Isabelle Bloch

CV
h-index13
39papers
511citations
Novelty46%
AI Score44

39 Papers

CVAug 18, 2023Code
Decoupled conditional contrastive learning with variable metadata for prostate lesion detection

Camille Ruppli, Pietro Gori, Roberto Ardon et al.

Early diagnosis of prostate cancer is crucial for efficient treatment. Multi-parametric Magnetic Resonance Images (mp-MRI) are widely used for lesion detection. The Prostate Imaging Reporting and Data System (PI-RADS) has standardized interpretation of prostate MRI by defining a score for lesion malignancy. PI-RADS data is readily available from radiology reports but is subject to high inter-reports variability. We propose a new contrastive loss function that leverages weak metadata with multiple annotators per sample and takes advantage of inter-reports variability by defining metadata confidence. By combining metadata of varying confidence with unannotated data into a single conditional contrastive loss function, we report a 3% AUC increase on lesion detection on the public PI-CAI challenge dataset. Code is available at: https://github.com/camilleruppli/decoupled_ccl

CVJul 10, 2023Code
Weakly-supervised positional contrastive learning: application to cirrhosis classification

Emma Sarfati, Alexandre Bône, Marc-Michel Rohé et al.

Large medical imaging datasets can be cheaply and quickly annotated with low-confidence, weak labels (e.g., radiological scores). Access to high-confidence labels, such as histology-based diagnoses, is rare and costly. Pretraining strategies, like contrastive learning (CL) methods, can leverage unlabeled or weakly-annotated datasets. These methods typically require large batch sizes, which poses a difficulty in the case of large 3D images at full resolution, due to limited GPU memory. Nevertheless, volumetric positional information about the spatial context of each 2D slice can be very important for some medical applications. In this work, we propose an efficient weakly-supervised positional (WSP) contrastive learning strategy where we integrate both the spatial context of each 2D slice and a weak label via a generic kernel-based loss function. We illustrate our method on cirrhosis prediction using a large volume of weakly-labeled images, namely radiological low-confidence annotations, and small strongly-labeled (i.e., high-confidence) datasets. The proposed model improves the classification AUC by 5% with respect to a baseline model on our internal dataset, and by 26% on the public LIHC dataset from the Cancer Genome Atlas. The code is available at: https://github.com/Guerbet-AI/wsp-contrastive.

IVOct 4, 2022
Anatomically constrained CT image translation for heterogeneous blood vessel segmentation

Giammarco La Barbera, Haithem Boussaid, Francesco Maso et al.

Anatomical structures such as blood vessels in contrast-enhanced CT (ceCT) images can be challenging to segment due to the variability in contrast medium diffusion. The combined use of ceCT and contrast-free (CT) CT images can improve the segmentation performances, but at the cost of a double radiation exposure. To limit the radiation dose, generative models could be used to synthesize one modality, instead of acquiring it. The CycleGAN approach has recently attracted particular attention because it alleviates the need for paired data that are difficult to obtain. Despite the great performances demonstrated in the literature, limitations still remain when dealing with 3D volumes generated slice by slice from unpaired datasets with different fields of view. We present an extension of CycleGAN to generate high fidelity images, with good structural consistency, in this context. We leverage anatomical constraints and automatic region of interest selection by adapting the Self-Supervised Body Regressor. These constraints enforce anatomical consistency and allow feeding anatomically-paired input images to the algorithm. Results show qualitative and quantitative improvements, compared to stateof-the-art methods, on the translation task between ceCT and CT images (and vice versa).

IVAug 22, 2023
Non-Redundant Combination of Hand-Crafted and Deep Learning Radiomics: Application to the Early Detection of Pancreatic Cancer

Rebeca Vétil, Clément Abi-Nader, Alexandre Bône et al.

We address the problem of learning Deep Learning Radiomics (DLR) that are not redundant with Hand-Crafted Radiomics (HCR). To do so, we extract DLR features using a VAE while enforcing their independence with HCR features by minimizing their mutual information. The resulting DLR features can be combined with hand-crafted ones and leveraged by a classifier to predict early markers of cancer. We illustrate our method on four early markers of pancreatic cancer and validate it on a large independent test set. Our results highlight the value of combining non-redundant DLR and HCR features, as evidenced by an improvement in the Area Under the Curve compared to baseline methods that do not address redundancy or solely rely on HCR features.

CVOct 21, 2022
Learning shape distributions from large databases of healthy organs: applications to zero-shot and few-shot abnormal pancreas detection

Rebeca Vétil, Clément Abi Nader, Alexandre Bône et al.

We propose a scalable and data-driven approach to learn shape distributions from large databases of healthy organs. To do so, volumetric segmentation masks are embedded into a common probabilistic shape space that is learned with a variational auto-encoding network. The resulting latent shape representations are leveraged to derive zeroshot and few-shot methods for abnormal shape detection. The proposed distribution learning approach is illustrated on a large database of 1200 healthy pancreas shapes. Downstream qualitative and quantitative experiments are conducted on a separate test set of 224 pancreas from patients with mixed conditions. The abnormal pancreas detection AUC reached up to 65.41% in the zero-shot configuration, and 78.97% in the few-shot configuration with as few as 15 abnormal examples, outperforming a baseline approach based on the sole volume.

CVFeb 16, 2023
Learning to diagnose cirrhosis from radiological and histological labels with joint self and weakly-supervised pretraining strategies

Emma Sarfati, Alexandre Bone, Marc-Michel Rohe et al.

Identifying cirrhosis is key to correctly assess the health of the liver. However, the gold standard diagnosis of the cirrhosis needs a medical intervention to obtain the histological confirmation, e.g. the METAVIR score, as the radiological presentation can be equivocal. In this work, we propose to leverage transfer learning from large datasets annotated by radiologists, which we consider as a weak annotation, to predict the histological score available on a small annex dataset. To this end, we propose to compare different pretraining methods, namely weakly-supervised and self-supervised ones, to improve the prediction of the cirrhosis. Finally, we introduce a loss function combining both supervised and self-supervised frameworks for pretraining. This method outperforms the baseline classification of the METAVIR score, reaching an AUC of 0.84 and a balanced accuracy of 0.75, compared to 0.77 and 0.72 for a baseline classifier.

CVJan 18, 2023
Model-based inexact graph matching on top of CNNs for semantic scene understanding

Jérémy Chopin, Jean-Baptiste Fasquel, Harold Mouchère et al.

Deep learning based pipelines for semantic segmentation often ignore structural information available on annotated images used for training. We propose a novel post-processing module enforcing structural knowledge about the objects of interest to improve segmentation results provided by deep learning. This module corresponds to a "many-to-one-or-none" inexact graph matching approach, and is formulated as a quadratic assignment problem. Our approach is compared to a CNN-based segmentation (for various CNN backbones) on two public datasets, one for face segmentation from 2D RGB images (FASSEG), and the other for brain segmentation from 3D MRIs (IBSR). Evaluations are performed using two types of structural information (distances and directional relations, , this choice being a hyper-parameter of our generic framework). On FASSEG data, results show that our module improves accuracy of the CNN by about 6.3% (the Hausdorff distance decreases from 22.11 to 20.71). On IBSR data, the improvement is of 51% (the Hausdorff distance decreases from 11.01 to 5.4). In addition, our approach is shown to be resilient to small training datasets that often limit the performance of deep learning methods: the improvement increases as the size of the training dataset decreases.

CVMay 12, 2022
Real-time Virtual-Try-On from a Single Example Image through Deep Inverse Graphics and Learned Differentiable Renderers

Robin Kips, Ruowei Jiang, Sileye Ba et al.

Augmented reality applications have rapidly spread across online platforms, allowing consumers to virtually try-on a variety of products, such as makeup, hair dying, or shoes. However, parametrizing a renderer to synthesize realistic images of a given product remains a challenging task that requires expert knowledge. While recent work has introduced neural rendering methods for virtual try-on from example images, current approaches are based on large generative models that cannot be used in real-time on mobile devices. This calls for a hybrid method that combines the advantages of computer graphics and neural rendering approaches. In this paper we propose a novel framework based on deep learning to build a real-time inverse graphics encoder that learns to map a single example image into the parameter space of a given augmented reality rendering engine. Our method leverages self-supervised learning and does not require labeled training data which makes it extendable to many virtual try-on applications. Furthermore, most augmented reality renderers are not differentiable in practice due to algorithmic choices or implementation constraints to reach real-time on portable devices. To relax the need for a graphics-based differentiable renderer in inverse graphics problems, we introduce a trainable imitator module. Our imitator is a generative network that learns to accurately reproduce the behavior of a given non-differentiable renderer. We propose a novel rendering sensitivity loss to train the imitator, which ensures that the network learns an accurate and continuous representation for each rendering parameter. Our framework enables novel applications where consumers can virtually try-on a novel unknown product from an inspirational reference image on social media. It can also be used by graphics artists to automatically create realistic rendering from a reference product image.

LGJul 27, 2022
Optimizing transformations for contrastive learning in a differentiable framework

Camille Ruppli, Pietro Gori, Roberto Ardon et al.

Current contrastive learning methods use random transformations sampled from a large list of transformations, with fixed hyperparameters, to learn invariance from an unannotated database. Following previous works that introduce a small amount of supervision, we propose a framework to find optimal transformations for contrastive learning using a differentiable transformation network. Our method increases performances at low annotated data regime both in supervision accuracy and in convergence speed. In contrast to previous work, no generative model is needed for transformation optimization. Transformed images keep relevant information to solve the supervised task, here classification. Experiments were performed on 34000 2D slices of brain Magnetic Resonance Images and 11200 chest X-ray images. On both datasets, with 10% of labeled data, our model achieves better performances than a fully supervised model with 100% labels.

CVJul 6, 2022
Is the U-Net Directional-Relationship Aware?

Mateus Riva, Pietro Gori, Florian Yger et al.

CNNs are often assumed to be capable of using contextual information about distinct objects (such as their directional relations) inside their receptive field. However, the nature and limits of this capacity has never been explored in full. We explore a specific type of relationship~-- directional~-- using a standard U-Net trained to optimize a cross-entropy loss function for segmentation. We train this network on a pretext segmentation task requiring directional relation reasoning for success and state that, with enough data and a sufficiently large receptive field, it succeeds to learn the proposed task. We further explore what the network has learned by analysing scenarios where the directional relationships are perturbed, and show that the network has learned to reason using these relationships.

AIMar 8, 2023
Morpho-logic from a Topos Perspective: Application to symbolic AI

Marc Aiguier, Isabelle Bloch, Salim Nibouche et al.

Modal logics have proved useful for many reasoning tasks in symbolic artificial intelligence (AI), such as belief revision, spatial reasoning, among others. On the other hand, mathematical morphology (MM) is a theory for non-linear analysis of structures, that was widely developed and applied in image analysis. Its mathematical bases rely on algebra, complete lattices, topology. Strong links have been established between MM and mathematical logics, mostly modal logics. In this paper, we propose to further develop and generalize this link between mathematical morphology and modal logic from a topos perspective, i.e. categorial structures generalizing space, and connecting logics, sets and topology. Furthermore, we rely on the internal language and logic of topos. We define structuring elements, dilations and erosions as morphisms. Then we introduce the notion of structuring neighborhoods, and show that the dilations and erosions based on them lead to a constructive modal logic, for which a sound and complete proof system is proposed. We then show that the modal logic thus defined (called morpho-logic here), is well adapted to define concrete and efficient operators for revision, merging, and abduction of new knowledge, or even spatial reasoning.

AISep 29, 2024
An action language-based formalisation of an abstract argumentation framework

Yann Munro, Camilo Sarmiento, Isabelle Bloch et al.

An abstract argumentation framework is a commonly used formalism to provide a static representation of a dialogue. However, the order of enunciation of the arguments in an argumentative dialogue is very important and can affect the outcome of this dialogue. In this paper, we propose a new framework for modelling abstract argumentation graphs, a model that incorporates the order of enunciation of arguments. By taking this order into account, we have the means to deduce a unique outcome for each dialogue, called an extension. We also establish several properties, such as termination and correctness, and discuss two notions of completeness. In particular, we propose a modification of the previous transformation based on a "last enunciated last updated" strategy, which verifies the second form of completeness.

AIMar 6
Aggregative Semantics for Quantitative Bipolar Argumentation Frameworks

Yann Munro, Isabelle Bloch, Marie-Jeanne Lesot

Formal argumentation is being used increasingly in artificial intelligence as an effective and understandable way to model potentially conflicting pieces of information, called arguments, and identify so-called acceptable arguments depending on a chosen semantics. This paper deals with the specific context of Quantitative Bipolar Argumentation Frameworks (QBAF), where arguments have intrinsic weights and can attack or support each other. In this context, we introduce a novel family of gradual semantics, called aggregative semantics. In order to deal with situations in which attackers and supporters do not play a symmetric role, and in contrast to modular semantics, we propose to aggregate attackers and supporters separately. This leads to a three-stage computation, which consists in computing a global weight for attackers and another for supporters, before aggregating these two values with the intrinsic weight of the argument. We discuss the properties that the three aggregation functions should satisfy depending on the context, as well as their relationships with the classical principles for gradual semantics. This discussion is supported by various simple examples, as well as a final example on which five hundred aggregative semantics are tested and compared, illustrating the range of possible behaviours with aggregative semantics. Decomposing the computation into three distinct and interpretable steps leads to a more parametrisable computation: it keeps the bipolarity one step further than what is done in the literature, and it leads to more understandable gradual semantics.

CVAug 29, 2024
Exploiting temporal information to detect conversational groups in videos and predict the next speaker

Lucrezia Tosato, Victor Fortier, Isabelle Bloch et al.

Studies in human human interaction have introduced the concept of F formation to describe the spatial arrangement of participants during social interactions. This paper has two objectives. It aims at detecting F formations in video sequences and predicting the next speaker in a group conversation. The proposed approach exploits time information and human multimodal signals in video sequences. In particular, we rely on measuring the engagement level of people as a feature of group belonging. Our approach makes use of a recursive neural network, the Long Short Term Memory (LSTM), to predict who will take the speaker's turn in a conversation group. Experiments on the MatchNMingle dataset led to 85% true positives in group detection and 98% accuracy in predicting the next speaker.

AIApr 30, 2025
First Order Logic with Fuzzy Semantics for Describing and Recognizing Nerves in Medical Images

Isabelle Bloch, Enzo Bonnot, Pietro Gori et al.

This article deals with the description and recognition of fiber bundles, in particular nerves, in medical images, based on the anatomical description of the fiber trajectories. To this end, we propose a logical formalization of this anatomical knowledge. The intrinsically imprecise description of nerves, as found in anatomical textbooks, leads us to propose fuzzy semantics combined with first-order logic. We define a language representing spatial entities, relations between these entities and quantifiers. A formula in this language is then a formalization of the natural language description. The semantics are given by fuzzy representations in a concrete domain and satisfaction degrees of relations. Based on this formalization, a spatial reasoning algorithm is proposed for segmentation and recognition of nerves from anatomical and diffusion magnetic resonance images, which is illustrated on pelvic nerves in pediatric imaging, enabling surgeons to plan surgery.

CVSep 18, 2025
Visionerves: Automatic and Reproducible Hybrid AI for Peripheral Nervous System Recognition Applied to Endometriosis Cases

Giammarco La Barbera, Enzo Bonnot, Thomas Isla et al.

Endometriosis often leads to chronic pelvic pain and possible nerve involvement, yet imaging the peripheral nerves remains a challenge. We introduce Visionerves, a novel hybrid AI framework for peripheral nervous system recognition from multi-gradient DWI and morphological MRI data. Unlike conventional tractography, Visionerves encodes anatomical knowledge through fuzzy spatial relationships, removing the need for selection of manual ROIs. The pipeline comprises two phases: (A) automatic segmentation of anatomical structures using a deep learning model, and (B) tractography and nerve recognition by symbolic spatial reasoning. Applied to the lumbosacral plexus in 10 women with (confirmed or suspected) endometriosis, Visionerves demonstrated substantial improvements over standard tractography, with Dice score improvements of up to 25% and spatial errors reduced to less than 5 mm. This automatic and reproducible approach enables detailed nerve analysis and paves the way for non-invasive diagnosis of endometriosis-related neuropathy, as well as other conditions with nerve involvement.

CVMay 11, 2023
Meta-Learners for Few-Shot Weakly-Supervised Medical Image Segmentation

Hugo Oliveira, Pedro H. T. Gama, Isabelle Bloch et al.

Most uses of Meta-Learning in visual recognition are very often applied to image classification, with a relative lack of works in other tasks {such} as segmentation and detection. We propose a generic Meta-Learning framework for few-shot weakly-supervised segmentation in medical imaging domains. We conduct a comparative analysis of meta-learners from distinct paradigms adapted to few-shot image segmentation in different sparsely annotated radiological tasks. The imaging modalities include 2D chest, mammographic and dental X-rays, as well as 2D slices of volumetric tomography and resonance images. Our experiments consider a total of 9 meta-learners, 4 backbones and multiple target organ segmentation tasks. We explore small-data scenarios in radiology with varying weak annotation styles and densities. Our analysis shows that metric-based meta-learning approaches achieve better segmentation results in tasks with smaller domain shifts in comparison to the meta-training datasets, while some gradient- and fusion-based meta-learners are more generalizable to larger domain shifts.

GRFeb 8, 2022
Hair Color Digitization through Imaging and Deep Inverse Graphics

Robin Kips, Panagiotis-Alexandros Bokaris, Matthieu Perrot et al.

Hair appearance is a complex phenomenon due to hair geometry and how the light bounces on different hair fibers. For this reason, reproducing a specific hair color in a rendering environment is a challenging task that requires manual work and expert knowledge in computer graphics to tune the result visually. While current hair capture methods focus on hair shape estimation many applications could benefit from an automated method for capturing the appearance of a physical hair sample, from augmented/virtual reality to hair dying development. Building on recent advances in inverse graphics and material capture using deep neural networks, we introduce a novel method for hair color digitization. Our proposed pipeline allows capturing the color appearance of a physical hair sample and renders synthetic images of hair with a similar appearance, simulating different hair styles and/or lighting environments. Since rendering realistic hair images requires path-tracing rendering, the conventional inverse graphics approach based on differentiable rendering is untractable. Our method is based on the combination of a controlled imaging device, a path-tracing renderer, and an inverse graphics model based on self-supervised machine learning, which does not require to use differentiable rendering to be trained. We illustrate the performance of our hair digitization method on both real and synthetic images and show that our approach can accurately capture and render hair color.

IVFeb 1, 2022
A deep residual learning implementation of Metamorphosis

Matthis Maillard, Anton François, Joan Glaunès et al.

In medical imaging, most of the image registration methods implicitly assume a one-to-one correspondence between the source and target images (i.e., diffeomorphism). However, this is not necessarily the case when dealing with pathological medical images (e.g., presence of a tumor, lesion, etc.). To cope with this issue, the Metamorphosis model has been proposed. It modifies both the shape and the appearance of an image to deal with the geometrical and topological differences. However, the high computational time and load have hampered its applications so far. Here, we propose a deep residual learning implementation of Metamorphosis that drastically reduces the computational time at inference. Furthermore, we also show that the proposed framework can easily integrate prior knowledge of the localization of topological changes (e.g., segmentation masks) that can act as spatial regularization to correctly disentangle appearance and shape changes. We test our method on the BraTS 2021 dataset, showing that it outperforms current state-of-the-art methods in the alignment of images with brain tumors.

CVJul 6, 2021
Automatic size and pose homogenization with spatial transformer network to improve and accelerate pediatric segmentation

Giammarco La Barbera, Pietro Gori, Haithem Boussaid et al.

Due to a high heterogeneity in pose and size and to a limited number of available data, segmentation of pediatric images is challenging for deep learning methods. In this work, we propose a new CNN architecture that is pose and scale invariant thanks to the use of Spatial Transformer Network (STN). Our architecture is composed of three sequential modules that are estimated together during training: (i) a regression module to estimate a similarity matrix to normalize the input image to a reference one; (ii) a differentiable module to find the region of interest to segment; (iii) a segmentation module, based on the popular UNet architecture, to delineate the object. Unlike the original UNet, which strives to learn a complex mapping, including pose and scale variations, from a finite training dataset, our segmentation module learns a simpler mapping focusing on images with normalized pose and size. Furthermore, the use of an automatic bounding box detection through STN allows saving time and especially memory, while keeping similar performance. We test the proposed method in kidney and renal tumor segmentation on abdominal pediatric CT scanners. Results indicate that the estimated STN homogenization of size and pose accelerates the segmentation (25h), compared to standard data-augmentation (33h), while obtaining a similar quality for the kidney (88.01\% of Dice score) and improving the renal tumor delineation (from 85.52\% to 87.12\%).

MLJul 5, 2021
Template-Based Graph Clustering

Mateus Riva, Florian Yger, Pietro Gori et al.

We propose a novel graph clustering method guided by additional information on the underlying structure of the clusters (or communities). The problem is formulated as the matching of a graph to a template with smaller dimension, hence matching $n$ vertices of the observed graph (to be clustered) to the $k$ vertices of a template graph, using its edges as support information, and relaxed on the set of orthonormal matrices in order to find a $k$ dimensional embedding. With relevant priors that encode the density of the clusters and their relationships, our method outperforms classical methods, especially for challenging cases.

CVJun 17, 2021
Knowledge distillation from multi-modal to mono-modal segmentation networks

Minhao Hu, Matthis Maillard, Ya Zhang et al.

The joint use of multiple imaging modalities for medical image segmentation has been widely studied in recent years. The fusion of information from different modalities has demonstrated to improve the segmentation accuracy, with respect to mono-modal segmentations, in several applications. However, acquiring multiple modalities is usually not possible in a clinical setting due to a limited number of physicians and scanners, and to limit costs and scan time. Most of the time, only one modality is acquired. In this paper, we propose KD-Net, a framework to transfer knowledge from a trained multi-modal network (teacher) to a mono-modal one (student). The proposed method is an adaptation of the generalized distillation framework where the student network is trained on a subset (1 modality) of the teacher's inputs (n modalities). We illustrate the effectiveness of the proposed framework in brain tumor segmentation with the BraTS 2018 dataset. Using different architectures, we show that the student network effectively learns from the teacher and always outperforms the baseline mono-modal network in terms of segmentation accuracy.

CVMay 12, 2021
Deep Graphics Encoder for Real-Time Video Makeup Synthesis from Example

Robin Kips, Ruowei Jiang, Sileye Ba et al.

While makeup virtual-try-on is now widespread, parametrizing a computer graphics rendering engine for synthesizing images of a given cosmetics product remains a challenging task. In this paper, we introduce an inverse computer graphics method for automatic makeup synthesis from a reference image, by learning a model that maps an example portrait image with makeup to the space of rendering parameters. This method can be used by artists to automatically create realistic virtual cosmetics image samples, or by consumers, to virtually try-on a makeup extracted from their favorite reference image.

CVFeb 22, 2021
Approximation of dilation-based spatial relations to add structural constraints in neural networks

Mateus Riva, Pietro Gori, Florian Yger et al.

Spatial relations between objects in an image have proved useful for structural object recognition. Structural constraints can act as regularization in neural network training, improving generalization capability with small datasets. Several relations can be modeled as a morphological dilation of a reference object with a structuring element representing the semantics of the relation, from which the degree of satisfaction of the relation between another object and the reference object can be derived. However, dilation is not differentiable, requiring an approximation to be used in the context of gradient-descent training of a network. We propose to approximate dilations using convolutions based on a kernel equal to the structuring element. We show that the proposed approximation, even if slightly less accurate than previous approximations, is definitely faster to compute and therefore more suitable for computationally intensive neural network applications.

IVJan 18, 2021
Comparing Deep Learning strategies for paired but unregistered multimodal segmentation of the liver in T1 and T2-weighted MRI

Vincent Couteaux, Mathilde Trintignac, Olivier Nempont et al.

We address the problem of multimodal liver segmentation in paired but unregistered T1 and T2-weighted MR images. We compare several strategies described in the literature, with or without multi-task training, with or without pre-registration. We also compare different loss functions (cross-entropy, Dice loss, and three adversarial losses). All methods achieved comparable performances with the exception of a multi-task setting that performs both segmentations at once, which performed poorly.

CVDec 4, 2020
Encoding the latent posterior of Bayesian Neural Networks for uncertainty quantification

Gianni Franchi, Andrei Bursuc, Emanuel Aldea et al.

Bayesian neural networks (BNNs) have been long considered an ideal, yet unscalable solution for improving the robustness and the predictive uncertainty of deep neural networks. While they could capture more accurately the posterior distribution of the network parameters, most BNN approaches are either limited to small networks or rely on constraining assumptions such as parameter independence. These drawbacks have enabled prominence of simple, but computationally heavy approaches such as Deep Ensembles, whose training and testing costs increase linearly with the number of networks. In this work we aim for efficient deep BNNs amenable to complex computer vision architectures, e.g. ResNet50 DeepLabV3+, and tasks, e.g. semantic segmentation, with fewer assumptions on the parameters. We achieve this by leveraging variational autoencoders (VAEs) to learn the interaction and the latent distribution of the parameters at each network layer. Our approach, Latent-Posterior BNN (LP-BNN), is compatible with the recent BatchEnsemble method, leading to highly efficient ({in terms of computation and} memory during both training and testing) ensembles. LP-BNN s attain competitive results across multiple metrics in several challenging benchmarks for image classification, semantic segmentation and out-of-distribution detection.

CVSep 29, 2020
Improving Interpretability for Computer-aided Diagnosis tools on Whole Slide Imaging with Multiple Instance Learning and Gradient-based Explanations

Antoine Pirovano, Hippolyte Heuberger, Sylvain Berlemont et al.

Deep learning methods are widely used for medical applications to assist medical doctors in their daily routines. While performances reach expert's level, interpretability (highlight how and what a trained model learned and why it makes a specific decision) is the next important challenge that deep learning methods need to answer to be fully integrated in the medical field. In this paper, we address the question of interpretability in the context of whole slide images (WSI) classification. We formalize the design of WSI classification architectures and propose a piece-wise interpretability approach, relying on gradient-based methods, feature visualization and multiple instance learning context. We aim at explaining how the decision is made based on tile level scoring, how these tile scores are decided and which features are used and relevant for the task. After training two WSI classification architectures on Camelyon-16 WSI dataset, highlighting discriminative features learned, and validating our approach with pathologists, we propose a novel manner of computing interpretability slide-level heat-maps, based on the extracted features, that improves tile-level classification performances by more than 29% for AUC.

CVAug 24, 2020
CA-GAN: Weakly Supervised Color Aware GAN for Controllable Makeup Transfer

Robin Kips, Pietro Gori, Matthieu Perrot et al.

While existing makeup style transfer models perform an image synthesis whose results cannot be explicitly controlled, the ability to modify makeup color continuously is a desirable property for virtual try-on applications. We propose a new formulation for the makeup style transfer task, with the objective to learn a color controllable makeup style synthesis. We introduce CA-GAN, a generative model that learns to modify the color of specific objects (e.g. lips or eyes) in the image to an arbitrary target color while preserving background. Since color labels are rare and costly to acquire, our method leverages weakly supervised learning for conditional GANs. This enables to learn a controllable synthesis of complex objects, and only requires a weak proxy of the image attribute that we desire to modify. Finally, we present for the first time a quantitative analysis of makeup style transfer and color control performance.

CVJun 1, 2020
One Versus all for deep Neural Network Incertitude (OVNNI) quantification

Gianni Franchi, Andrei Bursuc, Emanuel Aldea et al.

Deep neural networks (DNNs) are powerful learning models yet their results are not always reliable. This is due to the fact that modern DNNs are usually uncalibrated and we cannot characterize their epistemic uncertainty. In this work, we propose a new technique to quantify the epistemic uncertainty of data easily. This method consists in mixing the predictions of an ensemble of DNNs trained to classify One class vs All the other classes (OVA) with predictions from a standard DNN trained to perform All vs All (AVA) classification. On the one hand, the adjustment provided by the AVA DNN to the score of the base classifiers allows for a more fine-grained inter-class separation. On the other hand, the two types of classifiers enforce mutually their detection of out-of-distribution (OOD) samples, circumventing entirely the requirement of using such samples during training. Our method achieves state of the art performance in quantifying OOD data across multiple datasets and architectures while requiring little hyper-parameter tuning.

IVMar 20, 2020
Investigating Image Applications Based on Spatial-Frequency Transform and Deep Learning Techniques

Qinkai Zheng, Han Qiu, Gerard Memmi et al.

This is the report for the PRIM project in Telecom Paris. This report is about applications based on spatial-frequency transform and deep learning techniques. In this report, there are two main works. The first work is about the enhanced JPEG compression method based on deep learning. we propose a novel method to highly enhance the JPEG compression by transmitting fewer image data at the sender's end. At the receiver's end, we propose a DC recovery algorithm together with the deep residual learning framework to recover images with high quality. The second work is about adversarial examples defenses based on signal processing. We propose the wavelet extension method to extend image data features, which makes it more difficult to generate adversarial examples. We further adopt wavelet denoising to reduce the influence of the adversarial perturbations. With intensive experiments, we demonstrate that both works are effective in their application scenarios.

LGDec 24, 2019
TRADI: Tracking deep neural network weight distributions for uncertainty estimation

Gianni Franchi, Andrei Bursuc, Emanuel Aldea et al.

During training, the weights of a Deep Neural Network (DNN) are optimized from a random initialization towards a nearly optimum value minimizing a loss function. Only this final state of the weights is typically kept for testing, while the wealth of information on the geometry of the weight space, accumulated over the descent towards the minimum is discarded. In this work we propose to make use of this knowledge and leverage it for computing the distributions of the weights of the DNN. This can be further used for estimating the epistemic uncertainty of the DNN by sampling an ensemble of networks from these distributions. To this end we introduce a method for tracking the trajectory of the weights during optimization, that does not require any changes in the architecture nor on the training procedure. We evaluate our method on standard classification and regression benchmarks, and on out-of-distribution detection for classification and semantic segmentation. We achieve competitive results, while preserving computational efficiency in comparison to other popular approaches.

CVMar 20, 2019
Part-based approximations for morphological operators using asymmetric auto-encoders

Bastien Ponchon, Santiago Velasco-Forero, Samy Blusseau et al.

This paper addresses the issue of building a part-based representation of a dataset of images. More precisely, we look for a non-negative, sparse decomposition of the images on a reduced set of atoms, in order to unveil a morphological and interpretable structure of the data. Additionally, we want this decomposition to be computed online for any new sample that is not part of the initial dataset. Therefore, our solution relies on a sparse, non-negative auto-encoder where the encoder is deep (for accuracy) and the decoder shallow (for interpretability). This method compares favorably to the state-of-the-art online methods on two datasets (MNIST and Fashion MNIST), according to classical metrics and to a new one we introduce, based on the invariance of the representation to morphological dilation.

STMar 19, 2019
Max-plus Operators Applied to Filter Selection and Model Pruning in Neural Networks

Yunxiang Zhang, Samy Blusseau, Santiago Velasco-Forero et al.

Following recent advances in morphological neural networks, we propose to study in more depth how Max-plus operators can be exploited to define morphological units and how they behave when incorporated in layers of conventional neural networks. Besides showing that they can be easily implemented with modern machine learning frameworks , we confirm and extend the observation that a Max-plus layer can be used to select important filters and reduce redundancy in its previous layer, without incurring performance loss. Experimental results demonstrate that the filter selection strategy enabled by a Max-plus is highly efficient and robust, through which we successfully performed model pruning on different neural network architectures. We also point out that there is a close connection between Maxout networks and our pruned Max-plus networks by comparing their respective characteristics. The code for reproducing our experiments is available online.

AIMar 5, 2018
Explanatory relations in arbitrary logics based on satisfaction systems, cutting and retraction

Marc Aiguier, Jamal Atif, Isabelle Bloch et al.

The aim of this paper is to introduce a new framework for defining abductive reasoning operators based on a notion of retraction in arbitrary logics defined as satisfaction systems. We show how this framework leads to the design of explanatory relations satisfying properties of abductive reasoning, and discuss its application to several logics. This extends previous work on propositional logics where retraction was defined as a morphological erosion. Here weaker properties are required for retraction, leading to a larger set of suitable operators for abduction for different logics.

AIFeb 14, 2018
Morphologic for knowledge dynamics: revision, fusion, abduction

Isabelle Bloch, Jérôme Lang, Ramón Pino Pérez et al.

Several tasks in artificial intelligence require to be able to find models about knowledge dynamics. They include belief revision, fusion and belief merging, and abduction. In this paper we exploit the algebraic framework of mathematical morphology in the context of propositional logic, and define operations such as dilation or erosion of a set of formulas. We derive concrete operators, based on a semantic approach, that have an intuitive interpretation and that are formally well behaved, to perform revision, fusion and abduction. Computation and tractability are addressed, and simple examples illustrate the typical results that can be obtained.

LGJan 16, 2017
Classification of MRI data using Deep Learning and Gaussian Process-based Model Selection

Hadrien Bertrand, Matthieu Perrot, Roberto Ardon et al.

The classification of MRI images according to the anatomical field of view is a necessary task to solve when faced with the increasing quantity of medical images. In parallel, advances in deep learning makes it a suitable tool for computer vision problems. Using a common architecture (such as AlexNet) provides quite good results, but not sufficient for clinical use. Improving the model is not an easy task, due to the large number of hyper-parameters governing both the architecture and the training of the network, and to the limited understanding of their relevance. Since an exhaustive search is not tractable, we propose to optimize the network first by random search, and then by an adaptive search based on Gaussian Processes and Probability of Improvement. Applying this method on a large and varied MRI dataset, we show a substantial improvement between the baseline network and the final one (up to 20\% for the most difficult classes).

CVDec 19, 2016
Exploring Structure for Long-Term Tracking of Multiple Objects in Sports Videos

Henrique Morimitsu, Isabelle Bloch, Roberto M. Cesar-Jr

In this paper, we propose a novel approach for exploiting structural relations to track multiple objects that may undergo long-term occlusion and abrupt motion. We use a model-free approach that relies only on annotations given in the first frame of the video to track all the objects online, i.e. without knowledge from future frames. We initialize a probabilistic Attributed Relational Graph (ARG) from the first frame, which is incrementally updated along the video. Instead of using the structural information only to evaluate the scene, the proposed approach considers it to generate new tracking hypotheses. In this way, our method is capable of generating relevant object candidates that are used to improve or recover the track of lost objects. The proposed method is evaluated on several videos of table tennis, volleyball, and on the ACASVA dataset. The results show that our approach is very robust, flexible and able to outperform other state-of-the-art methods in sports videos that present structural patterns.

AIFeb 26, 2015
Relaxation-based revision operators in description logics

Marc Aiguier, Jamal Atif, Isabelle Bloch et al.

As ontologies and description logics (DLs) reach out to a broader audience, several reasoning services are developed in this context. Belief revision is one of them, of prime importance when knowledge is prone to change and inconsistency. In this paper we address both the generalization of the well-known AGM postulates, and the definition of concrete and well-founded revision operators in different DL families. We introduce a model-theoretic version of the AGM postulates with a general definition of inconsistency, hence enlarging their scope to a wide family of non-classical logics, in particular negation-free DL families. We propose a general framework for defining revision operators based on the notion of relaxation, introduced recently for defining dissimilarity measures between DL concepts. A revision operator in this framework amounts to relax the set of models of the old belief until it reaches the sets of models of the new piece of knowledge. We demonstrate that such a relaxation-based revision operator defines a faithful assignment and satisfies the generalized AGM postulates. Another important contribution concerns the definition of several concrete relaxation operators suited to the syntax of some DLs (ALC and its fragments EL and ELU).

AIFeb 8, 2015
Belief Revision, Minimal Change and Relaxation: A General Framework based on Satisfaction Systems, and Applications to Description Logics

Marc Aiguier, Jamal Atif, Isabelle Bloch et al.

Belief revision of knowledge bases represented by a set of sentences in a given logic has been extensively studied but for specific logics, mainly propositional, and also recently Horn and description logics. Here, we propose to generalize this operation from a model-theoretic point of view, by defining revision in an abstract model theory known under the name of satisfaction systems. In this framework, we generalize to any satisfaction systems the characterization of the well known AGM postulates given by Katsuno and Mendelzon for propositional logic in terms of minimal change among interpretations. Moreover, we study how to define revision, satisfying the AGM postulates, from relaxation notions that have been first introduced in description logics to define dissimilarity measures between concepts, and the consequence of which is to relax the set of models of the old belief until it becomes consistent with the new pieces of knowledge. We show how the proposed general framework can be instantiated in different logics such as propositional, first-order, description and Horn logics. In particular for description logics, we introduce several concrete relaxation operators tailored for the description logic $\ALC{}$ and its fragments $\EL{}$ and $\ELext{}$, discuss their properties and provide some illustrative examples.