Pinchen Xie

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2papers

2 Papers

BIO-PHMay 20, 2024
Coarse-graining conformational dynamics with multi-dimensional generalized Langevin equation: how, when, and why

Pinchen Xie, Yunrui Qiu, Weinan E

A data-driven ab initio generalized Langevin equation (AIGLE) approach is developed to learn and simulate high-dimensional, heterogeneous, coarse-grained conformational dynamics. Constrained by the fluctuation-dissipation theorem, the approach can build coarse-grained models in dynamical consistency with all-atom molecular dynamics. We also propose practical criteria for AIGLE to enforce long-term dynamical consistency. Case studies of a toy polymer, with 20 coarse-grained sites, and the alanine dipeptide, with two dihedral angles, elucidate why one should adopt AIGLE or its Markovian limit for modeling coarse-grained conformational dynamics in practice.

QUANT-PHJul 19, 2020Code
Coarse-grained spectral projection (CGSP): a deep learning-assisted approach to quantum unitary dynamics

Pinchen Xie, Weinan E

We propose the coarse-grained spectral projection method (CGSP), a deep learning-assisted approach for tackling quantum unitary dynamic problems with an emphasis on quench dynamics. We show CGSP can extract spectral components of many-body quantum states systematically with sophisticated neural network quantum ansatz. CGSP exploits fully the linear unitary nature of the quantum dynamics, and is potentially superior to other quantum Monte Carlo methods for ergodic dynamics. Preliminary numerical results on 1D XXZ models with periodic boundary condition are carried out to demonstrate the practicality of CGSP.