Hui Sun

Shanshan Wang, Cheng Li, Rongpin Wang et al.

Automatic medical image segmentation plays a critical role in scientific research and medical care. Existing high-performance deep learning methods typically rely on large training datasets with high-quality manual annotations, which are difficult to obtain in many clinical applications. Here, we introduce Annotation-effIcient Deep lEarning (AIDE), an open-source framework to handle imperfect training datasets. Methodological analyses and empirical evaluations are conducted, and we demonstrate that AIDE surpasses conventional fully-supervised models by presenting better performance on open datasets possessing scarce or noisy annotations. We further test AIDE in a real-life case study for breast tumor segmentation. Three datasets containing 11,852 breast images from three medical centers are employed, and AIDE, utilizing 10% training annotations, consistently produces segmentation maps comparable to those generated by fully-supervised counterparts or provided by independent radiologists. The 10-fold enhanced efficiency in utilizing expert labels has the potential to promote a wide range of biomedical applications.

Hui Sun, Tianqing Zhu, Zhiqiu Zhang et al.

Deep generative models have gained much attention given their ability to generate data for applications as varied as healthcare to financial technology to surveillance, and many more - the most popular models being generative adversarial networks and variational auto-encoders. Yet, as with all machine learning models, ever is the concern over security breaches and privacy leaks and deep generative models are no exception. These models have advanced so rapidly in recent years that work on their security is still in its infancy. In an attempt to audit the current and future threats against these models, and to provide a roadmap for defense preparations in the short term, we prepared this comprehensive and specialized survey on the security and privacy preservation of GANs and VAEs. Our focus is on the inner connection between attacks and model architectures and, more specifically, on five components of deep generative models: the training data, the latent code, the generators/decoders of GANs/ VAEs, the discriminators/encoders of GANs/ VAEs, and the generated data. For each model, component and attack, we review the current research progress and identify the key challenges. The paper concludes with a discussion of possible future attacks and research directions in the field.

Hui Sun, Cheng Li, Boqiang Liu et al.

Mammography is one of the most commonly applied tools for early breast cancer screening. Automatic segmentation of breast masses in mammograms is essential but challenging due to the low signal-to-noise ratio and the wide variety of mass shapes and sizes. Existing methods deal with these challenges mainly by extracting mass-centered image patches manually or automatically. However, manual patch extraction is time-consuming and automatic patch extraction brings errors that could not be compensated in the following segmentation step. In this study, we propose a novel attention-guided dense-upsampling network (AUNet) for accurate breast mass segmentation in whole mammograms directly. In AUNet, we employ an asymmetrical encoder-decoder structure and propose an effective upsampling block, attention-guided dense-upsampling block (AU block). Especially, the AU block is designed to have three merits. Firstly, it compensates the information loss of bilinear upsampling by dense upsampling. Secondly, it designs a more effective method to fuse high- and low-level features. Thirdly, it includes a channel-attention function to highlight rich-information channels. We evaluated the proposed method on two publicly available datasets, CBIS-DDSM and INbreast. Compared to three state-of-the-art fully convolutional networks, AUNet achieved the best performances with an average Dice similarity coefficient of 81.8% for CBIS-DDSM and 79.1% for INbreast.