Zheng Ma

Guohang Yan, Liu Zhuochun, Chengjie Wang et al. · stanford

Accurate sensor calibration is a prerequisite for multi-sensor perception and localization systems for autonomous vehicles. The intrinsic parameter calibration of the sensor is to obtain the mapping relationship inside the sensor, and the extrinsic parameter calibration is to transform two or more sensors into a unified spatial coordinate system. Most sensors need to be calibrated after installation to ensure the accuracy of sensor measurements. To this end, we present OpenCalib, a calibration toolbox that contains a rich set of various sensor calibration methods. OpenCalib covers manual calibration tools, automatic calibration tools, factory calibration tools, and online calibration tools for different application scenarios. At the same time, to evaluate the calibration accuracy and subsequently improve the accuracy of the calibration algorithm, we released a corresponding benchmark dataset. This paper introduces various features and calibration methods of this toolbox. To our knowledge, this is the first open-sourced calibration codebase containing the full set of autonomous-driving-related calibration approaches in this area. We wish that the toolbox could be helpful to autonomous driving researchers. We have open-sourced our code on GitHub to benefit the community. Code is available at https://github.com/PJLab-ADG/SensorsCalibration.

Jingkang Yang, Wenxuan Peng, Xiangtai Li et al. · stanford

Towards building comprehensive real-world visual perception systems, we propose and study a new problem called panoptic scene graph generation (PVSG). PVSG relates to the existing video scene graph generation (VidSGG) problem, which focuses on temporal interactions between humans and objects grounded with bounding boxes in videos. However, the limitation of bounding boxes in detecting non-rigid objects and backgrounds often causes VidSGG to miss key details crucial for comprehensive video understanding. In contrast, PVSG requires nodes in scene graphs to be grounded by more precise, pixel-level segmentation masks, which facilitate holistic scene understanding. To advance research in this new area, we contribute the PVSG dataset, which consists of 400 videos (289 third-person + 111 egocentric videos) with a total of 150K frames labeled with panoptic segmentation masks as well as fine, temporal scene graphs. We also provide a variety of baseline methods and share useful design practices for future work.

Yanxiang Gong, Linjie Deng, Shuai Tao et al.

Recently, deep learning-based methods have reached an excellent performance on License Plate (LP) detection and recognition tasks. However, it is still challenging to build a robust model for Chinese LPs since there are not enough large and representative datasets. In this work, we propose a new dataset named Chinese Road Plate Dataset (CRPD) that contains multi-objective Chinese LP images as a supplement to the existing public benchmarks. The images are mainly captured with electronic monitoring systems with detailed annotations. To our knowledge, CRPD is the largest public multi-objective Chinese LP dataset with annotations of vertices. With CRPD, a unified detection and recognition network with high efficiency is presented as the baseline. The network is end-to-end trainable with totally real-time inference efficiency (30 fps with 640p). The experiments on several public benchmarks demonstrate that our method has reached competitive performance. The code and dataset will be publicly available at https://github.com/yxgong0/CRPD.

Kanzhi Cheng, Zheng Ma, Shi Zong et al.

Generating visually grounded image captions with specific linguistic styles using unpaired stylistic corpora is a challenging task, especially since we expect stylized captions with a wide variety of stylistic patterns. In this paper, we propose a novel framework to generate Accurate and Diverse Stylized Captions (ADS-Cap). Our ADS-Cap first uses a contrastive learning module to align the image and text features, which unifies paired factual and unpaired stylistic corpora during the training process. A conditional variational auto-encoder is then used to automatically memorize diverse stylistic patterns in latent space and enhance diversity through sampling. We also design a simple but effective recheck module to boost style accuracy by filtering style-specific captions. Experimental results on two widely used stylized image captioning datasets show that regarding consistency with the image, style accuracy and diversity, ADS-Cap achieves outstanding performances compared to various baselines. We finally conduct extensive analyses to understand the effectiveness of our method. Our code is available at https://github.com/njucckevin/ADS-Cap.

Kanzhi Cheng, Zehao Li, Zheng Ma et al.

Mobile agents powered by vision-language models have demonstrated impressive capabilities in automating mobile tasks, with recent leading models achieving a marked performance leap, e.g., nearly 70% success on AndroidWorld. However, these systems keep their training data closed and remain opaque about their task and trajectory synthesis recipes. We present OpenMobile, an open-source framework that synthesizes high-quality task instructions and agent trajectories, with two key components: (1) The first is a scalable task synthesis pipeline that constructs a global environment memory from exploration, then leverages it to generate diverse and grounded instructions. and (2) a policy-switching strategy for trajectory rollout. By alternating between learner and expert models, it captures essential error-recovery data often missing in standard imitation learning. Agents trained on our data achieve competitive results across three dynamic mobile agent benchmarks: notably, our fine-tuned Qwen2.5-VL and Qwen3-VL reach 51.7% and 64.7% on AndroidWorld, far surpassing existing open-data approaches. Furthermore, we conduct transparent analyses on the overlap between our synthetic instructions and benchmark test sets, and verify that performance gains stem from broad functionality coverage rather than benchmark overfitting. We release data and code at https://njucckevin.github.io/openmobile/ to bridge the data gap and facilitate broader mobile agent research.

Kanzhi Cheng, Wenpo Song, Zheng Ma et al.

Current captioning approaches tend to generate correct but "generic" descriptions that lack real-world knowledge, e.g., named entities and contextual information. Considering that Vision-Language Pre-Training (VLP) models master massive such knowledge from large-scale web-harvested data, it is promising to utilize the generalizability of VLP models to incorporate knowledge into image descriptions. However, using VLP models faces challenges: zero-shot inference suffers from knowledge hallucination that leads to low-quality descriptions, but the generic bias in downstream task fine-tuning hinders the VLP model from expressing knowledge. To address these concerns, we propose a simple yet effective method called Knowledge-guided Replay (K-Replay), which enables the retention of pre-training knowledge during fine-tuning. Our approach consists of two parts: (1) a knowledge prediction task on automatically collected replay exemplars to continuously awaken the VLP model's memory about knowledge, thus preventing the model from collapsing into the generic pattern; (2) a knowledge distillation constraint to improve the faithfulness of generated descriptions hence alleviating the knowledge hallucination. To evaluate knowledge-enhanced descriptions, we construct a novel captioning benchmark KnowCap, containing knowledge of landmarks, famous brands, special foods and movie characters. Experimental results show that our approach effectively incorporates knowledge into descriptions, outperforming strong VLP baseline by 20.9 points (78.7->99.6) in CIDEr score and 20.5 percentage points (34.0%->54.5%) in knowledge recognition accuracy. Our code and data is available at https://github.com/njucckevin/KnowCap.

Jian-Guo Liu, Zheng Ma, Zhennan Zhou

In this paper, we investigate numerical approximations of the scalar conservation law with the Caputo derivative, which introduces the memory effect. We construct the first order and the second order explicit upwind schemes for such equations, which are shown to be conditionally $\ell^1$ contracting and TVD. However, the Caputo derivative leads to the modified CFL-type stability condition, $ (Δt)^α = O(Δx)$, where $α\in (0,1]$ is the fractional exponent in the derivative. When $α$ small, such strong constraint makes the numerical implementation extremely impractical. We have then proposed the implicit upwind scheme to overcome this issue, which is proved to be unconditionally $\ell^1$ contracting and TVD. Various numerical tests are presented to validate the properties of the methods and provide more numerical evidence in interpreting the memory effect in conservation laws.

Keke Wu, Xiong-bin Yan, Shi Jin et al.

In this paper, we introduce two types of novel Asymptotic-Preserving Convolutional Deep Operator Networks (APCONs) designed to address the multiscale time-dependent linear transport problem. We observe that the vanilla physics-informed DeepONets with modified MLP may exhibit instability in maintaining the desired limiting macroscopic behavior. Therefore, this necessitates the utilization of an asymptotic-preserving loss function. Drawing inspiration from the heat kernel in the diffusion equation, we propose a new architecture called Convolutional Deep Operator Networks, which employ multiple local convolution operations instead of a global heat kernel, along with pooling and activation operations in each filter layer. Our APCON methods possess a parameter count that is independent of the grid size and are capable of capturing the diffusive behavior of the linear transport problem. Finally, we validate the effectiveness of our methods through several numerical examples.

Shi Jin, Zheng Ma

We develop a general polynomial chaos (gPC) based stochastic Galerkin (SG) for hyperbolic equations with random and singular coefficients. Due to the singu- lar nature of the solution, the standard gPC-SG methods may suffer from a poor or even non convergence. Taking advantage of the fact that the discrete solution, by the central type finite difference or finite volume approximations in space and time for example, is smoother, we first discretize the equation by a smooth finite difference or finite volume scheme, and then use the gPC-SG approximation to the discrete system. The jump condition at the interface is treated using the immersed upwind methods introduced in [8, 12]. This yields a method that converges with the spectral accuracy for finite mesh size and time step. We use a linear hyperbolic equation with discontinuous and random coefficient, and the Liouville equation with discontinuous and random potential, to illustrate our idea, with both one and second order spatial discretizations. Spectral convergence is established for the first equation, and numerical examples for both equations show the desired accu- racy of the method.

Zhe Chen, Weiyun Wang, Hao Tian et al.

In this report, we introduce InternVL 1.5, an open-source multimodal large language model (MLLM) to bridge the capability gap between open-source and proprietary commercial models in multimodal understanding. We introduce three simple improvements: (1) Strong Vision Encoder: we explored a continuous learning strategy for the large-scale vision foundation model -- InternViT-6B, boosting its visual understanding capabilities, and making it can be transferred and reused in different LLMs. (2) Dynamic High-Resolution: we divide images into tiles ranging from 1 to 40 of 448$\times$448 pixels according to the aspect ratio and resolution of the input images, which supports up to 4K resolution input. (3) High-Quality Bilingual Dataset: we carefully collected a high-quality bilingual dataset that covers common scenes, document images, and annotated them with English and Chinese question-answer pairs, significantly enhancing performance in OCR- and Chinese-related tasks. We evaluate InternVL 1.5 through a series of benchmarks and comparative studies. Compared to both open-source and proprietary models, InternVL 1.5 shows competitive performance, achieving state-of-the-art results in 8 of 18 benchmarks. Code has been released at https://github.com/OpenGVLab/InternVL.

Zheng Ma, Mianzhi Pan, Wenhan Wu et al.

Vision-language models (VLMs) have shown impressive performance in substantial downstream multi-modal tasks. However, only comparing the fine-tuned performance on downstream tasks leads to the poor interpretability of VLMs, which is adverse to their future improvement. Several prior works have identified this issue and used various probing methods under a zero-shot setting to detect VLMs' limitations, but they all examine VLMs using general datasets instead of specialized ones. In practical applications, VLMs are usually applied to specific scenarios, such as e-commerce and news fields, so the generalization of VLMs in specific domains should be given more attention. In this paper, we comprehensively investigate the capabilities of popular VLMs in a specific field, the food domain. To this end, we build a food caption dataset, Food-500 Cap, which contains 24,700 food images with 494 categories. Each image is accompanied by a detailed caption, including fine-grained attributes of food, such as the ingredient, shape, and color. We also provide a culinary culture taxonomy that classifies each food category based on its geographic origin in order to better analyze the performance differences of VLM in different regions. Experiments on our proposed datasets demonstrate that popular VLMs underperform in the food domain compared with their performance in the general domain. Furthermore, our research reveals severe bias in VLMs' ability to handle food items from different geographic regions. We adopt diverse probing methods and evaluate nine VLMs belonging to different architectures to verify the aforementioned observations. We hope that our study will bring researchers' attention to VLM's limitations when applying them to the domain of food or culinary cultures, and spur further investigations to address this issue.

Fei Zhao, Taotian Pang, Zhen Wu et al.

In-context learning (ICL) is a new paradigm for natural language processing (NLP), where a large language model (LLM) observes a small number of demonstrations and a test instance as its input, and directly makes predictions without updating model parameters. Previous studies have revealed that ICL is sensitive to the selection and the ordering of demonstrations. However, there are few studies regarding the impact of the demonstration number on the ICL performance within a limited input length of LLM, because it is commonly believed that the number of demonstrations is positively correlated with model performance. In this paper, we found this conclusion does not always hold true. Through pilot experiments, we discover that increasing the number of demonstrations does not necessarily lead to improved performance. Building upon this insight, we propose a Dynamic Demonstrations Controller (D$^2$Controller), which can improve the ICL performance by adjusting the number of demonstrations dynamically. The experimental results show that D$^2$Controller yields a 4.6% relative improvement on ten different sizes of LLMs across ten datasets. Moreover, we also extend our method to previous ICL models and achieve competitive results.

Zheng Ma, Shi Zong, Mianzhi Pan et al.

In recent years, vision and language pre-training (VLP) models have advanced the state-of-the-art results in a variety of cross-modal downstream tasks. Aligning cross-modal semantics is claimed to be one of the essential capabilities of VLP models. However, it still remains unclear about the inner working mechanism of alignment in VLP models. In this paper, we propose a new probing method that is based on image captioning to first empirically study the cross-modal semantics alignment of VLP models. Our probing method is built upon the fact that given an image-caption pair, the VLP models will give a score, indicating how well two modalities are aligned; maximizing such scores will generate sentences that VLP models believe are of good alignment. Analyzing these sentences thus will reveal in what way different modalities are aligned and how well these alignments are in VLP models. We apply our probing method to five popular VLP models, including UNITER, ROSITA, ViLBERT, CLIP, and LXMERT, and provide a comprehensive analysis of the generated captions guided by these models. Our results show that VLP models (1) focus more on just aligning objects with visual words, while neglecting global semantics; (2) prefer fixed sentence patterns, thus ignoring more important textual information including fluency and grammar; and (3) deem the captions with more visual words are better aligned with images. These findings indicate that VLP models still have weaknesses in cross-modal semantics alignment and we hope this work will draw researchers' attention to such problems when designing a new VLP model.

Zheng Ma, Changxin Wang, Bo Huang et al.

Most image captioning models following an autoregressive manner suffer from significant inference latency. Several models adopted a non-autoregressive manner to speed up the process. However, the vanilla non-autoregressive manner results in subpar performance, since it generates all words simultaneously, which fails to capture the relationships between words in a description. The semi-autoregressive manner employs a partially parallel method to preserve performance, but it sacrifices inference speed. In this paper, we introduce a fast and flexible framework for image captioning called BoFiCap based on bounding and filling techniques. The BoFiCap model leverages the inherent characteristics of image captioning tasks to pre-define bounding boxes for image regions and their relationships. Subsequently, the BoFiCap model fills corresponding words in each box using two-generation manners. Leveraging the box hints, our filling process allows each word to better perceive other words. Additionally, our model offers flexible image description generation: 1) by employing different generation manners based on speed or performance requirements, 2) producing varied sentences based on user-specified boxes. Experimental evaluations on the MS-COCO benchmark dataset demonstrate that our framework in a non-autoregressive manner achieves the state-of-the-art on task-specific metric CIDEr (125.6) while speeding up 9.22x than the baseline model with an autoregressive manner; in a semi-autoregressive manner, our method reaches 128.4 on CIDEr while a 3.69x speedup. Our code and data is available at https://github.com/ChangxinWang/BoFiCap.

Katrina Chen, Xiuqin Liang, Zheng Ma et al.

Data imputation is an effective way to handle missing data, which is common in practical applications. In this study, we propose and test a novel data imputation process that achieve two important goals: (1) preserve the row-wise similarities among observations and column-wise contextual relationships among features in the feature matrix, and (2) tailor the imputation process to specific downstream label prediction task. The proposed imputation process uses Transformer network and graph structure learning to iteratively refine the contextual relationships among features and similarities among observations. Moreover, it uses a meta-learning framework to select features that are influential to the downstream prediction task of interest. We conduct experiments on real-world large data sets, and show that the proposed imputation process consistently improves imputation and label prediction performance over a variety of benchmark methods.

Yanxiang Gong, Zhiwei Xie, Guozhen Duan et al.

Mode collapse is a significant unsolved issue of generative adversarial networks. In this work, we examine the causes of mode collapse from a novel perspective. Due to the nonuniform sampling in the training process, some sub-distributions may be missed when sampling data. As a result, even when the generated distribution differs from the real one, the GAN objective can still achieve the minimum. To address the issue, we propose a global distribution fitting (GDF) method with a penalty term to confine the generated data distribution. When the generated distribution differs from the real one, GDF will make the objective harder to reach the minimal value, while the original global minimum is not changed. To deal with the circumstance when the overall real data is unreachable, we also propose a local distribution fitting (LDF) method. Experiments on several benchmarks demonstrate the effectiveness and competitive performance of GDF and LDF.

Jinhao Jing, Zheng Ma, Jinwei Liang et al.

Large Multimodal Models (LMMs) often struggle with geometric reasoning due to visual hallucinations and a lack of mathematically precise Chain-of-Thought (CoT) data. To address this, we propose the GeoSym Engine, an automated and scalable neuro-symbolic framework. By leveraging a type-conditional grammar and an analytic SymGT Solver, it derives exact symbolic ground truths and seamlessly integrates with a robust rendering pipeline to produce high-precision geometric diagrams. Using this engine, we construct GeoSym127K, a difficulty-stratified dataset featuring 51K high-resolution images, 127K questions with symbolic ground truths, and 55K answer-verified CoT QA pairs. We also introduce GeoSym-Bench, an expert-curated suite of 511 complex samples for rigorous evaluation. Through extensive supervised fine-tuning (SFT), we demonstrate that GeoSym drives concentrated improvements specifically on diagram-dependent and multi-step geometry tasks. Our Qwen3-VL-8B model gains an absolute +22.21% on the MathVerse Vision-Only subset and reaches 61.52% (+6.19% improvement) on WeMath, mitigating long-horizon logic fragmentation and outperforming advanced closed-source models like Doubao-1.8. Furthermore, applying Reinforcement Learning with Verifiable Rewards (RLVR) via GRPO reveals that initializing from structural SFT checkpoints substantially elevates the performance ceiling over zero-shot RL. Driven by deterministic exact-match signals, this showcases the robust scaling potential of our verifiable reasoning synthesis. Datasets and code are available at https://huggingface.co/datasets/Tomie0506/GeoSym127K and https://github.com/Tomie56/GeoSym127K.

Xiong-Bin Yan, Zhi-Qin John Xu, Zheng Ma

The use of Physics-informed neural networks (PINNs) has shown promise in solving forward and inverse problems of fractional diffusion equations. However, due to the fact that automatic differentiation is not applicable for fractional derivatives, solving fractional diffusion equations using PINNs requires addressing additional challenges. To address this issue, this paper proposes an extension to PINNs called Laplace-based fractional physics-informed neural networks (Laplace-fPINNs), which can effectively solve the forward and inverse problems of fractional diffusion equations. This approach avoids introducing a mass of auxiliary points and simplifies the loss function. We validate the effectiveness of the Laplace-fPINNs approach using several examples. Our numerical results demonstrate that the Laplace-fPINNs method can effectively solve both the forward and inverse problems of high-dimensional fractional diffusion equations.

Xiong-bin Yan, Zhi-Qin John Xu, Zheng Ma

Fractional diffusion equations have been an effective tool for modeling anomalous diffusion in complicated systems. However, traditional numerical methods require expensive computation cost and storage resources because of the memory effect brought by the convolution integral of time fractional derivative. We propose a Bayesian Inversion with Neural Operator (BINO) to overcome the difficulty in traditional methods as follows. We employ a deep operator network to learn the solution operators for the fractional diffusion equations, allowing us to swiftly and precisely solve a forward problem for given inputs (including fractional order, diffusion coefficient, source terms, etc.). In addition, we integrate the deep operator network with a Bayesian inversion method for modelling a problem by subdiffusion process and solving inverse subdiffusion problems, which reduces the time costs (without suffering from overwhelm storage resources) significantly. A large number of numerical experiments demonstrate that the operator learning method proposed in this work can efficiently solve the forward problems and Bayesian inverse problems of the subdiffusion equation.

Kanzhi Cheng, Wenpo Song, Jiaxin Fan et al.

Image captioning has been a longstanding challenge in vision-language research. With the rise of LLMs, modern Vision-Language Models (VLMs) generate detailed and comprehensive image descriptions. However, benchmarking the quality of such captions remains unresolved. This paper addresses two key questions: (1) How well do current VLMs actually perform on image captioning, particularly compared to humans? We built CapArena, a platform with over 6000 pairwise caption battles and high-quality human preference votes. Our arena-style evaluation marks a milestone, showing that leading models like GPT-4o achieve or even surpass human performance, while most open-source models lag behind. (2) Can automated metrics reliably assess detailed caption quality? Using human annotations from CapArena, we evaluate traditional and recent captioning metrics, as well as VLM-as-a-Judge. Our analysis reveals that while some metrics (e.g., METEOR) show decent caption-level agreement with humans, their systematic biases lead to inconsistencies in model ranking. In contrast, VLM-as-a-Judge demonstrates robust discernment at both the caption and model levels. Building on these insights, we release CapArena-Auto, an accurate and efficient automated benchmark for detailed captioning, achieving 94.3% correlation with human rankings at just $4 per test. Data and resources will be open-sourced at https://caparena.github.io.

Zheng Ma, Jiazhen Chen, Lei Xin et al.

The integration of deep learning approaches in biomedical research has been transformative, enabling breakthroughs in various applications. Despite these strides, its application in protein inference is impeded by the scarcity of extensively labeled datasets, a challenge compounded by the high costs and complexities of accurate protein annotation. In this study, we introduce GraphPI, a novel framework that treats protein inference as a node classification problem. We treat proteins as interconnected nodes within a protein-peptide-PSM graph, utilizing a Graph Neural Network-based architecture to elucidate their interrelations. To address label scarcity, we train the model on a set of unlabeled public protein datasets with pseudo-labels derived from an existing protein inference algorithm, enhanced by self-training to iteratively refine labels based on confidence scores. Contrary to prevalent methodologies necessitating dataset-specific training, our research illustrates that GraphPI, due to the well normalized nature of Percolator features, exhibits universal applicability without dataset-specific fine-tuning, a feature that not only mitigates the risk of overfitting but also enhances computational efficiency. Our empirical experiments reveal notable performance on various test datasets and deliver significantly reduced computation times compared to common protein inference algorithms.

Xiong-Bin Yan, Keke Wu, Zhi-Qin John Xu et al.

Full-waveform inversion (FWI) is a powerful geophysical imaging technique that infers high-resolution subsurface physical parameters by solving a non-convex optimization problem. However, due to limitations in observation, e.g., limited shots or receivers, and random noise, conventional inversion methods are confronted with numerous challenges, such as the local-minimum problem. In recent years, a substantial body of work has demonstrated that the integration of deep neural networks and partial differential equations for solving full-waveform inversion problems has shown promising performance. In this work, drawing inspiration from the expressive capacity of neural networks, we provide an unsupervised learning approach aimed at accurately reconstructing subsurface physical velocity parameters. This method is founded on a re-parametrization technique for Bayesian inference, achieved through a deep neural network with random weights. Notably, our proposed approach does not hinge upon the requirement of the labeled training dataset, rendering it exceedingly versatile and adaptable to diverse subsurface models. Extensive experiments show that the proposed approach performs noticeably better than existing conventional inversion methods.

Ruize Ma, Yilei Jiang, Shilin Zhang et al.

Multimodal Automated Program Repair (MAPR) extends traditional program repair by requiring models to jointly reason over source code, textual issue descriptions, and visual artifacts such as GUI screenshots. While recent LLM-based repair systems have shown promising results, existing approaches face several limitations: rigid workflow pipelines restrict exploration during debugging, visual reasoning is often performed over full-page screenshots without localized grounding, and failed repair attempts are rarely transformed into reusable knowledge. To address these challenges, we propose FailureMem, a multimodal repair framework that integrates three key mechanisms: a hybrid workflow-agent architecture that balances structured localization with flexible reasoning, active perception tools that enable region-level visual grounding, and a Failure Memory Bank that converts past repair attempts into reusable guidance. Experiments on SWE-bench Multimodal demonstrate FailureMem improves the resolved rate over GUIRepair by 3.7%.

Zheng Ma, Changxin Wang, Yawen Ouyang et al.

Evaluating the compatibility between textual descriptions and corresponding images represents a core endeavor within multi-modal research. In recent years, a proliferation of reference-free methods, leveraging visual-language pre-trained models (VLMs), has emerged. Empirical evidence has substantiated that these innovative approaches exhibit a higher correlation with human judgment, marking a significant advancement in the field. However, does a higher correlation with human evaluations alone sufficiently denote the complete of a metric? In response to this question, in this paper, we study if there are any deficiencies in reference-free metrics. Specifically, inspired by the Cobra Effect, we utilize metric scores as rewards to direct the captioning model toward generating descriptions that closely align with the metric's criteria. If a certain metric has flaws, it will be exploited by the model and reflected in the generated sentences. Our findings reveal that descriptions guided by these metrics contain significant flaws, e.g. incoherent statements and excessive repetition. Subsequently, we propose a novel method termed Self-Improving to rectify the identified shortcomings within these metrics. We employ GPT-4V as an evaluative tool to assess generated sentences and the result reveals that our approach achieves state-of-the-art (SOTA) performance. In addition, we also introduce a challenging evaluation benchmark called Flaws Caption to evaluate reference-free image captioning metrics comprehensively. Our code is available at https://github.com/aaronma2020/robust_captioning_metric

Yuenan Hou, Zheng Ma, Chunxiao Liu et al.

Channel pruning is broadly recognized as an effective approach to obtain a small compact model through eliminating unimportant channels from a large cumbersome network. Contemporary methods typically perform iterative pruning procedure from the original over-parameterized model, which is both tedious and expensive especially when the pruning is aggressive. In this paper, we propose a simple yet effective channel pruning technique, termed network Pruning via rEsource rEalLocation (PEEL), to quickly produce a desired slim model with negligible cost. Specifically, PEEL first constructs a predefined backbone and then conducts resource reallocation on it to shift parameters from less informative layers to more important layers in one round, thus amplifying the positive effect of these informative layers. To demonstrate the effectiveness of PEEL , we perform extensive experiments on ImageNet with ResNet-18, ResNet-50, MobileNetV2, MobileNetV3-small and EfficientNet-B0. Experimental results show that structures uncovered by PEEL exhibit competitive performance with state-of-the-art pruning algorithms under various pruning settings. Our code is available at https://github.com/cardwing/Codes-for-PEEL.

Yuenan Hou, Zheng Ma, Chunxiao Liu et al.

We study the problem of distilling knowledge from a large deep teacher network to a much smaller student network for the task of road marking segmentation. In this work, we explore a novel knowledge distillation (KD) approach that can transfer 'knowledge' on scene structure more effectively from a teacher to a student model. Our method is known as Inter-Region Affinity KD (IntRA-KD). It decomposes a given road scene image into different regions and represents each region as a node in a graph. An inter-region affinity graph is then formed by establishing pairwise relationships between nodes based on their similarity in feature distribution. To learn structural knowledge from the teacher network, the student is required to match the graph generated by the teacher. The proposed method shows promising results on three large-scale road marking segmentation benchmarks, i.e., ApolloScape, CULane and LLAMAS, by taking various lightweight models as students and ResNet-101 as the teacher. IntRA-KD consistently brings higher performance gains on all lightweight models, compared to previous distillation methods. Our code is available at https://github.com/cardwing/Codes-for-IntRA-KD.

Linjie Deng, Yanxiang Gong, Xinchen Lu et al.

To achieve high coverage of target boxes, a normal strategy of conventional one-stage anchor-based detectors is to utilize multiple priors at each spatial position, especially in scene text detection tasks. In this work, we present a simple and intuitive method for multi-oriented text detection where each location of feature maps only associates with one reference box. The idea is inspired from the twostage R-CNN framework that can estimate the location of objects with any shape by using learned proposals. The aim of our method is to integrate this mechanism into a onestage detector and employ the learned anchor which is obtained through a regression operation to replace the original one into the final predictions. Based on RetinaNet, our method achieves competitive performances on several public benchmarks with a totally real-time efficiency (26:5fps at 800p), which surpasses all of anchor-based scene text detectors. In addition, with less attention on anchor design, we believe our method is easy to be applied on other analogous detection tasks. The code will publicly available at https://github.com/xhzdeng/stela.

Linjie Deng, Yanxiang Gong, Xinchen Lu et al.

Recently, scene text recognition methods based on deep learning have sprung up in computer vision area. The existing methods achieved great performances, but the recognition of irregular text is still challenging due to the various shapes and distorted patterns. Consider that at the time of reading words in the real world, normally we will not rectify it in our mind but adjust our focus and visual fields. Similarly, through utilizing deformable convolutional layers whose geometric structures are adjustable, we present an enhanced recognition network without the steps of rectification to deal with irregular text in this work. A number of experiments have been applied, where the results on public benchmarks demonstrate the effectiveness of our proposed components and shows that our method has reached satisfactory performances. The code will be publicly available at https://github.com/Alpaca07/dtr soon.

Yuenan Hou, Zheng Ma, Chunxiao Liu et al.

Training deep models for lane detection is challenging due to the very subtle and sparse supervisory signals inherent in lane annotations. Without learning from much richer context, these models often fail in challenging scenarios, e.g., severe occlusion, ambiguous lanes, and poor lighting conditions. In this paper, we present a novel knowledge distillation approach, i.e., Self Attention Distillation (SAD), which allows a model to learn from itself and gains substantial improvement without any additional supervision or labels. Specifically, we observe that attention maps extracted from a model trained to a reasonable level would encode rich contextual information. The valuable contextual information can be used as a form of 'free' supervision for further representation learning through performing topdown and layer-wise attention distillation within the network itself. SAD can be easily incorporated in any feedforward convolutional neural networks (CNN) and does not increase the inference time. We validate SAD on three popular lane detection benchmarks (TuSimple, CULane and BDD100K) using lightweight models such as ENet, ResNet-18 and ResNet-34. The lightest model, ENet-SAD, performs comparatively or even surpasses existing algorithms. Notably, ENet-SAD has 20 x fewer parameters and runs 10 x faster compared to the state-of-the-art SCNN, while still achieving compelling performance in all benchmarks. Our code is available at https://github.com/cardwing/Codes-for-Lane-Detection.

Linjie Deng, Yanxiang Gong, Yi Lin et al.

Previous approaches for scene text detection usually rely on manually defined sliding windows. This work presents an intuitive two-stage region-based method to detect multi-oriented text without any prior knowledge regarding the textual shape. In the first stage, we estimate the possible locations of text instances by detecting and linking corners instead of shifting a set of default anchors. The quadrilateral proposals are geometry adaptive, which allows our method to cope with various text aspect ratios and orientations. In the second stage, we design a new pooling layer named Dual-RoI Pooling which embeds data augmentation inside the region-wise subnetwork for more robust classification and regression over these proposals. Experimental results on public benchmarks confirm that the proposed method is capable of achieving comparable performance with state-of-the-art methods. The code is publicly available at https://github.com/xhzdeng/crpn

Jiazhen Chen, Xiuqin Liang, Sichao Fu et al.

Unsupervised graph anomaly detection (GAD) has received increasing attention in recent years, which aims to identify data anomalous patterns utilizing only unlabeled node information from graph-structured data. However, prevailing unsupervised GAD methods typically presuppose complete node attributes and structure information, a condition hardly satisfied in real-world scenarios owing to privacy, collection errors or dynamic node arrivals. Existing standard imputation schemes risk "repairing" rare anomalous nodes so that they appear normal, thereby introducing imputation bias into the detection process. In addition, when both node attributes and edges are missing simultaneously, estimation errors in one view can contaminate the other, causing cross-view interference that further undermines the detection performance. To overcome these challenges, we propose M$^2$V-UGAD, a multiple missing values-resistant unsupervised GAD framework on incomplete graphs. Specifically, a dual-pathway encoder is first proposed to independently reconstruct missing node attributes and graph structure, thereby preventing errors in one view from propagating to the other. The two pathways are then fused and regularized in a joint latent space so that normals occupy a compact inner manifold while anomalies reside on an outer shell. Lastly, to mitigate imputation bias, we sample latent codes just outside the normal region and decode them into realistic node features and subgraphs, providing hard negative examples that sharpen the decision boundary. Experiments on seven public benchmarks demonstrate that M$^2$V-UGAD consistently outperforms existing unsupervised GAD methods across varying missing rates.

Jishen Peng, Enze Jiang, Zheng Ma et al.

We develop a robust physics-guided diffusion framework for full-waveform inversion that combines a score-based generative prior with likelihood guidance computed through wave-equation simulations. We adopt a transport-based data-consistency potential (Wasserstein-2), incorporating wavefield enhancement via bounded weighting and observation-dependent normalization, thereby improving robustness to amplitude imbalance and time/phase misalignment. On the inference side, we introduce a preconditioned guided reverse-diffusion scheme that adapts the guidance strength and spatial scaling throughout the reverse-time dynamics, yielding a more stable and effective data-consistency guidance step than standard diffusion posterior sampling (DPS). Numerical experiments on OpenFWI datasets demonstrate improved reconstruction quality over deterministic optimization baselines and standard DPS under comparable computational budgets.

Chen Min, Enze Jiang, Jishen Peng et al.

Inverting real images into the noise space is essential for editing tasks using diffusion models, yet existing methods produce non-Gaussian noise with poor editability due to the inaccuracy in early noising steps. We identify the root cause: a mathematical singularity that renders inversion fundamentally ill-posed. We propose Singularity Skipping Inversion of Diffusion Models (SSI-DM), which bypasses this singular region by adding small noise before standard inversion. This simple approach produces inverted noise with natural Gaussian properties while maintaining reconstruction fidelity. As a plug-and-play technique compatible with general diffusion models, our method achieves superior performance on public image datasets for reconstruction and interpolation tasks, providing a principled and efficient solution to diffusion model inversion.

Zhipeng Ma, Bo Nørregaard Jørgensen, Zheng Ma

The transportation sector remains a major contributor to greenhouse gas emissions. The understanding of energy-efficient driving behaviors and utilization of energy-efficient driving strategies are essential to reduce vehicles' fuel consumption. However, there is no comprehensive investigation into energy-efficient driving behaviors and strategies. Furthermore, many state-of-the-art AI models have been applied for the analysis of eco-friendly driving styles, but no overview is available. To fill the gap, this paper conducts a thorough literature review on ecological driving behaviors and styles and analyzes the driving factors influencing energy consumption and state-of-the-art methodologies. With a thorough scoping review process, the methodological and related data are compared. The results show that the factors that impact driving behaviors can be summarized into eleven features including speed, acceleration, deceleration, pedal, and so on. This paper finds that supervised/unsupervised learning algorithms and reinforcement learning frameworks have been popularly used to model the vehicle's energy consumption with multi-dimensional data. Furthermore, the literature shows that the driving data are collected from either simulators or real-world experiments, and the real-world data are mainly stored and transmitted by meters, controller area networks, onboard data services, smartphones, and additional sensors installed in the vehicle. Based on driving behavior factors, driver characteristics, and safety rules, this paper recommends nine energy-efficient driving styles including four guidelines for the drivers' selection and adjustment of the vehicle parameters, three recommendations for the energy-efficient driving styles in different driving scenarios, and two subjective suggestions for different types of drivers and employers.

Balázs András Tolnai, Zheng Ma, Bo Nørregaard Jørgensen

Energy load disaggregation can contribute to balancing power grids by enhancing the effectiveness of demand-side management and promoting electricity-saving behavior through increased consumer awareness. However, the field currently lacks a comprehensive overview. To address this gap, this paper con-ducts a scoping review of load disaggregation domains, data types, and methods, by assessing 72 full-text journal articles. The findings reveal that domestic electricity consumption is the most researched area, while others, such as industrial load disaggregation, are rarely discussed. The majority of research uses relatively low-frequency data, sampled between 1 and 60 seconds. A wide variety of methods are used, and artificial neural networks are the most common, followed by optimization strategies, Hidden Markov Models, and Graph Signal Processing approaches.

Daniel Anthony Howard, Bo Nørregaard Jørgensen, Zheng Ma

Improving energy efficiency in industrial production processes is crucial for competitiveness, and compliance with climate policies. This paper introduces a data-driven approach to identify optimal melting patterns in induction furnaces. Through time-series K-means clustering the melting patterns could be classified into distinct clusters based on temperature profiles. Using the elbow method, 12 clusters were identified, representing the range of melting patterns. Performance parameters such as melting time, energy-specific performance, and carbon cost were established for each cluster, indicating furnace efficiency and environmental impact. Multiple criteria decision-making methods including Simple Additive Weighting, Multiplicative Exponential Weighting, Technique for Order of Preference by Similarity to Ideal Solution, modified TOPSIS, and VlseKriterijumska Optimizacija I Kompromisno Resenje were utilized to determine the best-practice cluster. The study successfully identified the cluster with the best performance. Implementing the best practice operation resulted in an 8.6 % reduction in electricity costs, highlighting the potential energy savings in the foundry.

Jiazhen Chen, Sichao Fu, Zhibin Zhang et al.

Few-shot graph anomaly detection (GAD) has recently garnered increasing attention, which aims to discern anomalous patterns among abundant unlabeled test nodes under the guidance of a limited number of labeled training nodes. Existing few-shot GAD approaches typically adopt meta-training methods trained on richly labeled auxiliary networks to facilitate rapid adaptation to target networks that possess sparse labels. However, these proposed methods often assume that the auxiliary and target networks exist in the same data distributions-an assumption rarely holds in practical settings. This paper explores a more prevalent and complex scenario of cross-domain few-shot GAD, where the goal is to identify anomalies within sparsely labeled target graphs using auxiliary graphs from a related, yet distinct domain. The challenge here is nontrivial owing to inherent data distribution discrepancies between the source and target domains, compounded by the uncertainties of sparse labeling in the target domain. In this paper, we propose a simple and effective framework, termed CDFS-GAD, specifically designed to tackle the aforementioned challenges. CDFS-GAD first introduces a domain-adaptive graph contrastive learning module, which is aimed at enhancing cross-domain feature alignment. Then, a prompt tuning module is further designed to extract domain-specific features tailored to each domain. Moreover, a domain-adaptive hypersphere classification loss is proposed to enhance the discrimination between normal and anomalous instances under minimal supervision, utilizing domain-sensitive norms. Lastly, a self-training strategy is introduced to further refine the predicted scores, enhancing its reliability in few-shot settings. Extensive experiments on twelve real-world cross-domain data pairs demonstrate the effectiveness of the proposed CDFS-GAD framework in comparison to various existing GAD methods.

Nan Zhou, Zheng Ma

In this paper, we put forward a neural network framework to solve the nonlinear hyperbolic systems. This framework, named relaxation neural networks(RelaxNN), is a simple and scalable extension of physics-informed neural networks(PINN). It is shown later that a typical PINN framework struggles to handle shock waves that arise in hyperbolic systems' solutions. This ultimately results in the failure of optimization that is based on gradient descent in the training process. Relaxation systems provide a smooth asymptotic to the discontinuity solution, under the expectation that macroscopic problems can be solved from a microscopic perspective. Based on relaxation systems, the RelaxNN framework alleviates the conflict of losses in the training process of the PINN framework. In addition to the remarkable results demonstrated in numerical simulations, most of the acceleration techniques and improvement strategies aimed at the standard PINN framework can also be applied to the RelaxNN framework.

Jiazhen Chen, Sichao Fu, Zheng Ma et al.

Semi-supervised graph anomaly detection (GAD) has recently received increasing attention, which aims to distinguish anomalous patterns from graphs under the guidance of a moderate amount of labeled data and a large volume of unlabeled data. Although these proposed semi-supervised GAD methods have achieved great success, their superior performance will be seriously degraded when the provided labels are extremely limited due to some unpredictable factors. Besides, the existing methods primarily focus on anomaly detection in static graphs, and little effort was paid to consider the continuous evolution characteristic of graphs over time (dynamic graphs). To address these challenges, we propose a novel GAD framework (EL$^{2}$-DGAD) to tackle anomaly detection problem in dynamic graphs with extremely limited labels. Specifically, a transformer-based graph encoder model is designed to more effectively preserve evolving graph structures beyond the local neighborhood. Then, we incorporate an ego-context hypersphere classification loss to classify temporal interactions according to their structure and temporal neighborhoods while ensuring the normal samples are mapped compactly against anomalous data. Finally, the above loss is further augmented with an ego-context contrasting module which utilizes unlabeled data to enhance model generalization. Extensive experiments on four datasets and three label rates demonstrate the effectiveness of the proposed method in comparison to the existing GAD methods.

Lingxing Kong, Yougang Chu, Zheng Ma et al.

Relation extraction is a critical task in the field of natural language processing with numerous real-world applications. Existing research primarily focuses on monolingual relation extraction or cross-lingual enhancement for relation extraction. Yet, there remains a significant gap in understanding relation extraction in the mix-lingual (or code-switching) scenario, where individuals intermix contents from different languages within sentences, generating mix-lingual content. Due to the lack of a dedicated dataset, the effectiveness of existing relation extraction models in such a scenario is largely unexplored. To address this issue, we introduce a novel task of considering relation extraction in the mix-lingual scenario called MixRE and constructing the human-annotated dataset MixRED to support this task. In addition to constructing the MixRED dataset, we evaluate both state-of-the-art supervised models and large language models (LLMs) on MixRED, revealing their respective advantages and limitations in the mix-lingual scenario. Furthermore, we delve into factors influencing model performance within the MixRE task and uncover promising directions for enhancing the performance of both supervised models and LLMs in this novel task.

Bo Hu, Han Yuan, Vlad Pandelea et al.

The rapid advancement of large language models (LLMs) has sparked widespread adoption across diverse applications, making robust evaluation frameworks crucial for assessing their performance. While conventional evaluation metrics remain applicable for shorter texts, their efficacy diminishes when evaluating the quality of long-form answers. This limitation is particularly critical in real-world scenarios involving extended questions, extensive context, and long-form answers, such as financial analysis or regulatory compliance. In this paper, we use a practical financial use case to illustrate applications that handle "long question-context-answer triplets". We construct a real-world financial dataset comprising long triplets and demonstrate the inadequacies of traditional metrics. To address this, we propose an effective Extract, Match, and Score (EMS) evaluation approach tailored to the complexities of long-form LLMs' outputs, providing practitioners with a reliable methodology for assessing LLMs' performance in complex real-world scenarios.

Enze Jiang, Jishen Peng, Zheng Ma et al.

In recent years we have witnessed a growth in mathematics for deep learning, which has been used to solve inverse problems of partial differential equations (PDEs). However, most deep learning-based inversion methods either require paired data or necessitate retraining neural networks for modifications in the conditions of the inverse problem, significantly reducing the efficiency of inversion and limiting its applicability. To overcome this challenge, in this paper, leveraging the score-based generative diffusion model, we introduce a novel unsupervised inversion methodology tailored for solving inverse problems arising from PDEs. Our approach operates within the Bayesian inversion framework, treating the task of solving the posterior distribution as a conditional generation process achieved through solving a reverse-time stochastic differential equation. Furthermore, to enhance the accuracy of inversion results, we propose an ODE-based Diffusion Posterior Sampling inversion algorithm. The algorithm stems from the marginal probability density functions of two distinct forward generation processes that satisfy the same Fokker-Planck equation. Through a series of experiments involving various PDEs, we showcase the efficiency and robustness of our proposed method.

Zhipeng Ma, Bo Nørregaard Jørgensen, Zheng Ma

Public transportation is a major source of greenhouse gas emissions, highlighting the need to improve bus fuel efficiency. Clustering algorithms assist in analyzing fuel efficiency by grouping data into clusters, but irrelevant features may complicate the analysis and choosing the optimal number of clusters remains a challenging task. Therefore, this paper employs the Gaussian mixture models to cluster the solo fuel-efficiency dataset. Moreover, an integration method that combines the Silhouette index, Calinski-Harabasz index, and Davies-Bouldin index is developed to select the optimal cluster numbers. A dataset with 4006 bus trips in North Jutland, Denmark is utilized as the case study. Trips are first split into three groups, then one group is divided further, resulting in four categories: extreme, normal, low, and extremely low fuel efficiency. A preliminary study using visualization analysis is conducted to investigate how driving behaviors and route conditions affect fuel efficiency. The results indicate that both individual driving habits and route characteristics have a significant influence on fuel efficiency.

Han Yuan, Yilin Wu, Li Zhang et al.

Small language models (SLMs) are increasingly used for financial classification due to their fast inference and local deployability. However, compared with large language models, SLMs are more prone to factual hallucinations in reasoning and exhibit weaker classification performance. This raises a natural question: Can mitigating factual hallucinations improve SLMs' financial classification? To address this, we propose a three-step pipeline named AAAI (Association Identification, Automated Detection, and Adaptive Inference). Experiments on three representative SLMs reveal that: (1) factual hallucinations are positively correlated with misclassifications; (2) encoder-based verifiers effectively detect factual hallucinations; and (3) incorporating feedback on factual errors enables SLMs' adaptive inference that enhances classification performance. We hope this pipeline contributes to trustworthy and effective applications of SLMs in finance.

Han Yuan, Yue Zhao, Li Zhang et al.

Structured output from large language models (LLMs) has enhanced efficiency in processing generated information and is increasingly adopted in industrial applications. Prior studies have investigated the impact of structured output on LLMs' generation quality, often presenting one-way findings. Some suggest that structured format enhances completeness and factual accuracy, while others argue that it restricts the reasoning capacity of LLMs and leads to reductions in standard evaluation metrics. Potential limitations of these assessments include restricted testing scenarios, weakly controlled comparative settings, and reliance on coarse metrics. In this work, we present a refined analysis using causal inference. Based on one assumed and two guaranteed constraints, we derive five potential causal structures characterizing the influence of structured output on LLMs' generation: (1) collider without m-bias, (2) collider with m-bias, (3) single cause from instruction, (4) single cause from output format, and (5) independence. Across seven public and one developed reasoning tasks, we find that coarse metrics report positive, negative, or neutral effects of structured output on GPT-4o's generation. However, causal inference reveals no causal impact in 43 out of 48 scenarios. In the remaining 5, 3 involve multifaceted causal structures influenced by concrete instructions.

Jiazhen Chen, Zheng Ma, Sichao Fu et al.

Graph class-incremental learning (GCIL) allows graph neural networks (GNNs) to adapt to evolving graph analytical tasks by incrementally learning new class knowledge while retaining knowledge of old classes. Existing GCIL methods primarily focus on a closed-set assumption, where all test samples are presumed to belong to previously known classes. Such an assumption restricts their applicability in real-world scenarios, where unknown classes naturally emerge during inference, and are absent during training. In this paper, we explore a more challenging open-set graph class-incremental learning scenario with two intertwined challenges: catastrophic forgetting of old classes, which impairs the detection of unknown classes, and inadequate open-set recognition, which destabilizes the retention of learned knowledge. To address the above problems, a novel OGCIL framework is proposed, which utilizes pseudo-sample embedding generation to effectively mitigate catastrophic forgetting and enable robust detection of unknown classes. To be specific, a prototypical conditional variational autoencoder is designed to synthesize node embeddings for old classes, enabling knowledge replay without storing raw graph data. To handle unknown classes, we employ a mixing-based strategy to generate out-of-distribution (OOD) samples from pseudo in-distribution and current node embeddings. A novel prototypical hypersphere classification loss is further proposed, which anchors in-distribution embeddings to their respective class prototypes, while repelling OOD embeddings away. Instead of assigning all unknown samples into one cluster, our proposed objective function explicitly models them as outliers through prototype-aware rejection regions, ensuring a robust open-set recognition. Extensive experiments on five benchmarks demonstrate the effectiveness of OGCIL over existing GCIL and open-set GNN methods.

Yekun Zhu, Min Tang, Zheng Ma

In this paper, we propose a novel neural network approach, termed DeepRTE, to address the steady-state Radiative Transfer Equation (RTE). The RTE is a differential-integral equation that governs the propagation of radiation through a participating medium, with applications spanning diverse domains such as neutron transport, atmospheric radiative transfer, heat transfer, and optical imaging. Our DeepRTE framework demonstrates superior computational efficiency for solving the steady-state RTE, surpassing traditional methods and existing neural network approaches. This efficiency is achieved by embedding physical information through derivation of the RTE and mathematically-informed network architecture. Concurrently, DeepRTE achieves high accuracy with significantly fewer parameters, largely due to its incorporation of mechanisms such as multi-head attention. Furthermore, DeepRTE is a mesh-free neural operator framework with inherent zero-shot capability. This is achieved by incorporating Green's function theory and pre-training with delta-function inflow boundary conditions into both its architecture design and training data construction. The efficacy of the proposed approach is substantiated through comprehensive numerical experiments.

Han Yuan, Li Zhang, Zheng Ma

Language models (LMs) have exhibited exceptional versatility in reasoning and in-depth financial analysis through their proprietary information processing capabilities. Previous research focused on evaluating classification performance while often overlooking explainability or pre-conceived that refined explanation corresponds to higher classification accuracy. Using a public dataset in finance domain, we quantitatively evaluated self-explanations by LMs, focusing on their factuality and causality. We identified the statistically significant relationship between the accuracy of classifications and the factuality or causality of self-explanations. Our study built an empirical foundation for approximating classification confidence through self-explanations and for optimizing classification via proprietary reasoning.

Zheng Ma, Zeping Mao, Ruixue Zhang et al.

Data-Independent Acquisition (DIA) was introduced to improve sensitivity to cover all peptides in a range rather than only sampling high-intensity peaks as in Data-Dependent Acquisition (DDA) mass spectrometry. However, it is not very clear how useful DIA data is for de novo peptide sequencing as the DIA data are marred with coeluted peptides, high noises, and varying data quality. We present a new deep learning method DIANovo, and address each of these difficulties, and improves the previous established systems by a large margin, via equipping the model with a deeper understanding of coeluted DIA spectra. This paper also provides criteria about when DIA data could be used for de novo peptide sequencing and when not to by providing a comparison between DDA and DIA, in both de novo and database search mode. We find that while DIA excels with narrow isolation windows on older-generation instruments, it loses its advantage with wider windows. However, with Orbitrap Astral, DIA consistently outperforms DDA due to narrow window mode enabled. We also provide a theoretical explanation of this phenomenon, emphasizing the critical role of the signal-to-noise profile in the successful application of de novo sequencing.

Lulu Zhang, Tao Luo, Yaoyu Zhang et al.

In this paper, we propose a a machine learning approach via model-operator-data network (MOD-Net) for solving PDEs. A MOD-Net is driven by a model to solve PDEs based on operator representation with regularization from data. For linear PDEs, we use a DNN to parameterize the Green's function and obtain the neural operator to approximate the solution according to the Green's method. To train the DNN, the empirical risk consists of the mean squared loss with the least square formulation or the variational formulation of the governing equation and boundary conditions. For complicated problems, the empirical risk also includes a few labels, which are computed on coarse grid points with cheap computation cost and significantly improves the model accuracy. Intuitively, the labeled dataset works as a regularization in addition to the model constraints. The MOD-Net solves a family of PDEs rather than a specific one and is much more efficient than original neural operator because few expensive labels are required. We numerically show MOD-Net is very efficient in solving Poisson equation and one-dimensional radiative transfer equation. For nonlinear PDEs, the nonlinear MOD-Net can be similarly used as an ansatz for solving nonlinear PDEs, exemplified by solving several nonlinear PDE problems, such as the Burgers equation.