Muhammad Tahir

Muhammad Tahir, Muhammad Mubbashar Baig, Umer Irfan et al.

Batteryless IoT systems have largely followed two paths: ambient-energy sensing, where energy arrival is decoupled from the event being monitored, and kinetic event telegrams, where a user actuation powers a short report of the actuation itself. Mechanically gated states expose a third case: the access motion is not only an event to report, but the moment at which a latent physical state may have changed and must be measured. We show that routine hinge motion can supply enough energy for one bounded wake-sense-transmit transaction, including ultrasonic sensing and a long-range LoRa uplink. We call this principle motion-coupled sensing and instantiate it with an open-source compact electromagnetic harvester that retrofits to bins, doors, and cabinets with no structural modification. We size the platform for the most demanding workload, waste-bin monitoring, where each actuation must power both an ultrasonic measurement and a long-range LoRa uplink. Across five campus locations and 5,945 lid actuations, the bin deployment achieves 99.3% per-event transmission reliability. Field deployments on room doors with 1,870 actuations and office cabinets with 1,636 actuations achieve 92% and 94% transmission success respectively, demonstrating that the same energy envelope transfers across hinge geometries without hardware redesign. These results show that mechanical access can be treated as a self-powered sensing transaction, removing periodic polling and scheduled battery maintenance for IoT deployments.

Muhammad Abdul Rahman, Muhammad Aamir Basheer, Zubair Khalid et al.

Logistic hubs play a pivotal role in the last-mile delivery distance; even a slight increment in distance negatively impacts the business of the e-commerce industry while also increasing its carbon footprint. The growth of this industry, particularly after Covid-19, has further intensified the need for optimized allocation of resources in an urban environment. In this study, we use a hybrid approach to optimize the placement of logistic hubs. The approach sequentially employs different techniques. Initially, delivery points are clustered using K-Means in relation to their spatial locations. The clustering method utilizes road network distances as opposed to Euclidean distances. Non-road network-based approaches have been avoided since they lead to erroneous and misleading results. Finally, hubs are located using the P-Median method. The P-Median method also incorporates the number of deliveries and population as weights. Real-world delivery data from Muller and Phipps (M&P) is used to demonstrate the effectiveness of the approach. Serving deliveries from the optimal hub locations results in the saving of 815 (10%) meters per delivery.

Sheraz Hassan, Muhammad Tahir, Momin Uppal et al.

Accurately predicting the demand for ride-hailing services can result in significant benefits such as more effective surge pricing strategies, improved driver positioning, and enhanced customer service. By understanding the demand fluctuations, companies can anticipate and respond to consumer requirements more efficiently, leading to increased efficiency and revenue. However, forecasting demand in a particular region can be challenging, as it is influenced by several external factors, such as time of day, weather conditions, and location. Thus, understanding and evaluating these factors is essential for predicting consumer behavior and adapting to their needs effectively. Grid-based deep learning approaches have proven effective in predicting regional taxi demand. However, these models have limitations in integrating external factors in their spatiotemporal complexity and maintaining high accuracy over extended time horizons without continuous retraining, which makes them less suitable for practical and commercial applications. To address these limitations, this paper introduces STEF-DHNet, a demand prediction model that combines Convolutional Neural Network (CNN) and Long Short-Term Memory (LSTM) to integrate external features as spatiotemporal information and capture their influence on ride-hailing demand. The proposed model is evaluated using a long-term performance metric called the rolling error, which assesses its ability to maintain high accuracy over long periods without retraining. The results show that STEF-DHNet outperforms existing state-of-the-art methods on three diverse datasets, demonstrating its potential for practical use in real-world scenarios.

Muhammad Abdul Rahman, Muhammad Ahmad Waseem, Zubair Khalid et al.

Any policy-level decision-making procedure and academic research involving the optimum use of resources for development and planning initiatives depends on accurate population density statistics. The current cutting-edge datasets offered by WorldPop and Meta do not succeed in achieving this aim for developing nations like Pakistan; the inputs to their algorithms provide flawed estimates that fail to capture the spatial and land-use dynamics. In order to precisely estimate population counts at a resolution of 30 meters by 30 meters, we use an accurate built settlement mask obtained using deep segmentation networks and satellite imagery. The Points of Interest (POI) data is also used to exclude non-residential areas.

Shoaib Imran, Muhammad Tahir, Zubair Khalid et al.

Low-rank and sparse decomposition based methods find their use in many applications involving background modeling such as clutter suppression and object tracking. While Robust Principal Component Analysis (RPCA) has achieved great success in performing this task, it can take hundreds of iterations to converge and its performance decreases in the presence of different phenomena such as occlusion, jitter and fast motion. The recently proposed deep unfolded networks, on the other hand, have demonstrated better accuracy and improved convergence over both their iterative equivalents as well as over other neural network architectures. In this work, we propose a novel deep unfolded spatiotemporal RPCA (DUST-RPCA) network, which explicitly takes advantage of the spatial and temporal continuity in the low-rank component. Our experimental results on the moving MNIST dataset indicate that DUST-RPCA gives better accuracy when compared with the existing state of the art deep unfolded RPCA networks.

Aarash Abro, Muhammad Tahir

Fine-tuning a language model for a target task routinely degrades capabilities the training data never explicitly threatened. We study this phenomenon, known as catastrophic forgetting, and propose a post-hoc repair solution that uses only the pretrained checkpoint $W_{\mathrm{base}}$ and its fine-tuned descendant $W_{\mathrm{ft}}$. The goal is not merely to revert the model toward the base checkpoint, but to recover capabilities damaged by fine-tuning while preserving both the target-task gains and any beneficial held-out improvements. We introduce DG-Hard, a checkpoint-only spectral repair method for the fine-tuning update $Δ= W_{\mathrm{ft}} - W_{\mathrm{base}}$. DG-Hard treats $Δ$ as a low-rank task-aligned signal embedded in an IID-like noise residual that gradient descent has no incentive to remove, and applies the Donoho-Gavish hard singular-value threshold to each weight-delta matrix, keeping the structured high-energy part of the update and removing the spectral bulk. This reduces repair to a closed-form SVD filtering step requiring no data-dependent tuning. A central difficulty is evaluation: average accuracy hides per-benchmark failures, while naive recovery scores reward models that simply revert toward the base. We therefore introduce a partition-conditional metric that separately tracks healing, preservation, non-damage, and target-task retention. Across $14$ (model, task) settings and nine cross-domain held-out benchmarks, DG-Hard achieves the strongest balanced repair among post-hoc baselines. DG-Hard also restores safety alignment degraded by benign fine-tuning on three independent safety axes, despite using no alignment data. These results suggest that part of fine-tuning-induced capability loss is not an unavoidable consequence of specialization, but a removable spectral residue in the weight update itself.

Muhammad Ahmad Waseem, Muhammad Tahir, Zubair Khalid et al.

This paper considers the problem of extracting building footprints from satellite imagery -- a task that is critical for many urban planning and decision-making applications. While recent advancements in deep learning have made great strides in automated detection of building footprints, state-of-the-art methods available in existing literature often generate erroneous results for areas with densely connected buildings. Moreover, these methods do not incorporate the context of neighborhood images during training thus generally resulting in poor performance at image boundaries. In light of these gaps, we propose a novel Tuning Fork Network (TFNet) design for deep semantic segmentation that not only performs well for widely-spaced building but also has good performance for buildings that are closely packed together. The novelty of TFNet architecture lies in a a single encoder followed by two parallel decoders to separately reconstruct the building footprint and the building edge. In addition, the TFNet design is coupled with a novel methodology of incorporating neighborhood information at the tile boundaries during the training process. This methodology further improves performance, especially at the tile boundaries. For performance comparisons, we utilize the SpaceNet2 and WHU datasets, as well as a dataset from an area in Lahore, Pakistan that captures closely connected buildings. For all three datasets, the proposed methodology is found to significantly outperform benchmark methods.

Muhammad Tahir, Shehroz S. Khan, James Davie et al.

In mammalian and vertebrate genomes, the promoter regions of the gene and their distal enhancers may be located millions of base-pairs from each other, while a promoter may not interact with the closest enhancer. Since base-pair proximity is not a good indicator of these interactions, there is considerable work toward developing methods for predicting Enhancer-Promoter Interactions (EPI). Several machine learning methods have reported increasingly higher accuracies for predicting EPI. Typically, these approaches randomly split the dataset of Enhancer-Promoter (EP) pairs into training and testing subsets followed by model training. However, the aforementioned random splitting causes information leakage by assigning EP pairs from the same genomic region to both testing and training sets, leading to performance overestimation. In this paper we propose to use a more thorough training and testing paradigm i.e., Leave-one-chromosome-out (LOCO) cross-validation for EPI-prediction. We demonstrate that a deep learning algorithm, which gives higher accuracies when trained and tested on random-splitting setting, drops drastically in performance under LOCO setting, confirming overestimation of performance. We further propose a novel hybrid deep neural network for EPI-prediction that fuses k-mer features of the nucleotide sequence. We show that the hybrid architecture performs significantly better in the LOCO setting, demonstrating it can learn more generalizable aspects of EP interactions. With this paper we are also releasing the LOCO splitting-based EPI dataset. Research data is available in this public repository: https://github.com/malikmtahir/EPI

Saeed Anwar, Muhammad Tahir, Chongyi Li et al.

Image colorization estimates RGB colors for grayscale images or video frames to improve their aesthetic and perceptual quality. Over the last decade, deep learning techniques for image colorization have significantly progressed, necessitating a systematic survey and benchmarking of these techniques. This article presents a comprehensive survey of recent state-of-the-art deep learning-based image colorization techniques, describing their fundamental block architectures, inputs, optimizers, loss functions, training protocols, training data, etc. It categorizes the existing colorization techniques into seven classes and discusses important factors governing their performance, such as benchmark datasets and evaluation metrics. We highlight the limitations of existing datasets and introduce a new dataset specific to colorization. We perform an extensive experimental evaluation of existing image colorization methods using both existing datasets and our proposed one. Finally, we discuss the limitations of existing methods and recommend possible solutions and future research directions for this rapidly evolving topic of deep image colorization. The dataset and codes for evaluation are publicly available at https://github.com/saeed-anwar/ColorSurvey.

Muhammad Tahir, Mahboobeh Norouzi, Shehroz S. Khan et al.

Epigenetics encompasses mechanisms that can alter the expression of genes without changing the underlying genetic sequence. The epigenetic regulation of gene expression is initiated and sustained by several mechanisms such as DNA methylation, histone modifications, chromatin conformation, and non-coding RNA. The changes in gene regulation and expression can manifest in the form of various diseases and disorders such as cancer and congenital deformities. Over the last few decades, high throughput experimental approaches have been used to identify and understand epigenetic changes, but these laboratory experimental approaches and biochemical processes are time-consuming and expensive. To overcome these challenges, machine learning and artificial intelligence (AI) approaches have been extensively used for mapping epigenetic modifications to their phenotypic manifestations. In this paper we provide a narrative review of published research on AI models trained on epigenomic data to address a variety of problems such as prediction of disease markers, gene expression, enhancer promoter interaction, and chromatin states. The purpose of this review is twofold as it is addressed to both AI experts and epigeneticists. For AI researchers, we provided a taxonomy of epigenetics research problems that can benefit from an AI-based approach. For epigeneticists, given each of the above problems we provide a list of candidate AI solutions in the literature. We have also identified several gaps in the literature, research challenges, and recommendations to address these challenges.

Arslan Majal, Aamir Hussain Chughtai, Muhammad Tahir

We present a learning-based outlier-robust filter for a general setup where the measurement noise can be correlated. Since it is an enhanced version of EM-based outlier robust filter (EMORF), we call it as EMORF-II. As it is equipped with an additional powerful feature to learn the outlier characteristics during inference along with outlier-detection, EMORF-II has improved outlier-mitigation capability. Numerical experiments confirm performance gains as compared to the state-of-the-art methods in terms of accuracy with an increased computational overhead. However, thankfully the computational complexity order remains at par with other practical methods making it a useful choice for diverse applications.

Osama Ahmad, Zubair Khalid, Muhammad Tahir et al.

Monitoring air pollution is crucial for protecting human health from exposure to harmful substances. Traditional methods of air quality monitoring, such as ground-based sensors and satellite-based remote sensing, face limitations due to high deployment costs, sparse sensor coverage, and environmental interferences. To address these challenges, this paper proposes a framework for high-resolution spatiotemporal Air Quality Index (AQI) mapping using sparse sensor data, satellite imagery, and various spatiotemporal factors. By leveraging Graph Neural Networks (GNNs), we estimate AQI values at unmonitored locations based on both spatial and temporal dependencies. The framework incorporates a wide range of environmental features, including meteorological data, road networks, points of interest (PoIs), population density, and urban green spaces, which enhance prediction accuracy. We illustrate the use of our approach through a case study in Lahore, Pakistan, where multi-resolution data is used to generate the air quality index map at a fine spatiotemporal scale.

Usman Nazir, Momin Uppal, Muhammad Tahir et al.

This paper proposes a multi-spectral random forest classifier with suitable feature selection and masking for tree cover estimation in urban areas. The key feature of the proposed classifier is filtering out the built-up region using spectral indices followed by random forest classification on the remaining mask with carefully selected features. Using Sentinel-2 satellite imagery, we evaluate the performance of the proposed technique on a specified area (approximately 82 acres) of Lahore University of Management Sciences (LUMS) and demonstrate that our method outperforms a conventional random forest classifier as well as state-of-the-art methods such as European Space Agency (ESA) WorldCover 10m 2020 product as well as a DeepLabv3 deep learning architecture.

Abbas Anwar, Saira Kanwal, Muhammad Tahir et al.

Automatic image aesthetics assessment is a computer vision problem dealing with categorizing images into different aesthetic levels. The categorization is usually done by analyzing an input image and computing some measure of the degree to which the image adheres to the fundamental principles of photography such as balance, rhythm, harmony, contrast, unity, look, feel, tone and texture. Due to its diverse applications in many areas, automatic image aesthetic assessment has gained significant research attention in recent years. This article presents a review of the contemporary automatic image aesthetics assessment techniques. Many traditional hand-crafted and deep learning-based approaches are reviewed, and critical problem aspects are discussed, including why some features or models perform better than others and the limitations. A comparison of the quantitative results of different methods is also provided.

Muhammad Tahir, Saeed Anwar, Ajmal Mian et al.

Accurate localization of proteins from fluorescence microscopy images is challenging due to the inter-class similarities and intra-class disparities introducing grave concerns in addressing multi-class classification problems. Conventional machine learning-based image prediction pipelines rely heavily on pre-processing such as normalization and segmentation followed by hand-crafted feature extraction to identify useful, informative, and application-specific features. Here, we demonstrate that deep learning-based pipelines can effectively classify protein images from different datasets. We propose an end-to-end Protein Localization Convolutional Neural Network (PLCNN) that classifies protein images more accurately and reliably. PLCNN processes raw imagery without involving any pre-processing steps and produces outputs without any customization or parameter adjustment for a particular dataset. Experimental analysis is performed on five benchmark datasets. PLCNN consistently outperformed the existing state-of-the-art approaches from traditional machine learning and deep architectures. This study highlights the importance of deep learning for the analysis of fluorescence microscopy protein imagery. The proposed deep pipeline can better guide drug designing procedures in the pharmaceutical industry and open new avenues for researchers in computational biology and bioinformatics.