Philip Yu

CL
h-index13
22papers
4,910citations
Novelty55%
AI Score54

22 Papers

LGOct 28, 2022
Mitigating Health Disparities in EHR via Deconfounder

Zheng Liu, Xiaohan Li, Philip Yu

Health disparities, or inequalities between different patient demographics, are becoming crucial in medical decision-making, especially in Electronic Health Record (EHR) predictive modeling. To ensure the fairness of sensitive attributes, conventional studies mainly adopt calibration or re-weighting methods to balance the performance on among different demographic groups. However, we argue that these methods have some limitations. First, these methods usually mean a trade-off between the model's performance and fairness. Second, many methods completely attribute unfairness to the data collection process, which lacks substantial evidence. In this paper, we provide an empirical study to discover the possibility of using deconfounder to address the disparity issue in healthcare. Our study can be summarized in two parts. The first part is a pilot study demonstrating the exacerbation of disparity when unobserved confounders exist. The second part proposed a novel framework, Parity Medical Deconfounder (PriMeD), to deal with the disparity issue in healthcare datasets. Inspired by the deconfounder theory, PriMeD adopts a Conditional Variational Autoencoder (CVAE) to learn latent factors (substitute confounders) for observational data, and extensive experiments are provided to show its effectiveness.

LGAug 22, 2023
A Counterfactual Fair Model for Longitudinal Electronic Health Records via Deconfounder

Zheng Liu, Xiaohan Li, Philip Yu

The fairness issue of clinical data modeling, especially on Electronic Health Records (EHRs), is of utmost importance due to EHR's complex latent structure and potential selection bias. It is frequently necessary to mitigate health disparity while keeping the model's overall accuracy in practice. However, traditional methods often encounter the trade-off between accuracy and fairness, as they fail to capture the underlying factors beyond observed data. To tackle this challenge, we propose a novel model called Fair Longitudinal Medical Deconfounder (FLMD) that aims to achieve both fairness and accuracy in longitudinal Electronic Health Records (EHR) modeling. Drawing inspiration from the deconfounder theory, FLMD employs a two-stage training process. In the first stage, FLMD captures unobserved confounders for each encounter, which effectively represents underlying medical factors beyond observed EHR, such as patient genotypes and lifestyle habits. This unobserved confounder is crucial for addressing the accuracy/fairness dilemma. In the second stage, FLMD combines the learned latent representation with other relevant features to make predictions. By incorporating appropriate fairness criteria, such as counterfactual fairness, FLMD ensures that it maintains high prediction accuracy while simultaneously minimizing health disparities. We conducted comprehensive experiments on two real-world EHR datasets to demonstrate the effectiveness of FLMD. Apart from the comparison of baseline methods and FLMD variants in terms of fairness and accuracy, we assessed the performance of all models on disturbed/imbalanced and synthetic datasets to showcase the superiority of FLMD across different settings and provide valuable insights into its capabilities.

CLNov 4, 2022
Continuous Prompt Tuning Based Textual Entailment Model for E-commerce Entity Typing

Yibo Wang, Congying Xia, Guan Wang et al.

The explosion of e-commerce has caused the need for processing and analysis of product titles, like entity typing in product titles. However, the rapid activity in e-commerce has led to the rapid emergence of new entities, which is difficult to be solved by general entity typing. Besides, product titles in e-commerce have very different language styles from text data in general domain. In order to handle new entities in product titles and address the special language styles problem of product titles in e-commerce domain, we propose our textual entailment model with continuous prompt tuning based hypotheses and fusion embeddings for e-commerce entity typing. First, we reformulate the entity typing task into a textual entailment problem to handle new entities that are not present during training. Second, we design a model to automatically generate textual entailment hypotheses using a continuous prompt tuning method, which can generate better textual entailment hypotheses without manual design. Third, we utilize the fusion embeddings of BERT embedding and CharacterBERT embedding with a two-layer MLP classifier to solve the problem that the language styles of product titles in e-commerce are different from that of general domain. To analyze the effect of each contribution, we compare the performance of entity typing and textual entailment model, and conduct ablation studies on continuous prompt tuning and fusion embeddings. We also evaluate the impact of different prompt template initialization for the continuous prompt tuning. We show our proposed model improves the average F1 score by around 2% compared to the baseline BERT entity typing model.

IRNov 16, 2022
Mitigating Frequency Bias in Next-Basket Recommendation via Deconfounders

Xiaohan Li, Zheng Liu, Luyi Ma et al.

Recent studies on Next-basket Recommendation (NBR) have achieved much progress by leveraging Personalized Item Frequency (PIF) as one of the main features, which measures the frequency of the user's interactions with the item. However, taking the PIF as an explicit feature incurs bias towards frequent items. Items that a user purchases frequently are assigned higher weights in the PIF-based recommender system and appear more frequently in the personalized recommendation list. As a result, the system will lose the fairness and balance between items that the user frequently purchases and items that the user never purchases. We refer to this systematic bias on personalized recommendation lists as frequency bias, which narrows users' browsing scope and reduces the system utility. We adopt causal inference theory to address this issue. Considering the influence of historical purchases on users' future interests, the user and item representations can be viewed as unobserved confounders in the causal diagram. In this paper, we propose a deconfounder model named FENDER (Frequency-aware Deconfounder for Next-basket Recommendation) to mitigate the frequency bias. With the deconfounder theory and the causal diagram we propose, FENDER decomposes PIF with a neural tensor layer to obtain substitute confounders for users and items. Then, FENDER performs unbiased recommendations considering the effect of these substitute confounders. Experimental results demonstrate that FENDER has derived diverse and fair results compared to ten baseline models on three datasets while achieving competitive performance. Further experiments illustrate how FENDER balances users' historical purchases and potential interests.

46.4LGMay 20
A Deployment Audit of Release-Side Risk in Conformal Triage under Prevalence Shift

Chengze Li, Xiao Liu, Hanrong Zhang et al.

Conformal triage converts predictive scores into deployment actions that either release a case, flag it for urgent attention, or defer it to human review. Under prevalence shift, however, the usual summaries of marginal coverage and human-review rate can miss the safety-critical question of whether patients who truly experience the target event are released without review. To address this gap, we introduce a leakage-aware deployment audit for release-side conformal triage. It first assigns target subjects to three non-overlapping roles: prevalence correction, conformal calibration, and held-out release-safety evaluation. This separation then lets the audit evaluate release directly: how many event-positive patients are cleared without review, whether the pilot has enough event labels for calibration, and how the safety-review trade-off shifts. Applying this audit to a retrospective NSCLC pilot shows why lower review can be misleading: after prevalence correction, the pooled conformal branch lowers review by releasing more patients, some of whom are event-positive. Within the audit, the classwise branch acts as a scarcity diagnostic: the pilot has too few event labels to certify safe low-review release.

CLNov 13, 2025
ScaleFormer: Span Representation Cumulation for Long-Context Transformer

Jiangshu Du, Wenpeng Yin, Philip Yu

The quadratic complexity of standard self-attention severely limits the application of Transformer-based models to long-context tasks. While efficient Transformer variants exist, they often require architectural changes and costly pre-training from scratch. To circumvent this, we propose ScaleFormer(Span Representation Cumulation for Long-Context Transformer) - a simple and effective plug-and-play framework that adapts off-the-shelf pre-trained encoder-decoder models to process long sequences without requiring architectural modifications. Our approach segments long inputs into overlapping chunks and generates a compressed, context-aware representation for the decoder. The core of our method is a novel, parameter-free fusion mechanism that endows each chunk's representation with structural awareness of its position within the document. It achieves this by enriching each chunk's boundary representations with cumulative context vectors from all preceding and succeeding chunks. This strategy provides the model with a strong signal of the document's narrative flow, achieves linear complexity, and enables pre-trained models to reason effectively over long-form text. Experiments on long-document summarization show that our method is highly competitive with and often outperforms state-of-the-art approaches without requiring architectural modifications or external retrieval mechanisms.

79.5AIMay 9
FORTIS: Benchmarking Over-Privilege in Agent Skills

Shawn Li, Chenxiao Yu, Han Wang et al.

Large language model agents increasingly operate through an intermediate skill layer that mediates between user intent and concrete task execution. This layer is widely treated as an organizational abstraction, but we argue it is also a privilege boundary that current models routinely exceed. We present \textbf{FORTIS}, a benchmark that evaluates over-privilege in agent skills across two stages: whether a model selects the minimally sufficient skill from a large overlapping library, and whether it executes that skill without expanding into broader tools or actions than the skill permits. Across ten frontier models and three domains, we find that over-privileged behavior is the norm rather than the exception. Models consistently reach for higher-privilege skills and tools than the task requires, failing at both stages at rates that remain high even for the strongest available models. Failure is especially severe under the ordinary conditions of real user interaction: incomplete specification, convenience framing, and proximity to skill boundaries. None of these requires adversarial construction. The results indicate that the skill layer, far from containing agent behavior, is itself a primary source of privilege escalation in current systems.

LGJan 2, 2024
Motif-aware Riemannian Graph Neural Network with Generative-Contrastive Learning

Li Sun, Zhenhao Huang, Zixi Wang et al.

Graphs are typical non-Euclidean data of complex structures. In recent years, Riemannian graph representation learning has emerged as an exciting alternative to Euclidean ones. However, Riemannian methods are still in an early stage: most of them present a single curvature (radius) regardless of structural complexity, suffer from numerical instability due to the exponential/logarithmic map, and lack the ability to capture motif regularity. In light of the issues above, we propose the problem of \emph{Motif-aware Riemannian Graph Representation Learning}, seeking a numerically stable encoder to capture motif regularity in a diverse-curvature manifold without labels. To this end, we present a novel Motif-aware Riemannian model with Generative-Contrastive learning (MotifRGC), which conducts a minmax game in Riemannian manifold in a self-supervised manner. First, we propose a new type of Riemannian GCN (D-GCN), in which we construct a diverse-curvature manifold by a product layer with the diversified factor, and replace the exponential/logarithmic map by a stable kernel layer. Second, we introduce a motif-aware Riemannian generative-contrastive learning to capture motif regularity in the constructed manifold and learn motif-aware node representation without external labels. Empirical results show the superiority of MofitRGC.

LGFeb 5, 2025
RiemannGFM: Learning a Graph Foundation Model from Riemannian Geometry

Li Sun, Zhenhao Huang, Suyang Zhou et al.

The foundation model has heralded a new era in artificial intelligence, pretraining a single model to offer cross-domain transferability on different datasets. Graph neural networks excel at learning graph data, the omnipresent non-Euclidean structure, but often lack the generalization capacity. Hence, graph foundation model is drawing increasing attention, and recent efforts have been made to leverage Large Language Models. On the one hand, existing studies primarily focus on text-attributed graphs, while a wider range of real graphs do not contain fruitful textual attributes. On the other hand, the sequential graph description tailored for the Large Language Model neglects the structural complexity, which is a predominant characteristic of the graph. Such limitations motivate an important question: Can we go beyond Large Language Models, and pretrain a universal model to learn the structural knowledge for any graph? The answer in the language or vision domain is a shared vocabulary. We observe the fact that there also exist shared substructures underlying graph domain, and thereby open a new opportunity of graph foundation model with structural vocabulary. The key innovation is the discovery of a simple yet effective structural vocabulary of trees and cycles, and we explore its inherent connection to Riemannian geometry. Herein, we present a universal pretraining model, RiemannGFM. Concretely, we first construct a novel product bundle to incorporate the diverse geometries of the vocabulary. Then, on this constructed space, we stack Riemannian layers where the structural vocabulary, regardless of specific graph, is learned in Riemannian manifold offering cross-domain transferability. Extensive experiments show the effectiveness of RiemannGFM on a diversity of real graphs.

LGMar 29, 2024
Beyond the Known: Novel Class Discovery for Open-world Graph Learning

Yucheng Jin, Yun Xiong, Juncheng Fang et al.

Node classification on graphs is of great importance in many applications. Due to the limited labeling capability and evolution in real-world open scenarios, novel classes can emerge on unlabeled testing nodes. However, little attention has been paid to novel class discovery on graphs. Discovering novel classes is challenging as novel and known class nodes are correlated by edges, which makes their representations indistinguishable when applying message passing GNNs. Furthermore, the novel classes lack labeling information to guide the learning process. In this paper, we propose a novel method Open-world gRAph neuraL network (ORAL) to tackle these challenges. ORAL first detects correlations between classes through semi-supervised prototypical learning. Inter-class correlations are subsequently eliminated by the prototypical attention network, leading to distinctive representations for different classes. Furthermore, to fully explore multi-scale graph features for alleviating label deficiencies, ORAL generates pseudo-labels by aligning and ensembling label estimations from multiple stacked prototypical attention networks. Extensive experiments on several benchmark datasets show the effectiveness of our proposed method.

IRFeb 1, 2025
Solving the Content Gap in Roblox Game Recommendations: LLM-Based Profile Generation and Reranking

Chen Wang, Xiaokai Wei, Yexi Jiang et al.

With the vast and dynamic user-generated content on Roblox, creating effective game recommendations requires a deep understanding of game content. Traditional recommendation models struggle with the inconsistent and sparse nature of game text features such as titles and descriptions. Recent advancements in large language models (LLMs) offer opportunities to enhance recommendation systems by analyzing in-game text data. This paper addresses two challenges: generating high-quality, structured text features for games without extensive human annotation, and validating these features to ensure they improve recommendation relevance. We propose an approach that extracts in-game text and uses LLMs to infer attributes such as genre and gameplay objectives from raw player interactions. Additionally, we introduce an LLM-based re-ranking mechanism to assess the effectiveness of the generated text features, enhancing personalization and user satisfaction. Beyond recommendations, our approach supports applications such as user engagement-based integrity detection, already deployed in production. This scalable framework demonstrates the potential of in-game text understanding to improve recommendation quality on Roblox and adapt recommendations to its unique, user-generated ecosystem.

LGApr 23, 2024
Uncertainty Quantification on Graph Learning: A Survey

Chao Chen, Chenghua Guo, Rui Xu et al.

Graphical models have demonstrated their exceptional capabilities across numerous applications, such as social networks, citation networks, and online recommendation systems. However, their performance, confidence, and trustworthiness are often limited by the inherent randomness in data and the challenges of accurately modeling real-world complexities. There has been increased interest in developing uncertainty quantification (UQ) techniques tailored to graphical models. In this survey, we comprehensively examine existing works on UQ for graphical models, focusing on key aspects such as the sources, representation, handling, and evaluation of uncertainty. This survey distinguishes itself from most existing UQ surveys by specifically concentrating on UQ in graphical models, including probabilistic graphical models (PGMs) and graph neural networks (GNNs). After reviewing sources of uncertainty, we organize the work using two high-level dimensions: uncertainty representation and uncertainty handling. By offering a comprehensive overview of the current landscape, including both established methodologies and emerging trends, we aim to bridge gaps in understanding key challenges and opportunities in UQ for graphical models, hoping to inspire researchers working on graphical models or uncertainty quantification to make further advancements at the cross of the two fields.

CLSep 13, 2021
Few-Shot Intent Detection via Contrastive Pre-Training and Fine-Tuning

Jianguo Zhang, Trung Bui, Seunghyun Yoon et al.

In this work, we focus on a more challenging few-shot intent detection scenario where many intents are fine-grained and semantically similar. We present a simple yet effective few-shot intent detection schema via contrastive pre-training and fine-tuning. Specifically, we first conduct self-supervised contrastive pre-training on collected intent datasets, which implicitly learns to discriminate semantically similar utterances without using any labels. We then perform few-shot intent detection together with supervised contrastive learning, which explicitly pulls utterances from the same intent closer and pushes utterances across different intents farther. Experimental results show that our proposed method achieves state-of-the-art performance on three challenging intent detection datasets under 5-shot and 10-shot settings.

CLMay 3, 2021
Pseudo Siamese Network for Few-shot Intent Generation

Congying Xia, Caiming Xiong, Philip Yu

Few-shot intent detection is a challenging task due to the scare annotation problem. In this paper, we propose a Pseudo Siamese Network (PSN) to generate labeled data for few-shot intents and alleviate this problem. PSN consists of two identical subnetworks with the same structure but different weights: an action network and an object network. Each subnetwork is a transformer-based variational autoencoder that tries to model the latent distribution of different components in the sentence. The action network is learned to understand action tokens and the object network focuses on object-related expressions. It provides an interpretable framework for generating an utterance with an action and an object existing in a given intent. Experiments on two real-world datasets show that PSN achieves state-of-the-art performance for the generalized few shot intent detection task.

CLApr 24, 2021
Incremental Few-shot Text Classification with Multi-round New Classes: Formulation, Dataset and System

Congying Xia, Wenpeng Yin, Yihao Feng et al.

Text classification is usually studied by labeling natural language texts with relevant categories from a predefined set. In the real world, new classes might keep challenging the existing system with limited labeled data. The system should be intelligent enough to recognize upcoming new classes with a few examples. In this work, we define a new task in the NLP domain, incremental few-shot text classification, where the system incrementally handles multiple rounds of new classes. For each round, there is a batch of new classes with a few labeled examples per class. Two major challenges exist in this new task: (i) For the learning process, the system should incrementally learn new classes round by round without re-training on the examples of preceding classes; (ii) For the performance, the system should perform well on new classes without much loss on preceding classes. In addition to formulating the new task, we also release two benchmark datasets in the incremental few-shot setting: intent classification and relation classification. Moreover, we propose two entailment approaches, ENTAILMENT and HYBRID, which show promise for solving this novel problem.

CLSep 21, 2020
Composed Variational Natural Language Generation for Few-shot Intents

Congying Xia, Caiming Xiong, Philip Yu et al.

In this paper, we focus on generating training examples for few-shot intents in the realistic imbalanced scenario. To build connections between existing many-shot intents and few-shot intents, we consider an intent as a combination of a domain and an action, and propose a composed variational natural language generator (CLANG), a transformer-based conditional variational autoencoder. CLANG utilizes two latent variables to represent the utterances corresponding to two different independent parts (domain and action) in the intent, and the latent variables are composed together to generate natural examples. Additionally, to improve the generator learning, we adopt the contrastive regularization loss that contrasts the in-class with the out-of-class utterance generation given the intent. To evaluate the quality of the generated utterances, experiments are conducted on the generalized few-shot intent detection task. Empirical results show that our proposed model achieves state-of-the-art performances on two real-world intent detection datasets.

CVJul 30, 2020
Multi-label Zero-shot Classification by Learning to Transfer from External Knowledge

He Huang, Yuanwei Chen, Wei Tang et al.

Multi-label zero-shot classification aims to predict multiple unseen class labels for an input image. It is more challenging than its single-label counterpart. On one hand, the unconstrained number of labels assigned to each image makes the model more easily overfit to those seen classes. On the other hand, there is a large semantic gap between seen and unseen classes in the existing multi-label classification datasets. To address these difficult issues, this paper introduces a novel multi-label zero-shot classification framework by learning to transfer from external knowledge. We observe that ImageNet is commonly used to pretrain the feature extractor and has a large and fine-grained label space. This motivates us to exploit it as external knowledge to bridge the seen and unseen classes and promote generalization. Specifically, we construct a knowledge graph including not only classes from the target dataset but also those from ImageNet. Since ImageNet labels are not available in the target dataset, we propose a novel PosVAE module to infer their initial states in the extended knowledge graph. Then we design a relational graph convolutional network (RGCN) to propagate information among classes and achieve knowledge transfer. Experimental results on two benchmark datasets demonstrate the effectiveness of the proposed approach.

CLApr 4, 2020
CG-BERT: Conditional Text Generation with BERT for Generalized Few-shot Intent Detection

Congying Xia, Chenwei Zhang, Hoang Nguyen et al.

In this paper, we formulate a more realistic and difficult problem setup for the intent detection task in natural language understanding, namely Generalized Few-Shot Intent Detection (GFSID). GFSID aims to discriminate a joint label space consisting of both existing intents which have enough labeled data and novel intents which only have a few examples for each class. To approach this problem, we propose a novel model, Conditional Text Generation with BERT (CG-BERT). CG-BERT effectively leverages a large pre-trained language model to generate text conditioned on the intent label. By modeling the utterance distribution with variational inference, CG-BERT can generate diverse utterances for the novel intents even with only a few utterances available. Experimental results show that CG-BERT achieves state-of-the-art performance on the GFSID task with 1-shot and 5-shot settings on two real-world datasets.

CLApr 2, 2020
MZET: Memory Augmented Zero-Shot Fine-grained Named Entity Typing

Tao Zhang, Congying Xia, Chun-Ta Lu et al.

Named entity typing (NET) is a classification task of assigning an entity mention in the context with given semantic types. However, with the growing size and granularity of the entity types, rare researches in previous concern with newly emerged entity types. In this paper, we propose MZET, a novel memory augmented FNET (Fine-grained NET) model, to tackle the unseen types in a zero-shot manner. MZET incorporates character-level, word-level, and contextural-level information to learn the entity mention representation. Besides, MZET considers the semantic meaning and the hierarchical structure into the entity type representation. Finally, through the memory component which models the relationship between the entity mention and the entity type, MZET transfer the knowledge from seen entity types to the zero-shot ones. Extensive experiments on three public datasets show prominent performance obtained by MZET, which surpasses the state-of-the-art FNET neural network models with up to 7% gain in Micro-F1 and Macro-F1 score.

LGMar 24, 2020
Learn to Forget: Machine Unlearning via Neuron Masking

Yang Liu, Zhuo Ma, Ximeng Liu et al.

Nowadays, machine learning models, especially neural networks, become prevalent in many real-world applications.These models are trained based on a one-way trip from user data: as long as users contribute their data, there is no way to withdraw; and it is well-known that a neural network memorizes its training data. This contradicts the "right to be forgotten" clause of GDPR, potentially leading to law violations. To this end, machine unlearning becomes a popular research topic, which allows users to eliminate memorization of their private data from a trained machine learning model.In this paper, we propose the first uniform metric called for-getting rate to measure the effectiveness of a machine unlearning method. It is based on the concept of membership inference and describes the transformation rate of the eliminated data from "memorized" to "unknown" after conducting unlearning. We also propose a novel unlearning method calledForsaken. It is superior to previous work in either utility or efficiency (when achieving the same forgetting rate). We benchmark Forsaken with eight standard datasets to evaluate its performance. The experimental results show that it can achieve more than 90\% forgetting rate on average and only causeless than 5\% accuracy loss.

CLFeb 27, 2020
Adv-BERT: BERT is not robust on misspellings! Generating nature adversarial samples on BERT

Lichao Sun, Kazuma Hashimoto, Wenpeng Yin et al.

There is an increasing amount of literature that claims the brittleness of deep neural networks in dealing with adversarial examples that are created maliciously. It is unclear, however, how the models will perform in realistic scenarios where \textit{natural rather than malicious} adversarial instances often exist. This work systematically explores the robustness of BERT, the state-of-the-art Transformer-style model in NLP, in dealing with noisy data, particularly mistakes in typing the keyboard, that occur inadvertently. Intensive experiments on sentiment analysis and question answering benchmarks indicate that: (i) Typos in various words of a sentence do not influence equally. The typos in informative words make severer damages; (ii) Mistype is the most damaging factor, compared with inserting, deleting, etc.; (iii) Humans and machines have different focuses on recognizing adversarial attacks.

CLJun 20, 2019
Multi-Grained Named Entity Recognition

Congying Xia, Chenwei Zhang, Tao Yang et al.

This paper presents a novel framework, MGNER, for Multi-Grained Named Entity Recognition where multiple entities or entity mentions in a sentence could be non-overlapping or totally nested. Different from traditional approaches regarding NER as a sequential labeling task and annotate entities consecutively, MGNER detects and recognizes entities on multiple granularities: it is able to recognize named entities without explicitly assuming non-overlapping or totally nested structures. MGNER consists of a Detector that examines all possible word segments and a Classifier that categorizes entities. In addition, contextual information and a self-attention mechanism are utilized throughout the framework to improve the NER performance. Experimental results show that MGNER outperforms current state-of-the-art baselines up to 4.4% in terms of the F1 score among nested/non-overlapping NER tasks.