Jawad Chowdhury

Jawad Chowdhury, Rezaur Rashid, Gabriel Terejanu

Causal modeling provides us with powerful counterfactual reasoning and interventional mechanism to generate predictions and reason under various what-if scenarios. However, causal discovery using observation data remains a nontrivial task due to unobserved confounding factors, finite sampling, and changes in the data distribution. These can lead to spurious cause-effect relationships. To mitigate these challenges in practice, researchers augment causal learning with known causal relations. The goal of the paper is to study the impact of expert knowledge on causal relations in the form of additional constraints used in the formulation of the nonparametric NOTEARS. We provide a comprehensive set of comparative analyses of biasing the model using different types of knowledge. We found that (i) knowledge that corrects the mistakes of the NOTEARS model can lead to statistically significant improvements, (ii) constraints on active edges have a larger positive impact on causal discovery than inactive edges, and surprisingly, (iii) the induced knowledge does not correct on average more incorrect active and/or inactive edges than expected. We also demonstrate the behavior of the model and the effectiveness of domain knowledge on a real-world dataset.

Jeremy Shen, Jawad Chowdhury, Sourav Banerjee et al.

A new approach is introduced to classify faults in rotating machinery based on the total energy signature estimated from sensor measurements. The overall goal is to go beyond using black-box models and incorporate additional physical constraints that govern the behavior of mechanical systems. Observational data is used to train Hamiltonian neural networks that describe the conserved energy of the system for normal and various abnormal regimes. The estimated total energy function, in the form of the weights of the Hamiltonian neural network, serves as the new feature vector to discriminate between the faults using off-the-shelf classification models. The experimental results are obtained using the MaFaulDa database, where the proposed model yields a promising area under the curve (AUC) of $0.78$ for the binary classification (normal vs abnormal) and $0.84$ for the multi-class problem (normal, and $5$ different abnormal regimes).

Rezaur Rashid, Jawad Chowdhury, Gabriel Terejanu

Causal structure learning from observational data remains a non-trivial task due to various factors such as finite sampling, unobserved confounding factors, and measurement errors. Constraint-based and score-based methods tend to suffer from high computational complexity due to the combinatorial nature of estimating the directed acyclic graph (DAG). Motivated by the `Cause-Effect Pair' NIPS 2013 Workshop on Causality Challenge, in this paper, we take a different approach and generate a probability distribution over all possible graphs informed by the cause-effect pair features proposed in response to the workshop challenge. The goal of the paper is to propose new methods based on this probabilistic information and compare their performance with traditional and state-of-the-art approaches. Our experiments, on both synthetic and real datasets, show that our proposed methods not only have statistically similar or better performances than some traditional approaches but also are computationally faster.

Jawad Chowdhury, Rezaur Rashid, Gabriel Terejanu

Understanding affective polarization in online discourse is crucial for evaluating the societal impact of social media interactions. This study presents a novel framework that leverages large language models (LLMs) and domain-informed heuristics to systematically analyze and quantify affective polarization in discussions on divisive topics such as climate change and gun control. Unlike most prior approaches that relied on sentiment analysis or predefined classifiers, our method integrates LLMs to extract stance, affective tone, and agreement patterns from large-scale social media discussions. We then apply a rule-based scoring system capable of quantifying affective polarization even in small conversations consisting of single interactions, based on stance alignment, emotional content, and interaction dynamics. Our analysis reveals distinct polarization patterns that are event dependent: (i) anticipation-driven polarization, where extreme polarization escalates before well-publicized events, and (ii) reactive polarization, where intense affective polarization spikes immediately after sudden, high-impact events. By combining AI-driven content annotation with domain-informed scoring, our framework offers a scalable and interpretable approach to measuring affective polarization. The source code is publicly available at: https://github.com/hasanjawad001/llm-social-media-polarization.

Asraful Haque, Daniel T. Yimam, Jawad Chowdhury et al.

Autonomous laboratories typically rely on data-driven decision-making, occasionally with human-in-the-loop oversight to inject domain expertise. Fully leveraging AI agents, however, requires tightly coupled, collaborative workflows spanning hypothesis generation, experimental planning, execution, and interpretation. To address this, we develop and deploy a human-AI collaborative (HAIC) workflow that integrates large language models for hypothesis generation and analysis, with collaborative policy updates driving autonomous pulsed laser deposition (PLD) experiments for remote epitaxy of BaTiO$_3$/graphene. HAIC accelerated the hypothesis formation and experimental design and efficiently mapped the growth space to graphene-damage. In situ Raman spectroscopy reveals that chemistry drives degradation while the highest energy plume components seed defects, identifying a low-O$_2$ pressure low-temperature synthesis window that preserves graphene but is incompatible with optimal BaTiO$_3$ growth. Thus, we show a two-step Ar/O$_2$ deposition is required to exfoliate ferroelectric BaTiO$_3$ while maintaining a monolayer graphene interlayer. HAIC stages human insight with AI reasoning between autonomous batches to drive rapid scientific progress, providing an evolution to many existing human-in-the-loop autonomous workflows.

Jawad Chowdhury, Ganesh Narasimha, Jan-Chi Yang et al.

Autonomous experimental systems are increasingly used in materials research to accelerate scientific discovery, but their performance is often limited by low-quality, noisy data. This issue is especially problematic in data-intensive structure-property learning tasks such as Image-to-Spectrum (Im2Spec) and Spectrum-to-Image (Spec2Im) translations, where standard active learning strategies can mistakenly prioritize poor-quality measurements. We introduce a gated active learning framework that combines curiosity-driven sampling with a physics-informed quality control filter based on the Simple Harmonic Oscillator model fits, allowing the system to automatically exclude low-fidelity data during acquisition. Evaluations on a pre-acquired dataset of band-excitation piezoresponse spectroscopy (BEPS) data from PbTiO3 thin films with spatially localized noise show that the proposed method outperforms random sampling, standard active learning, and multitask learning strategies. The gated approach enhances both Im2Spec and Spec2Im by handling noise during training and acquisition, leading to more reliable forward and inverse predictions. In contrast, standard active learners often misinterpret noise as uncertainty and end up acquiring bad samples that hurt performance. Given its promising applicability, we further deployed the framework in real-time experiments on BiFeO3 thin films, demonstrating its effectiveness in real autonomous microscopy experiments. Overall, this work supports a shift toward hybrid autonomy in self-driving labs, where physics-informed quality assessment and active decision-making work hand-in-hand for more reliable discovery.

Jawad Chowdhury, Gabriel Terejanu

Improving generalization and achieving highly predictive, robust machine learning models necessitates learning the underlying causal structure of the variables of interest. A prominent and effective method for this is learning invariant predictors across multiple environments. In this work, we introduce a simple yet powerful approach, CGLearn, which relies on the agreement of gradients across various environments. This agreement serves as a powerful indication of reliable features, while disagreement suggests less reliability due to potential differences in underlying causal mechanisms. Our proposed method demonstrates superior performance compared to state-of-the-art methods in both linear and nonlinear settings across various regression and classification tasks. CGLearn shows robust applicability even in the absence of separate environments by exploiting invariance across different subsamples of observational data. Comprehensive experiments on both synthetic and real-world datasets highlight its effectiveness in diverse scenarios. Our findings underscore the importance of leveraging gradient agreement for learning causal invariance, providing a significant step forward in the field of robust machine learning. The source code of the linear and nonlinear implementation of CGLearn is open-source and available at: https://github.com/hasanjawad001/CGLearn.

Ralph Bulanadi, Jawad Chowdhury, Funakubo Hiroshi et al.

Autonomous experiments (AEs) are transforming how scientific research is conducted by integrating artificial intelligence with automated experimental platforms. Current AEs primarily focus on the optimization of a predefined target; while accelerating this goal, such an approach limits the discovery of unexpected or unknown physical phenomena. Here, we introduce a novel framework, INS2ANE (Integrated Novelty Score-Strategic Autonomous Non-Smooth Exploration), to enhance the discovery of novel phenomena in autonomous experimentation. Our method integrates two key components: (1) a novelty scoring system that evaluates the uniqueness of experimental results, and (2) a strategic sampling mechanism that promotes exploration of under-sampled regions even if they appear less promising by conventional criteria. We validate this approach on a pre-acquired dataset with a known ground truth comprising of image-spectral pairs. We further implement the process on autonomous scanning probe microscopy experiments. INS2ANE significantly increases the diversity of explored phenomena in comparison to conventional optimization routines, enhancing the likelihood of discovering previously unobserved phenomena. These results demonstrate the potential for AE to enhance the depth of scientific discovery; in combination with the efficiency provided by AEs, this approach promises to accelerate scientific research by simultaneously navigating complex experimental spaces to uncover new phenomena.

Aditya Vatsavai, Ganesh Narasimha, Yongtao Liu et al.

Rapidly determining structure-property correlations in materials is an important challenge in better understanding fundamental mechanisms and greatly assists in materials design. In microscopy, imaging data provides a direct measurement of the local structure, while spectroscopic measurements provide relevant functional property information. Deep kernel active learning approaches have been utilized to rapidly map local structure to functional properties in microscopy experiments, but are computationally expensive for multi-dimensional and correlated output spaces. Here, we present an alternative lightweight curiosity algorithm which actively samples regions with unexplored structure-property relations, utilizing a deep-learning based surrogate model for error prediction. We show that the algorithm outperforms random sampling for predicting properties from structures, and provides a convenient tool for efficient mapping of structure-property relationships in materials science.

Gabriel Terejanu, Jawad Chowdhury, Rezaur Rashid et al.

The vast majority of research on explainability focuses on post-explainability rather than explainable modeling. Namely, an explanation model is derived to explain a complex black box model built with the sole purpose of achieving the highest performance possible. In part, this trend might be driven by the misconception that there is a trade-off between explainability and accuracy. Furthermore, the consequential work on Shapely values, grounded in game theory, has also contributed to a new wave of post-explainability research on better approximations for various machine learning models, including deep learning models. We propose a new architecture that inherently produces explainable predictions in the form of additive feature attributions. Our approach learns a graph representation for each record in the dataset. Attribute centric features are then derived from the graph and fed into a contribution deep set model to produce the final predictions. We show that our explainable model attains the same level of performance as black box models. Finally, we provide an augmented model training approach that leverages the missingness property and yields high levels of consistency (as required for the Shapely values) without loss of accuracy.