Moein Khajehnejad

Guowei Zhang, Yun Zhao, Moein Khajehnejad et al.

Mapping human brain activity to natural images offers a new window into vision and cognition, yet current diffusion-based decoders face a core difficulty: most condition directly on fMRI features without analyzing how visual information is organized across the cortex. This overlooks the brain's hierarchical processing and blurs the roles of early, middle, and late visual areas. We propose Hi-DREAM, a brain-inspired conditional diffusion framework that makes the cortical organization explicit. A region-of-interest (ROI) adapter groups fMRI into early/mid/late streams and converts them into a multi-scale cortical pyramid aligned with the U-Net depth (shallow scales preserve layout and edges; deeper scales emphasize objects and semantics). A lightweight, depth-matched ControlNet injects these scale-specific hints during denoising. The result is an efficient and interpretable decoder in which each signal plays a brain-like role, allowing the model not only to reconstruct images but also to illuminate functional contributions of different visual areas. Experiments on the Natural Scenes Dataset (NSD) show that Hi-DREAM attains state-of-the-art performance on high-level semantic metrics while maintaining competitive low-level fidelity. These findings suggest that structuring conditioning by cortical hierarchy is a powerful alternative to purely data-driven embeddings and provides a useful lens for studying the visual cortex.

Sin-Yee Yap, Fuad Noman, Junn Yong Loo et al.

Psychedelics, such as psilocybin, reorganise large-scale brain connectivity, yet how these changes are reflected across electrophysiological (electroencephalogram, EEG) and haemodynamic (functional magnetic resonance imaging, fMRI) networks remains unclear. We present Brain-MGF, a multimodal graph fusion network for joint EEG-fMRI connectivity analysis. For each modality, we construct graphs with partial-correlation edges and Pearson-profile node features, and learn subject-level embeddings via graph convolution. An adaptive softmax gate then fuses modalities with sample-specific weights to capture context-dependent contributions. Using the world's largest single-site psilocybin dataset, PsiConnect, Brain-MGF distinguishes psilocybin from no-psilocybin conditions in meditation and rest. Fusion improves over unimodal and non-adaptive variants, achieving 74.0% accuracy and 76.5% F1 score on meditation, and 76.0% accuracy with 85.8% ROC-AUC on rest. UMAP visualisations reveal clearer class separation for fused embeddings. These results indicate that adaptive graph fusion effectively integrates complementary EEG-fMRI information, providing an interpretable framework for characterising psilocybin-induced alterations in large-scale neural organisation.

Aswin Paul, Moein Khajehnejad, Forough Habibollahi et al.

With recent and rapid advancements in artificial intelligence (AI), understanding the foundation of purposeful behaviour in autonomous agents is crucial for developing safe and efficient systems. While artificial neural networks have dominated the path to AI, recent studies are exploring the potential of biologically based systems, such as networks of living biological neuronal networks. Along with promises of high power and data efficiency, these systems may also inform more explainable and biologically plausible models. In this work, we propose a framework rooted in active inference, a general theory of behaviour, to model decision-making in embodied agents. Using experiment-informed generative models, we simulate decision-making processes in a simulated game-play environment, mirroring experimental setups that use biological neurons. Our results demonstrate learning in these agents, providing insights into the role of memory-based learning and predictive planning in intelligent decision-making. This work contributes to the growing field of explainable AI by offering a biologically grounded and scalable approach to understanding purposeful behaviour in agents.

Moein Khajehnejad, Forough Habibollahi, Adeel Razi

Existing foundation models for neuroimaging are often prohibitively large and data-intensive. We introduce BrainSymphony, a lightweight, parameter-efficient foundation model that achieves state-of-the-art performance while being pre-trained on significantly smaller public datasets. BrainSymphony's strong multimodal architecture processes functional MRI data through parallel spatial and temporal transformer streams, which are then efficiently distilled into a unified representation by a Perceiver module. Concurrently, it models structural connectivity from diffusion MRI using a novel signed graph transformer to encode the brain's anatomical structure. These powerful, modality-specific representations are then integrated via an adaptive fusion gate. Despite its compact design, our model consistently outperforms larger models on a diverse range of downstream benchmarks, including classification, prediction, and unsupervised network identification tasks. Furthermore, our model revealed novel insights into brain dynamics using attention maps on a unique external psilocybin neuroimaging dataset (pre- and post-administration). BrainSymphony establishes that architecturally-aware, multimodal models can surpass their larger counterparts, paving the way for more accessible and powerful research in computational neuroscience.

James A. Walker, Moein Khajehnejad, Adeel Razi

We propose a Bayesian framework for training binary and spiking neural networks that achieves state-of-the-art performance without normalisation layers. Unlike commonly used surrogate gradient methods -- often heuristic and sensitive to hyperparameter choices -- our approach is grounded in a probabilistic model of noisy binary networks, enabling fully end-to-end gradient-based optimisation. We introduce importance-weighted straight-through (IW-ST) estimators, a unified class generalising straight-through and relaxation-based estimators. We characterise the bias-variance trade-off in this family and derive a bias-minimising objective implemented via an auxiliary loss. Building on this, we introduce Spiking Bayesian Neural Networks (SBNNs), a variational inference framework that uses posterior noise to train Binary and Spiking Neural Networks with IW-ST. This Bayesian approach minimises gradient bias, regularises parameters, and introduces dropout-like noise. By linking low-bias conditions, vanishing gradients, and the KL term, we enable training of deep residual networks without normalisation. Experiments on CIFAR-10, DVS Gesture, and SHD show our method matches or exceeds existing approaches without normalisation or hand-tuned gradients.

Ahmad Khajehnejad, Moein Khajehnejad, Mahmoudreza Babaei et al.

The potential for machine learning systems to amplify social inequities and unfairness is receiving increasing popular and academic attention. Much recent work has focused on developing algorithmic tools to assess and mitigate such unfairness. However, there is little work on enhancing fairness in graph algorithms. Here, we develop a simple, effective and general method, CrossWalk, that enhances fairness of various graph algorithms, including influence maximization, link prediction and node classification, applied to node embeddings. CrossWalk is applicable to any random walk based node representation learning algorithm, such as DeepWalk and Node2Vec. The key idea is to bias random walks to cross group boundaries, by upweighting edges which (1) are closer to the groups' peripheries or (2) connect different groups in the network. CrossWalk pulls nodes that are near groups' peripheries towards their neighbors from other groups in the embedding space, while preserving the necessary structural properties of the graph. Extensive experiments show the effectiveness of our algorithm to enhance fairness in various graph algorithms, including influence maximization, link prediction and node classification in synthetic and real networks, with only a very small decrease in performance.

Moein Khajehnejad, Ahmad Asgharian Rezaei, Mahmoudreza Babaei et al.

Influence maximization is a widely studied topic in network science, where the aim is to reach the maximum possible number of nodes, while only targeting a small initial set of individuals. It has critical applications in many fields, including viral marketing, information propagation, news dissemination, and vaccinations. However, the objective does not usually take into account whether the final set of influenced nodes is fair with respect to sensitive attributes, such as race or gender. Here we address fair influence maximization, aiming to reach minorities more equitably. We introduce Adversarial Graph Embeddings: we co-train an auto-encoder for graph embedding and a discriminator to discern sensitive attributes. This leads to embeddings which are similarly distributed across sensitive attributes. We then find a good initial set by clustering the embeddings. We believe we are the first to use embeddings for the task of fair influence maximization. While there are typically trade-offs between fairness and influence maximization objectives, our experiments on synthetic and real-world datasets show that our approach dramatically reduces disparity while remaining competitive with state-of-the-art influence maximization methods.

Stratis Tsirtsis, Behzad Tabibian, Moein Khajehnejad et al.

We are witnessing an increasing use of data-driven predictive models to inform decisions. As decisions have implications for individuals and society, there is increasing pressure on decision makers to be transparent about their decision policies. At the same time, individuals may use knowledge, gained by transparency, to invest effort strategically in order to maximize their chances of receiving a beneficial decision. Our goal is to find decision policies that are optimal in terms of utility in such a strategic setting. To this end, we first characterize how strategic investment of effort by individuals leads to a change in the feature distribution. Using this characterization, we first show that, in general, we cannot expect to find optimal decision policies in polynomial time and there are cases in which deterministic policies are suboptimal. Then, we demonstrate that, if the cost individuals pay to change their features satisfies a natural monotonicity assumption, we can narrow down the search for the optimal policy to a particular family of decision policies with a set of desirable properties, which allow for a highly effective polynomial time heuristic search algorithm using dynamic programming. Finally, under no assumptions on the cost individuals pay to change their features, we develop an iterative search algorithm that is guaranteed to find locally optimal decision policies also in polynomial time. Experiments on synthetic and real credit card data illustrate our theoretical findings and show that the decision policies found by our algorithms achieve higher utility than those that do not account for strategic behavior.