Jie Ren

IT
h-index19
4papers
13citations
Novelty43%
AI Score24

4 Papers

3.3GNSep 3, 2024
Toward Capturing Genetic Epistasis From Multivariate Genome-Wide Association Studies Using Mixed-Precision Kernel Ridge Regression

Hatem Ltaief, Rabab Alomairy, Qinglei Cao et al.

We exploit the widening margin in tensor-core performance between [FP64/FP32/FP16/INT8,FP64/FP32/FP16/FP8/INT8] on NVIDIA [Ampere,Hopper] GPUs to boost the performance of output accuracy-preserving mixed-precision computation of Genome-Wide Association Studies (GWAS) of 305K patients from the UK BioBank, the largest-ever GWAS cohort studied for genetic epistasis using a multivariate approach. Tile-centric adaptive-precision linear algebraic techniques motivated by reducing data motion gain enhanced significance with low-precision GPU arithmetic. At the core of Kernel Ridge Regression (KRR) techniques for GWAS lie compute-bound cubic-complexity matrix operations that inhibit scaling to aspirational dimensions of the population, genotypes, and phenotypes. We accelerate KRR matrix generation by redesigning the computation for Euclidean distances to engage INT8 tensor cores while exploiting symmetry.We accelerate solution of the regularized KRR systems by deploying a new four-precision Cholesky-based solver, which, at 1.805 mixed-precision ExaOp/s on a nearly full Alps system, outperforms the state-of-the-art CPU-only REGENIE GWAS software by five orders of magnitude.

1.2ITApr 28, 2017
A Framework for Rate Efficient Control of Distributed Discrete Systems

Jie Ren, Solmaz Torabi, John MacLaren Walsh

A key issue in the control of distributed discrete systems modeled as Markov decisions processes, is that often the state of the system is not directly observable at any single location in the system. The participants in the control scheme must share information with one another regarding the state of the system in order to collectively make informed control decisions, but this information sharing can be costly. Harnessing recent results from information theory regarding distributed function computation, in this paper we derive, for several information sharing model structures, the minimum amount of control information that must be exchanged to enable local participants to derive the same control decisions as an imaginary omniscient controller having full knowledge of the global state. Incorporating consideration for this amount of information that must be exchanged into the reward enables one to trade the competing objectives of minimizing this control information exchange and maximizing the performance of the controller. An alternating optimization framework is then provided to help find the efficient controllers and messaging schemes. A series of running examples from wireless resource allocation illustrate the ideas and design tradeoffs.

1.2NIMay 2, 2020
Smart, Adaptive Energy Optimization for Mobile Web Interactions

Jie Ren, Lu Yuan, Petteri Nurmi et al.

Web technology underpins many interactive mobile applications. However, energy-efficient mobile web interactions is an outstanding challenge. Given the increasing diversity and complexity of mobile hardware, any practical optimization scheme must work for a wide range of users, mobile platforms and web workloads. This paper presents CAMEL , a novel energy optimization system for mobile web interactions. CAMEL leverages machine learning techniques to develop a smart, adaptive scheme to judiciously trade performance for reduced power consumption. Unlike prior work, C AMEL directly models how a given web content affects the user expectation and uses this to guide energy optimization. It goes further by employing transfer learning and conformal predictions to tune a previously learned model in the end-user environment and improve it over time. We apply CAMEL to Chromium and evaluate it on four distinct mobile systems involving 1,000 testing webpages and 30 users. Compared to four state-of-the-art web-event optimizers, CAMEL delivers 22% more energy savings, but with 49% fewer violations on the quality of user experience, and exhibits orders of magnitudes less overhead when targeting a new computing environment.

2.2LGOct 21, 2018
To Compress, or Not to Compress: Characterizing Deep Learning Model Compression for Embedded Inference

Qing Qin, Jie Ren, Jialong Yu et al.

The recent advances in deep neural networks (DNNs) make them attractive for embedded systems. However, it can take a long time for DNNs to make an inference on resource-constrained computing devices. Model compression techniques can address the computation issue of deep inference on embedded devices. This technique is highly attractive, as it does not rely on specialized hardware, or computation-offloading that is often infeasible due to privacy concerns or high latency. However, it remains unclear how model compression techniques perform across a wide range of DNNs. To design efficient embedded deep learning solutions, we need to understand their behaviors. This work develops a quantitative approach to characterize model compression techniques on a representative embedded deep learning architecture, the NVIDIA Jetson Tx2. We perform extensive experiments by considering 11 influential neural network architectures from the image classification and the natural language processing domains. We experimentally show that how two mainstream compression techniques, data quantization and pruning, perform on these network architectures and the implications of compression techniques to the model storage size, inference time, energy consumption and performance metrics. We demonstrate that there are opportunities to achieve fast deep inference on embedded systems, but one must carefully choose the compression settings. Our results provide insights on when and how to apply model compression techniques and guidelines for designing efficient embedded deep learning systems.