variation of metal's attenuation coefficients at various energy levels of the X-ray spectrum, leading to a nonlinear metal effect in CT measurements. Recovering CT images from metal-affected measurements hence poses a complicated nonlinear inverse problem where empirical models adopted in previous metal artifact reduction (MAR) approaches lead to signal loss and strongly aliased reconstructions. Polyner instead models the MAR problem from a nonlinear inverse problem perspective. Specifically, we first derive a polychromatic forward model to accurately simulate the nonlinear CT acquisition process. Then, we incorporate our forward model into the implicit neural representation to accomplish reconstruction. Lastly, we adopt a regularizer to preserve the physical properties of the CT images across different energy levels while effectively constraining the solution space. Our Polyner is an unsupervised method and does not require any external training data. Experimenting with multiple datasets shows that our Polyner achieves comparable or better performance than supervised methods on in-domain datasets while demonstrating significant performance improvements on out-of-domain datasets. To the best of our knowledge, our Polyner is the first unsupervised MAR method that outperforms its supervised counterparts. The code for this work is available at: https://github.com/iwuqing/Polyner.

Zhaojie Fang, Xiao Yu, Guanyu Zhou et al.

Ultra-Wide-Field Fluorescein Angiography (UWF-FA) enables precise identification of ocular diseases using sodium fluorescein, which can be potentially harmful. Existing research has developed methods to generate UWF-FA from Ultra-Wide-Field Scanning Laser Ophthalmoscopy (UWF-SLO) to reduce the adverse reactions associated with injections. However, these methods have been less effective in producing high-quality late-phase UWF-FA, particularly in lesion areas and fine details. Two primary challenges hinder the generation of high-quality late-phase UWF-FA: the scarcity of paired UWF-SLO and early/late-phase UWF-FA datasets, and the need for realistic generation at lesion sites and potential blood leakage regions. This study introduces an improved latent diffusion model framework to generate high-quality late-phase UWF-FA from limited paired UWF images. To address the challenges as mentioned earlier, our approach employs a module utilizing Cross-temporal Regional Difference Loss, which encourages the model to focus on the differences between early and late phases. Additionally, we introduce a low-frequency enhanced noise strategy in the diffusion forward process to improve the realism of medical images. To further enhance the mapping capability of the variational autoencoder module, especially with limited datasets, we implement a Gated Convolutional Encoder to extract additional information from conditional images. Our Latent Diffusion Model for Ultra-Wide-Field Late-Phase Fluorescein Angiography (LPUWF-LDM) effectively reconstructs fine details in late-phase UWF-FA and achieves state-of-the-art results compared to other existing methods when working with limited datasets. Our source code is available at: https://github.com/Tinysqua/****.

Qing Wu, Ruimin Feng, Hongjiang Wei et al.

In the present work, we propose a Self-supervised COordinate Projection nEtwork (SCOPE) to reconstruct the artifacts-free CT image from a single SV sinogram by solving the inverse tomography imaging problem. Compared with recent related works that solve similar problems using implicit neural representation network (INR), our essential contribution is an effective and simple re-projection strategy that pushes the tomography image reconstruction quality over supervised deep learning CT reconstruction works. The proposed strategy is inspired by the simple relationship between linear algebra and inverse problems. To solve the under-determined linear equation system, we first introduce INR to constrain the solution space via image continuity prior and achieve a rough solution. And secondly, we propose to generate a dense view sinogram that improves the rank of the linear equation system and produces a more stable CT image solution space. Our experiment results demonstrate that the re-projection strategy significantly improves the image reconstruction quality (+3 dB for PSNR at least). Besides, we integrate the recent hash encoding into our SCOPE model, which greatly accelerates the model training. Finally, we evaluate SCOPE in parallel and fan X-ray beam SVCT reconstruction tasks. Experimental results indicate that the proposed SCOPE model outperforms two latest INR-based methods and two well-popular supervised DL methods quantitatively and qualitatively.

Jie Feng, Ruimin Feng, Qing Wu et al.

Supervised Deep-Learning (DL)-based reconstruction algorithms have shown state-of-the-art results for highly-undersampled dynamic Magnetic Resonance Imaging (MRI) reconstruction. However, the requirement of excessive high-quality ground-truth data hinders their applications due to the generalization problem. Recently, Implicit Neural Representation (INR) has appeared as a powerful DL-based tool for solving the inverse problem by characterizing the attributes of a signal as a continuous function of corresponding coordinates in an unsupervised manner. In this work, we proposed an INR-based method to improve dynamic MRI reconstruction from highly undersampled k-space data, which only takes spatiotemporal coordinates as inputs. Specifically, the proposed INR represents the dynamic MRI images as an implicit function and encodes them into neural networks. The weights of the network are learned from sparsely-acquired (k, t)-space data itself only, without external training datasets or prior images. Benefiting from the strong implicit continuity regularization of INR together with explicit regularization for low-rankness and sparsity, our proposed method outperforms the compared scan-specific methods at various acceleration factors. E.g., experiments on retrospective cardiac cine datasets show an improvement of 5.5 ~ 7.1 dB in PSNR for extremely high accelerations (up to 41.6-fold). The high-quality and inner continuity of the images provided by INR has great potential to further improve the spatiotemporal resolution of dynamic MRI, without the need of any training data.

Qing Wu, Chenhe Du, Xuanyu Tian et al.

Motion correction (MoCo) in radial MRI is a particularly challenging problem due to the unpredictability of subject movement. Current state-of-the-art (SOTA) MoCo algorithms often rely on extensive high-quality MR images to pre-train neural networks, which constrains the solution space and leads to outstanding image reconstruction results. However, the need for large-scale datasets significantly increases costs and limits model generalization. In this work, we propose Moner, an unsupervised MoCo method that jointly reconstructs artifact-free MR images and estimates accurate motion from undersampled, rigid motion-corrupted k-space data, without requiring any training data. Our core idea is to leverage the continuous prior of implicit neural representation (INR) to constrain this ill-posed inverse problem, facilitating optimal solutions. Specifically, we integrate a quasi-static motion model into the INR, granting its ability to correct subject's motion. To stabilize model optimization, we reformulate radial MRI reconstruction as a back-projection problem using the Fourier-slice theorem. Additionally, we propose a novel coarse-to-fine hash encoding strategy, significantly enhancing MoCo accuracy. Experiments on multiple MRI datasets show our Moner achieves performance comparable to SOTA MoCo techniques on in-domain data, while demonstrating significant improvements on out-of-domain data. The code is available at: https://github.com/iwuqing/Moner

Ruimin Feng, Qing Wu, Jie Feng et al.

Parallel imaging is a commonly used technique to accelerate magnetic resonance imaging (MRI) data acquisition. Mathematically, parallel MRI reconstruction can be formulated as an inverse problem relating the sparsely sampled k-space measurements to the desired MRI image. Despite the success of many existing reconstruction algorithms, it remains a challenge to reliably reconstruct a high-quality image from highly reduced k-space measurements. Recently, implicit neural representation has emerged as a powerful paradigm to exploit the internal information and the physics of partially acquired data to generate the desired object. In this study, we introduced IMJENSE, a scan-specific implicit neural representation-based method for improving parallel MRI reconstruction. Specifically, the underlying MRI image and coil sensitivities were modeled as continuous functions of spatial coordinates, parameterized by neural networks and polynomials, respectively. The weights in the networks and coefficients in the polynomials were simultaneously learned directly from sparsely acquired k-space measurements, without fully sampled ground truth data for training. Benefiting from the powerful continuous representation and joint estimation of the MRI image and coil sensitivities, IMJENSE outperforms conventional image or k-space domain reconstruction algorithms. With extremely limited calibration data, IMJENSE is more stable than supervised calibrationless and calibration-based deep-learning methods. Results show that IMJENSE robustly reconstructs the images acquired at 5$\mathbf{\times}$ and 6$\mathbf{\times}$ accelerations with only 4 or 8 calibration lines in 2D Cartesian acquisitions, corresponding to 22.0% and 19.5% undersampling rates. The high-quality results and scanning specificity make the proposed method hold the potential for further accelerating the data acquisition of parallel MRI.

Jingyang Xiang, Zuohui Chen, Siqi Li et al.

Binary Neural Networks~(BNNs) have been proven to be highly effective for deploying deep neural networks on mobile and embedded platforms. Most existing works focus on minimizing quantization errors, improving representation ability, or designing gradient approximations to alleviate gradient mismatch in BNNs, while leaving the weight sign flipping, a critical factor for achieving powerful BNNs, untouched. In this paper, we investigate the efficiency of weight sign updates in BNNs. We observe that, for vanilla BNNs, over 50\% of the weights remain their signs unchanged during training, and these weights are not only distributed at the tails of the weight distribution but also universally present in the vicinity of zero. We refer to these weights as ``silent weights'', which slow down convergence and lead to a significant accuracy degradation. Theoretically, we reveal this is due to the independence of the BNNs gradient from the latent weight distribution. To address the issue, we propose Overcome Silent Weights~(OvSW). OvSW first employs Adaptive Gradient Scaling~(AGS) to establish a relationship between the gradient and the latent weight distribution, thereby improving the overall efficiency of weight sign updates. Additionally, we design Silence Awareness Decaying~(SAD) to automatically identify ``silent weights'' by tracking weight flipping state, and apply an additional penalty to ``silent weights'' to facilitate their flipping. By efficiently updating weight signs, our method achieves faster convergence and state-of-the-art performance on CIFAR10 and ImageNet1K dataset with various architectures. For example, OvSW obtains 61.6\% and 65.5\% top-1 accuracy on the ImageNet1K using binarized ResNet18 and ResNet34 architecture respectively. Codes are available at \url{https://github.com/JingyangXiang/OvSW}.

Chenhe Du, Qing Wu, Xuanyu Tian et al.

3D medical imaging is in high demand and essential for clinical diagnosis and scientific research. Currently, diffusion models (DMs) have become an effective tool for medical imaging reconstruction thanks to their ability to learn rich, high-quality data priors. However, learning the 3D data distribution with DMs in medical imaging is challenging, not only due to the difficulties in data collection but also because of the significant computational burden during model training. A common compromise is to train the DMs on 2D data priors and reconstruct stacked 2D slices to address 3D medical inverse problems. However, the intrinsic randomness of diffusion sampling causes severe inter-slice discontinuities of reconstructed 3D volumes. Existing methods often enforce continuity regularizations along the z-axis, which introduces sensitive hyper-parameters and may lead to over-smoothing results. In this work, we revisit the origin of stochasticity in diffusion sampling and introduce Inter-Slice Consistent Stochasticity (ISCS), a simple yet effective strategy that encourages interslice consistency during diffusion sampling. Our key idea is to control the consistency of stochastic noise components during diffusion sampling, thereby aligning their sampling trajectories without adding any new loss terms or optimization steps. Importantly, the proposed ISCS is plug-and-play and can be dropped into any 2D trained diffusion based 3D reconstruction pipeline without additional computational cost. Experiments on several medical imaging problems show that our method can effectively improve the performance of medical 3D imaging problems based on 2D diffusion models. Our findings suggest that controlling inter-slice stochasticity is a principled and practically attractive route toward high-fidelity 3D medical imaging with 2D diffusion priors. The code is available at: https://github.com/duchenhe/ISCS

Xuanyu Tian, Qing Wu, Hongjiang Wei et al.

Fluorescence microscopy is a key driver to promote discoveries of biomedical research. However, with the limitation of microscope hardware and characteristics of the observed samples, the fluorescence microscopy images are susceptible to noise. Recently, a few self-supervised deep learning (DL) denoising methods have been proposed. However, the training efficiency and denoising performance of existing methods are relatively low in real scene noise removal. To address this issue, this paper proposed self-supervised image denoising method Noise2SR (N2SR) to train a simple and effective image denoising model based on single noisy observation. Our Noise2SR denoising model is designed for training with paired noisy images of different dimensions. Benefiting from this training strategy, Noise2SR is more efficiently self-supervised and able to restore more image details from a single noisy observation. Experimental results of simulated noise and real microscopy noise removal show that Noise2SR outperforms two blind-spot based self-supervised deep learning image denoising methods. We envision that Noise2SR has the potential to improve more other kind of scientific imaging quality.

Qing Wu, Xin Li, Hongjiang Wei et al.

Neural Radiance Field (NeRF) has widely received attention in Sparse-View Computed Tomography (SVCT) reconstruction tasks as a self-supervised deep learning framework. NeRF-based SVCT methods represent the desired CT image as a continuous function of spatial coordinates and train a Multi-Layer Perceptron (MLP) to learn the function by minimizing loss on the SV sinogram. Benefiting from the continuous representation provided by NeRF, the high-quality CT image can be reconstructed. However, existing NeRF-based SVCT methods strictly suppose there is completely no relative motion during the CT acquisition because they require \textit{accurate} projection poses to model the X-rays that scan the SV sinogram. Therefore, these methods suffer from severe performance drops for real SVCT imaging with motion. In this work, we propose a self-calibrating neural field to recover the artifacts-free image from the rigid motion-corrupted SV sinogram without using any external data. Specifically, we parametrize the inaccurate projection poses caused by rigid motion as trainable variables and then jointly optimize these pose variables and the MLP. We conduct numerical experiments on a public CT image dataset. The results indicate our model significantly outperforms two representative NeRF-based methods for SVCT reconstruction tasks with four different levels of rigid motion.

Ruimin Feng, Qing Wu, Yuyao Zhang et al.

Parallel imaging is a widely-used technique to accelerate magnetic resonance imaging (MRI). However, current methods still perform poorly in reconstructing artifact-free MRI images from highly undersampled k-space data. Recently, implicit neural representation (INR) has emerged as a new deep learning paradigm for learning the internal continuity of an object. In this study, we adopted INR to parallel MRI reconstruction. The MRI image was modeled as a continuous function of spatial coordinates. This function was parameterized by a neural network and learned directly from the measured k-space itself without additional fully sampled high-quality training data. Benefitting from the powerful continuous representations provided by INR, the proposed method outperforms existing methods by suppressing the aliasing artifacts and noise, especially at higher acceleration rates and smaller sizes of the auto-calibration signals. The high-quality results and scanning specificity make the proposed method hold the potential for further accelerating the data acquisition of parallel MRI.

Lixuan Chen, Jiangjie Wu, Qing Wu et al.

Longitudinal fetal brain atlas is a powerful tool for understanding and characterizing the complex process of fetus brain development. Existing fetus brain atlases are typically constructed by averaged brain images on discrete time points independently over time. Due to the differences in onto-genetic trends among samples at different time points, the resulting atlases suffer from temporal inconsistency, which may lead to estimating error of the brain developmental characteristic parameters along the timeline. To this end, we proposed a multi-stage deep-learning framework to tackle the time inconsistency issue as a 4D (3D brain volume + 1D age) image data denoising task. Using implicit neural representation, we construct a continuous and noise-free longitudinal fetus brain atlas as a function of the 4D spatial-temporal coordinate. Experimental results on two public fetal brain atlases (CRL and FBA-Chinese atlases) show that the proposed method can significantly improve the atlas temporal consistency while maintaining good fetus brain structure representation. In addition, the continuous longitudinal fetus brain atlases can also be extensively applied to generate finer 4D atlases in both spatial and temporal resolution.

Hongyu Ding, Yuanze Tang, Qing Wu et al.

Goal-conditioned reinforcement learning (RL) is an interesting extension of the traditional RL framework, where the dynamic environment and reward sparsity can cause conventional learning algorithms to fail. Reward shaping is a practical approach to improving sample efficiency by embedding human domain knowledge into the learning process. Existing reward shaping methods for goal-conditioned RL are typically built on distance metrics with a linear and isotropic distribution, which may fail to provide sufficient information about the ever-changing environment with high complexity. This paper proposes a novel magnetic field-based reward shaping (MFRS) method for goal-conditioned RL tasks with dynamic target and obstacles. Inspired by the physical properties of magnets, we consider the target and obstacles as permanent magnets and establish the reward function according to the intensity values of the magnetic field generated by these magnets. The nonlinear and anisotropic distribution of the magnetic field intensity can provide more accessible and conducive information about the optimization landscape, thus introducing a more sophisticated magnetic reward compared to the distance-based setting. Further, we transform our magnetic reward to the form of potential-based reward shaping by learning a secondary potential function concurrently to ensure the optimal policy invariance of our method. Experiments results in both simulated and real-world robotic manipulation tasks demonstrate that MFRS outperforms relevant existing methods and effectively improves the sample efficiency of RL algorithms in goal-conditioned tasks with various dynamics of the target and obstacles.

Lingdong Kong, Xian Sun, Wei Chow et al.

AI-assisted research is crossing a threshold: fully automated systems can now generate research papers for as little as $15, while long-horizon agents can execute experiments, draft manuscripts, and simulate critique with minimal human input. Yet this productivity frontier exposes a deeper integrity problem: under scientific pressure, even frontier LLMs still fabricate results, miss hidden errors, and fail to judge novelty reliably. Studying developments through April 2026, we present an end-to-end analysis of AI across the complete research lifecycle, organized into four epistemological phases: Creation (idea generation, literature review, coding & experiments, tables & figures), Writing (paper writing), Validation (peer review, rebuttal & revision), and Dissemination (posters, slides, videos, social media, project pages, and interactive agents). We identify a sharp, stage-dependent boundary between reliable assistance and unreliable autonomy: AI excels at structured, retrieval-grounded, and tool-mediated tasks, but remains fragile for genuinely novel ideas, research-level experiments, and scientific judgment. Generated ideas often degrade after implementation, research code lags far behind pattern-matching benchmarks, and end-to-end autonomous systems have not yet consistently reached major-venue acceptance standards. We further show that greater automation can obscure rather than eliminate failure modes, making human-governed collaboration the most credible deployment paradigm. Finally, we provide a structured taxonomy, benchmark suite, and tool inventory, cross-stage design principles, and a practitioner-oriented playbook, with resources maintained at our project page.

Zhanyun Lu, Renshu Gu, Huimin Cheng et al.

Medical image datasets in the real world are often unlabeled and imbalanced, and Semi-Supervised Object Detection (SSOD) can utilize unlabeled data to improve an object detector. However, existing approaches predominantly assumed that the unlabeled data and test data do not contain out-of-distribution (OOD) classes. The few open-set semi-supervised object detection methods have two weaknesses: first, the class imbalance is not considered; second, the OOD instances are distinguished and simply discarded during pseudo-labeling. In this paper, we consider the open-set semi-supervised object detection problem which leverages unlabeled data that contain OOD classes to improve object detection for medical images. Our study incorporates two key innovations: Category Control Embed (CCE) and out-of-distribution Detection Fusion Classifier (OODFC). CCE is designed to tackle dataset imbalance by constructing a Foreground information Library, while OODFC tackles open-set challenges by integrating the ``unknown'' information into basic pseudo-labels. Our method outperforms the state-of-the-art SSOD performance, achieving a 4.25 mAP improvement on the public Parasite dataset.

Chenhe Du, Xuanyu Tian, Qing Wu et al.

Plug-and-Play diffusion prior (PnPDP) frameworks have emerged as a powerful paradigm for solving imaging inverse problems by treating pretrained generative models as modular priors. However, we identify a critical flaw in prevailing PnP solvers (e.g., based on HQS or Proximal Gradient): they function as memoryless operators, updating estimates solely based on instantaneous gradients. This lack of historical tracking inevitably leads to non-vanishing steady-state bias, where the reconstruction fails to strictly satisfy physical measurements under heavy corruption. To resolve this, we propose Dual-Coupled PnP Diffusion, which restores the classical dual variable to provide integral feedback, theoretically guaranteeing asymptotic convergence to the exact data manifold. However, this rigorous geometric coupling introduces a secondary challenge: the accumulated dual residuals exhibit spectrally colored, structured artifacts that violate the Additive White Gaussian Noise (AWGN) assumption of diffusion priors, causing severe hallucinations. To bridge this gap, we introduce Spectral Homogenization (SH), a frequency-domain adaptation mechanism that modulates these structured residuals into statistically compliant pseudo-AWGN inputs. This effectively aligns the solver's rigorous optimization trajectory with the denoiser's valid statistical manifold. Extensive experiments on CT and MRI reconstruction demonstrate that our approach resolves the bias-hallucination trade-off, achieving state-of-the-art fidelity with significantly accelerated convergence.

Muyu Liu, Chenhe Du, Xuanyu Tian et al.

Low-field (LF) magnetic resonance imaging (MRI) democratizes access to diagnostic imaging but is fundamentally limited by low signal-to-noise ratio and significant tissue contrast distortion due to field-dependent relaxation dynamics. Reconstructing high-field (HF) quality images from LF data is a blind inverse problem, severely challenged by the scarcity of paired training data and the unknown, non-linear contrast transformation operator. Existing zero-shot methods, which assume simplified linear degradation, often fail to recover authentic tissue contrast. In this paper, we propose DACT(Diffusion-Based Adaptive Contrast Transport), a novel zero-shot framework that restores HF-quality images without paired supervision. DACT synergizes a pre-trained HF diffusion prior to ensure anatomical fidelity with a physically-informed adaptive forward model. Specifically, we introduce a differentiable Sinkhorn optimal transport module that explicitly models and corrects the intensity distribution shift between LF and HF domains during the reverse diffusion process. This allows the framework to dynamically learn the intractable contrast mapping while preserving topological consistency. Extensive experiments on simulated and real clinical LF datasets demonstrate that DACT achieves state-of-the-art performance, yielding reconstructions with superior structural detail and correct tissue contrast.

Muyu Liu, Xuanyu Tian, Chenhe Du et al.

Recovering radiometric fidelity from unknown dynamic range compression (UDRC), such as low-light enhancement and HDR reconstruction, is a challenging blind inverse problem, due to the unknown forward model and irreversible information loss introduced by compression. To address this challenge, we first identify monotonicity as the fundamental physical invariant shared across UDRC tasks. Leveraging this insight, we introduce the \textbf{cascaded monotonic Bernstein} (CaMB) operator to parameterize the unknown forward model. CaMB enforces monotonicity as a hard architectural inductive bias, constraining optimization to physically consistent mappings and enabling robust and stable operator estimation. We further integrate CaMB with a plug-and-play diffusion framework, proposing \textbf{CaMB-Diff}. Within this framework, the diffusion model serves as a powerful geometric prior for structural and semantic recovery, while CaMB explicitly models and corrects radiometric distortions through a physically grounded forward operator. Extensive experiments on a variety of zero-shot UDRC tasks, including low-light enhancement, low-field MRI enhancement, and HDR reconstruction, demonstrate that CaMB-Diff significantly outperforms state-of-the-art zero-shot baselines in terms of both signal fidelity and physical consistency. Moreover, we empirically validate the effectiveness of the proposed CaMB parameterization in accurately modeling the unknown forward operator.

Xuanyu Tian, Lixuan Chen, Qing Wu et al.

Cardiac magnetic resonance (CMR) imaging is widely used to characterize cardiac morphology and function. To accelerate CMR imaging, various methods have been proposed to recover high-quality spatiotemporal CMR images from highly undersampled k-t space data. However, current CMR reconstruction techniques either fail to achieve satisfactory image quality or are restricted by the scarcity of ground truth data, leading to limited applicability in clinical scenarios. In this work, we proposed MoCo-INR, a new unsupervised method that integrates implicit neural representations (INR) with the conventional motion-compensated (MoCo) framework. Using explicit motion modeling and the continuous prior of INRs, MoCo-INR can produce accurate cardiac motion decomposition and high-quality CMR reconstruction. Furthermore, we introduce a new INR network architecture tailored to the CMR problem, which significantly stabilizes model optimization. Experiments on retrospective (simulated) datasets demonstrate the superiority of MoCo-INR over state-of-the-art methods, achieving fast convergence and fine-detailed reconstructions at ultra-high acceleration factors (e.g., 20x in VISTA sampling). Additionally, evaluations on prospective (real-acquired) free-breathing CMR scans highlight the clinical practicality of MoCo-INR for real-time imaging. Several ablation studies further confirm the effectiveness of the critical components of MoCo-INR.

Xuanyu Tian, Lixuan Chen, Qing Wu et al.

Emerging unsupervised implicit neural representation (INR) methods, such as NeRP, NeAT, and SCOPE, have shown great potential to address sparse-view computed tomography (SVCT) inverse problems. Although these INR-based methods perform well in relatively dense SVCT reconstructions, they struggle to achieve comparable performance to supervised methods in sparser SVCT scenarios. They are prone to being affected by noise, limiting their applicability in real clinical settings. Additionally, current methods have not fully explored the use of image domain priors for solving SVCsT inverse problems. In this work, we demonstrate that imperfect reconstruction results can provide effective image domain priors for INRs to enhance performance. To leverage this, we introduce Self-prior embedding neural representation (Spener), a novel unsupervised method for SVCT reconstruction that integrates iterative reconstruction algorithms. During each iteration, Spener extracts local image prior features from the previous iteration and embeds them to constrain the solution space. Experimental results on multiple CT datasets show that our unsupervised Spener method achieves performance comparable to supervised state-of-the-art (SOTA) methods on in-domain data while outperforming them on out-of-domain datasets. Moreover, Spener significantly improves the performance of INR-based methods in handling SVCT with noisy sinograms. Our code is available at https://github.com/MeijiTian/Spener.

Yunhui Liu, Tieke He, Qing Wu et al.

Attributed graph clustering, which aims to group the nodes of an attributed graph into disjoint clusters, has made promising advancements in recent years. However, most existing methods face challenges when applied to large graphs due to the expensive computational cost and high memory usage. In this paper, we introduce Scalable and Adaptive Spectral Embedding (SASE), a simple attributed graph clustering method devoid of parameter learning. SASE comprises three main components: node features smoothing via $k$-order simple graph convolution, scalable spectral clustering using random Fourier features, and adaptive order selection. With these designs, SASE not only effectively captures global cluster structures but also exhibits linear time and space complexity relative to the graph size. Empirical results demonstrate the superiority of SASE. For example, on the ArXiv dataset with 169K nodes and 1.17M edges, SASE achieves a 6.9\% improvement in ACC and a $5.87\times$ speedup compared to the runner-up, S3GC.

Qing Wu, Xuanyu Tian, Chenhe Du et al.

Implicit neural representations (INRs) have emerged as a powerful paradigm for medical imaging via physics-informed unsupervised learning. Classical INRs optimize an entire network from scratch for each subject, leading to inefficient training and suboptimal imaging quality. Recent initialization-based approaches attempt to inject population priors into pre-trained networks, yet they rely on high-quality images and often suffer from catastrophic forgetting during fine-tuning. We present DisINR, a novel INR framework that explicitly disentangles shared and subject-specific representations. DisINR introduces a shared encoder-decoder pair and subject-specific encoders, whose features are jointly decoded for image reconstruction. By integrating differentiable forward models, it pre-trains the shared modules directly from limited raw measurements, removing the need for pre-acquired high-quality images. During test-time adaptation, only the subject-specific encoder is optimized, while the shared pair remains frozen, effectively preserving learned priors. Extensive evaluations on three representative medical imaging tasks show that DisINR significantly outperforms state-of-the-art INRs in both reconstruction accuracy and efficiency.

Xinlei Yu, Ahmed Elazab, Ruiquan Ge et al.

Intracerebral hemorrhage (ICH) is the most fatal subtype of stroke and is characterized by a high incidence of disability. Accurate segmentation of the ICH region and prognosis prediction are critically important for developing and refining treatment plans for post-ICH patients. However, existing approaches address these two tasks independently and predominantly focus on imaging data alone, thereby neglecting the intrinsic correlation between the tasks and modalities. This paper introduces a multi-task network, ICH-SCNet, designed for both ICH segmentation and prognosis classification. Specifically, we integrate a SAM-CLIP cross-modal interaction mechanism that combines medical text and segmentation auxiliary information with neuroimaging data to enhance cross-modal feature recognition. Additionally, we develop an effective feature fusion module and a multi-task loss function to improve performance further. Extensive experiments on an ICH dataset reveal that our approach surpasses other state-of-the-art methods. It excels in the overall performance of classification tasks and outperforms competing models in all segmentation task metrics.

Chenhe Du, Xiyue Lin, Qing Wu et al.

Limited-angle and sparse-view computed tomography (LACT and SVCT) are crucial for expanding the scope of X-ray CT applications. However, they face challenges due to incomplete data acquisition, resulting in diverse artifacts in the reconstructed CT images. Emerging implicit neural representation (INR) techniques, such as NeRF, NeAT, and NeRP, have shown promise in under-determined CT imaging reconstruction tasks. However, the unsupervised nature of INR architecture imposes limited constraints on the solution space, particularly for the highly ill-posed reconstruction task posed by LACT and ultra-SVCT. In this study, we introduce the Diffusion Prior Driven Neural Representation (DPER), an advanced unsupervised framework designed to address the exceptionally ill-posed CT reconstruction inverse problems. DPER adopts the Half Quadratic Splitting (HQS) algorithm to decompose the inverse problem into data fidelity and distribution prior sub-problems. The two sub-problems are respectively addressed by INR reconstruction scheme and pre-trained score-based diffusion model. This combination first injects the implicit image local consistency prior from INR. Additionally, it effectively augments the feasibility of the solution space for the inverse problem through the generative diffusion model, resulting in increased stability and precision in the solutions. We conduct comprehensive experiments to evaluate the performance of DPER on LACT and ultra-SVCT reconstruction with two public datasets (AAPM and LIDC), an in-house clinical COVID-19 dataset and a public raw projection dataset created by Mayo Clinic. The results show that our method outperforms the state-of-the-art reconstruction methods on in-domain datasets, while achieving significant performance improvements on out-of-domain (OOD) datasets.

Qing Wu, Xu Guo, Lixuan Chen et al.

X-ray CT often suffers from shadowing and streaking artifacts in the presence of metallic materials, which severely degrade imaging quality. Physically, the linear attenuation coefficients (LACs) of metals vary significantly with X-ray energy, causing a nonlinear beam hardening effect (BHE) in CT measurements. Reconstructing CT images from metal-corrupted measurements consequently becomes a challenging nonlinear inverse problem. Existing state-of-the-art (SOTA) metal artifact reduction (MAR) algorithms rely on supervised learning with numerous paired CT samples. While promising, these supervised methods often assume that the unknown LACs are energy-independent, ignoring the energy-induced BHE, which results in limited generalization. Moreover, the requirement for large datasets also limits their applications in real-world scenarios. In this work, we propose Density neural representation (Diner), a novel unsupervised MAR method. Our key innovation lies in formulating MAR as an energy-independent density reconstruction problem that strictly adheres to the photon-tissue absorption physical model. This model is inherently nonlinear and complex, making it a rarely considered approach in inverse imaging problems. By introducing the water-equivalent tissues approximation and a new polychromatic model to characterize the nonlinear CT acquisition process, we directly learn the neural representation of the density map from raw measurements without using external training data. This energy-independent density reconstruction framework fundamentally resolves the nonlinear BHE, enabling superior MAR performance across a wide range of scanning scenarios. Extensive experiments on both simulated and real-world datasets demonstrate the superiority of our unsupervised Diner over popular supervised methods in terms of MAR performance and robustness.

Qing Wu, Hongjiang Wei, Jingyi Yu et al.

Ring artifacts are prevalent in 3D cone-beam computed tomography (CBCT) due to non-ideal responses of X-ray detectors, substantially affecting image quality and diagnostic reliability. Existing state-of-the-art (SOTA) ring artifact reduction (RAR) methods rely on supervised learning with large-scale paired CT datasets. While effective in-domain, supervised methods tend to struggle to fully capture the physical characteristics of ring artifacts, leading to pronounced performance drops in complex real-world acquisitions. Moreover, their scalability to 3D CBCT is limited by high memory demands. In this work, we propose Riner, a new unsupervised RAR method. Based on a theoretical analysis of ring artifact formation, we reformulate RAR as a multi-parameter inverse problem, where the non-ideal responses of X-ray detectors are parameterized as solvable physical variables. Using a new differentiable forward model, Riner can jointly learn the implicit neural representation of artifact-free images and estimate the physical parameters directly from CT measurements, without external training data. Additionally, Riner is memory-friendly due to its ray-based optimization, enhancing its usability in large-scale 3D CBCT. Experiments on both simulated and real-world datasets show Riner outperforms existing SOTA supervised methods.

Weichen Dai, Yuxuan Huang, Li Zhu et al.

Humans possess a remarkable capacity for spatial cognition, allowing for self-localization even in novel or unfamiliar environments. While hippocampal neurons encoding position and orientation are well documented, the large-scale neural dynamics supporting spatial representation, particularly during naturalistic, passive experience, remain poorly understood. Here, we demonstrate for the first time that non-invasive brain-computer interfaces (BCIs) based on electroencephalography (EEG) can decode spontaneous, fine-grained egocentric 6D pose, comprising three-dimensional position and orientation, during passive viewing of egocentric video. Despite EEG's limited spatial resolution and high signal noise, we find that spatially coherent visual input (i.e., continuous and structured motion) reliably evokes decodable spatial representations, aligning with participants' subjective sense of spatial engagement. Decoding performance further improves when visual input is presented at a frame rate of 100 ms per image, suggesting alignment with intrinsic neural temporal dynamics. Using gradient-based backpropagation through a neural decoding model, we identify distinct EEG channels contributing to position -- and orientation specific -- components, revealing a distributed yet complementary neural encoding scheme. These findings indicate that the brain's spatial systems operate spontaneously and continuously, even under passive conditions, challenging traditional distinctions between active and passive spatial cognition. Our results offer a non-invasive window into the automatic construction of egocentric spatial maps and advance our understanding of how the human mind transforms everyday sensory experience into structured internal representations.

Qing Wu, Hongjiang Wei, Jingyi Yu et al.

Multi-material decomposition (MMD) enables quantitative reconstruction of tissue compositions in the human body, supporting a wide range of clinical applications. However, traditional MMD typically requires spectral CT scanners and pre-measured X-ray energy spectra, significantly limiting clinical applicability. To this end, various methods have been developed to perform MMD using conventional (i.e., single-energy, SE) CT systems, commonly referred to as SEMMD. Despite promising progress, most SEMMD methods follow a two-step image decomposition pipeline, which first reconstructs monochromatic CT images using algorithms such as FBP, and then performs decomposition on these images. The initial reconstruction step, however, neglects the energy-dependent attenuation of human tissues, introducing severe nonlinear beam hardening artifacts and noise into the subsequent decomposition. This paper proposes JSover, a fundamentally reformulated one-step SEMMD framework that jointly reconstructs multi-material compositions and estimates the energy spectrum directly from SECT projections. By explicitly incorporating physics-informed spectral priors into the SEMMD process, JSover accurately simulates a virtual spectral CT system from SE acquisitions, thereby improving the reliability and accuracy of decomposition. Furthermore, we introduce implicit neural representation (INR) as an unsupervised deep learning solver for representing the underlying material maps. The inductive bias of INR toward continuous image patterns constrains the solution space and further enhances estimation quality. Extensive experiments on both simulated and real CT datasets show that JSover outperforms state-of-the-art SEMMD methods in accuracy and computational efficiency.

Qing Wu

3D semantic segmentation is one of the most crucial tasks in driving perception. The ability of a learning-based model to accurately perceive dense 3D surroundings often ensures the safe operation of autonomous vehicles. However, existing LiDAR-based 3D semantic segmentation databases consist of sequentially acquired LiDAR scans that are long-tailed and lack training diversity. In this report, we introduce MixSeg3D, a sophisticated combination of the strong point cloud segmentation model with advanced 3D data mixing strategies. Specifically, our approach integrates the MinkUNet family with LaserMix and PolarMix, two scene-scale data augmentation methods that blend LiDAR point clouds along the ego-scene's inclination and azimuth directions. Through empirical experiments, we demonstrate the superiority of MixSeg3D over the baseline and prior arts. Our team achieved 2nd place in the 3D semantic segmentation track of the 2024 Waymo Open Dataset Challenge.

Haonan Zhang, Yuhan Zhang, Qing Wu et al.

In this paper, we propose an efficient self-supervised arbitrary-scale super-resolution (SR) framework to reconstruct isotropic magnetic resonance (MR) images from anisotropic MRI inputs without involving external training data. The proposed framework builds a training dataset using in-the-wild anisotropic MR volumes with arbitrary image resolution. We then formulate the 3D volume SR task as a SR problem for 2D image slices. The anisotropic volume's high-resolution (HR) plane is used to build the HR-LR image pairs for model training. We further adapt the implicit neural representation (INR) network to implement the 2D arbitrary-scale image SR model. Finally, we leverage the well-trained proposed model to up-sample the 2D LR plane extracted from the anisotropic MR volumes to their HR views. The isotropic MR volumes thus can be reconstructed by stacking and averaging the generated HR slices. Our proposed framework has two major advantages: (1) It only involves the arbitrary-resolution anisotropic MR volumes, which greatly improves the model practicality in real MR imaging scenarios (e.g., clinical brain image acquisition); (2) The INR-based SR model enables arbitrary-scale image SR from the arbitrary-resolution input image, which significantly improves model training efficiency. We perform experiments on a simulated public adult brain dataset and a real collected 7T brain dataset. The results indicate that our current framework greatly outperforms two well-known self-supervised models for anisotropic MR image SR tasks.

Qing Wu, Yuwei Li, Yawen Sun et al.

High Resolution (HR) medical images provide rich anatomical structure details to facilitate early and accurate diagnosis. In MRI, restricted by hardware capacity, scan time, and patient cooperation ability, isotropic 3D HR image acquisition typically requests long scan time and, results in small spatial coverage and low SNR. Recent studies showed that, with deep convolutional neural networks, isotropic HR MR images could be recovered from low-resolution (LR) input via single image super-resolution (SISR) algorithms. However, most existing SISR methods tend to approach a scale-specific projection between LR and HR images, thus these methods can only deal with a fixed up-sampling rate. For achieving different up-sampling rates, multiple SR networks have to be built up respectively, which is very time-consuming and resource-intensive. In this paper, we propose ArSSR, an Arbitrary Scale Super-Resolution approach for recovering 3D HR MR images. In the ArSSR model, the reconstruction of HR images with different up-scaling rates is defined as learning a continuous implicit voxel function from the observed LR images. Then the SR task is converted to represent the implicit voxel function via deep neural networks from a set of paired HR-LR training examples. The ArSSR model consists of an encoder network and a decoder network. Specifically, the convolutional encoder network is to extract feature maps from the LR input images and the fully-connected decoder network is to approximate the implicit voxel function. Due to the continuity of the learned function, a single ArSSR model can achieve arbitrary up-sampling rate reconstruction of HR images from any input LR image after training. Experimental results on three datasets show that the ArSSR model can achieve state-of-the-art SR performance for 3D HR MR image reconstruction while using a single trained model to achieve arbitrary up-sampling scales.

Qing Wu, Yuwei Li, Lan Xu et al.

For collecting high-quality high-resolution (HR) MR image, we propose a novel image reconstruction network named IREM, which is trained on multiple low-resolution (LR) MR images and achieve an arbitrary up-sampling rate for HR image reconstruction. In this work, we suppose the desired HR image as an implicit continuous function of the 3D image spatial coordinate and the thick-slice LR images as several sparse discrete samplings of this function. Then the super-resolution (SR) task is to learn the continuous volumetric function from a limited observations using an fully-connected neural network combined with Fourier feature positional encoding. By simply minimizing the error between the network prediction and the acquired LR image intensity across each imaging plane, IREM is trained to represent a continuous model of the observed tissue anatomy. Experimental results indicate that IREM succeeds in representing high frequency image feature, and in real scene data collection, IREM reduces scan time and achieves high-quality high-resolution MR imaging in terms of SNR and local image detail.

Sundar Shrestha, Anand Koirala, Maksym Spiryagin et al.

The surface roughness between the wheel and rail has a huge influence on rolling noise level. The presence of the third body such as frost or grease at wheel-rail interface contributes towards change in adhesion coefficient resulting in the generation of noise at various levels. Therefore, it is possible to estimate adhesion conditions between the wheel and rail from the analysis of noise patterns originating from wheel-rail interaction. In this study, a new approach to estimate adhesion condition is proposed which takes rolling noise as input.

Zhilin Yu, Chao Wang, Xin Wang et al.

Modern deep neural networks rely on overparameterization to achieve state-of-the-art generalization. But overparameterized models are computationally expensive. Network pruning is often employed to obtain less demanding models for deployment. Fine-grained pruning removes individual weights in parameter tensors and can achieve a high model compression ratio with little accuracy degradation. However, it introduces irregularity into the computing dataflow and often does not yield improved model inference efficiency in practice. Coarse-grained model pruning, while realizing satisfactory inference speedup through removal of network weights in groups, e.g. an entire filter, often lead to significant accuracy degradation. This work introduces the cross-channel intragroup (CCI) sparsity structure, which can prevent the inference inefficiency of fine-grained pruning while maintaining outstanding model performance. We then present a novel training algorithm designed to perform well under the constraint imposed by the CCI-Sparsity. Through a series of comparative experiments we show that our proposed CCI-Sparsity structure and the corresponding pruning algorithm outperform prior art in inference efficiency by a substantial margin given suited hardware acceleration in the future.

Zhiming Li, Qing Wu, Kun Qian

Reverse Engineering(RE) has been a fundamental task in software engineering. However, most of the traditional Java reverse engineering tools are strictly rule defined, thus are not fault-tolerant, which pose serious problem when noise and interference were introduced into the system. In this paper, we view reverse engineering as a statistical machine translation task instead of rule-based task, and propose a fault-tolerant Java decompiler based on machine translation models. Our model is based on attention-based Neural Machine Translation (NMT) and Transformer architectures. First, we measure the translation quality on both the redundant and purified datasets. Next, we evaluate the fault-tolerance(anti-noise ability) of our framework on test sets with different unit error probability (UEP). In addition, we compare the suitability of different word segmentation algorithms for decompilation task. Experimental results demonstrate that our model is more robust and fault-tolerant compared to traditional Abstract Syntax Tree (AST) based decompilers. Specifically, in terms of BLEU-4 and Word Error Rate (WER), our performance has reached 94.50% and 2.65% on the redundant test set; 92.30% and 3.48% on the purified test set.

Zhongping Ji, Xiao Qi, Yigang Wang et al.

3D content creation is referred to as one of the most fundamental tasks of computer graphics. And many 3D modeling algorithms from 2D images or curves have been developed over the past several decades. Designers are allowed to align some conceptual images or sketch some suggestive curves, from front, side, and top views, and then use them as references in constructing a 3D model automatically or manually. However, to the best of our knowledge, no studies have investigated on 3D human body reconstruction in a similar manner. In this paper, we propose a deep learning based reconstruction of 3D human body shape from 2D orthographic views. A novel CNN-based regression network, with two branches corresponding to frontal and lateral views respectively, is designed for estimating 3D human body shape from 2D mask images. We train our networks separately to decouple the feature descriptors which encode the body parameters from different views, and fuse them to estimate an accurate human body shape. In addition, to overcome the shortage of training data required for this purpose, we propose some significantly data augmentation schemes for 3D human body shapes, which can be used to promote further research on this topic. Extensive experimen- tal results demonstrate that visually realistic and accurate reconstructions can be achieved effectively using our algorithm. Requiring only binary mask images, our method can help users create their own digital avatars quickly, and also make it easy to create digital human body for 3D game, virtual reality, online fashion shopping.

Xiaoran Xu, Chunrong Fang, Qing Wu et al.

Software testing is an expensive and important task. Plenty of researches and industrial efforts have been invested on improving software testing techniques, including criteria, tools, etc. These studies can provide guidelines to select suitable test techniques for software engineers. However, in some engineering projects, business issues may be more important than technical ones, hence we need to lobby non-technical members to support our decisions. In this paper, a well-known investment model, Nelson-Siegel model, is introduced to evaluate and forecast the processes of testing with different testing criteria. Through this model, we provide a new perspective to understand short-term, medium-term, and long-term returns of investments throughout the process of testing. A preliminary experiment is conducted to investigate three testing criteria from the viewpoint of investments. The results show that statement-coverage criterion performs best in gaining long-term yields; the short-term and medium-term yields of testing depend on the scale of programs and the number of faults they contain.

Chang Song, Hsin-Pai Cheng, Huanrui Yang et al.

Some recent works revealed that deep neural networks (DNNs) are vulnerable to so-called adversarial attacks where input examples are intentionally perturbed to fool DNNs. In this work, we revisit the DNN training process that includes adversarial examples into the training dataset so as to improve DNN's resilience to adversarial attacks, namely, adversarial training. Our experiments show that different adversarial strengths, i.e., perturbation levels of adversarial examples, have different working zones to resist the attack. Based on the observation, we propose a multi-strength adversarial training method (MAT) that combines the adversarial training examples with different adversarial strengths to defend adversarial attacks. Two training structures - mixed MAT and parallel MAT - are developed to facilitate the tradeoffs between training time and memory occupation. Our results show that MAT can substantially minimize the accuracy degradation of deep learning systems to adversarial attacks on MNIST, CIFAR-10, CIFAR-100, and SVHN.

Chaofei Yang, Qing Wu, Hai Li et al.

Poisoning attack is identified as a severe security threat to machine learning algorithms. In many applications, for example, deep neural network (DNN) models collect public data as the inputs to perform re-training, where the input data can be poisoned. Although poisoning attack against support vector machines (SVM) has been extensively studied before, there is still very limited knowledge about how such attack can be implemented on neural networks (NN), especially DNNs. In this work, we first examine the possibility of applying traditional gradient-based method (named as the direct gradient method) to generate poisoned data against NNs by leveraging the gradient of the target model w.r.t. the normal data. We then propose a generative method to accelerate the generation rate of the poisoned data: an auto-encoder (generator) used to generate poisoned data is updated by a reward function of the loss, and the target NN model (discriminator) receives the poisoned data to calculate the loss w.r.t. the normal data. Our experiment results show that the generative method can speed up the poisoned data generation rate by up to 239.38x compared with the direct gradient method, with slightly lower model accuracy degradation. A countermeasure is also designed to detect such poisoning attack methods by checking the loss of the target model.

Wei Wen, Chunpeng Wu, Yandan Wang et al.

IBM TrueNorth chip uses digital spikes to perform neuromorphic computing and achieves ultrahigh execution parallelism and power efficiency. However, in TrueNorth chip, low quantization resolution of the synaptic weights and spikes significantly limits the inference (e.g., classification) accuracy of the deployed neural network model. Existing workaround, i.e., averaging the results over multiple copies instantiated in spatial and temporal domains, rapidly exhausts the hardware resources and slows down the computation. In this work, we propose a novel learning method on TrueNorth platform that constrains the random variance of each computation copy and reduces the number of needed copies. Compared to the existing learning method, our method can achieve up to 68.8% reduction of the required neuro-synaptic cores or 6.5X speedup, with even slightly improved inference accuracy.