Masato Hagiwara

Masato Mita, Keisuke Sakaguchi, Masato Hagiwara et al.

Natural language processing technology has rapidly improved automated grammatical error correction tasks, and the community begins to explore document-level revision as one of the next challenges. To go beyond sentence-level automated grammatical error correction to NLP-based document-level revision assistant, there are two major obstacles: (1) there are few public corpora with document-level revisions being annotated by professional editors, and (2) it is not feasible to elicit all possible references and evaluate the quality of revision with such references because there are infinite possibilities of revision. This paper tackles these challenges. First, we introduce a new document-revision corpus, TETRA, where professional editors revised academic papers sampled from the ACL anthology which contain few trivial grammatical errors that enable us to focus more on document- and paragraph-level edits such as coherence and consistency. Second, we explore reference-less and interpretable methods for meta-evaluation that can detect quality improvements by document revision. We show the uniqueness of TETRA compared with existing document revision corpora and demonstrate that a fine-tuned pre-trained language model can discriminate the quality of documents after revision even when the difference is subtle. This promising result will encourage the community to further explore automated document revision models and metrics in future.

Jiacheng Shen, Masato Hagiwara, Milad Alizadeh et al.

Large language models have shown strong performance on broad-domain knowledge and reasoning benchmarks, but it remains unclear how well language models handle specialized animal-related knowledge under a unified closed-book evaluation protocol. We introduce BAGEL, a benchmark for evaluating animal knowledge expertise in language models. BAGEL is constructed from diverse scientific and reference sources, including bioRxiv, Global Biotic Interactions, Xeno-canto, and Wikipedia, using a combination of curated examples and automatically generated closed-book question-answer pairs. The benchmark covers multiple aspects of animal knowledge, including taxonomy, morphology, habitat, behavior, vocalization, geographic distribution, and species interactions. By focusing on closed-book evaluation, BAGEL measures animal-related knowledge of models without external retrieval at inference time. BAGEL further supports fine-grained analysis across source domains, taxonomic groups, and knowledge categories, enabling a more precise characterization of model strengths and systematic failure modes. Our benchmark provides a new testbed for studying domain-specific knowledge generalization in language models and for improving their reliability in biodiversity-related applications.

David Robinson, Marius Miron, Masato Hagiwara et al.

Large language models (LLMs) prompted with text and audio have achieved state-of-the-art performance across various auditory tasks, including speech, music, and general audio, showing emergent abilities on unseen tasks. However, their potential has yet to be fully demonstrated in bioacoustics tasks, such as detecting animal vocalizations in large recordings, classifying rare and endangered species, and labeling context and behavior -- tasks that are crucial for conservation, biodiversity monitoring, and animal behavior studies. In this work, we present NatureLM-audio, the first audio-language foundation model specifically designed for bioacoustics. Our training dataset consists of carefully curated text-audio pairs spanning bioacoustics, speech, and music, designed to address the field's limited availability of annotated data. We demonstrate successful transfer of learned representations from music and speech to bioacoustics, and our model shows promising generalization to unseen taxa and tasks. We evaluate NatureLM-audio on a novel benchmark (BEANS-Zero) and it sets a new state of the art on several bioacoustics tasks, including zero-shot classification of unseen species. To advance bioacoustics research, we release our model weights, benchmark data, and open-source the code for training and benchmark data generation and model training.

Marius Miron, David Robinson, Masato Hagiwara et al.

Probing heads map the representations learned from audio by a machine learning model to downstream task labels and are a key component in evaluating representation learning. Most bioacoustic benchmarks use a fixed, low-capacity probe, such as a linear layer on the final encoder layer. While this standardization enables model comparisons, it may bias results by overlooking the interaction between encoder features and probe design. In this work, we systematically study different probing strategies across two bioacoustic benchmarks, BEANs and BirdSet. We evaluate last- and multi-layer probing, across linear and attention probes. We show that larger probe heads that leverage time information have superior performance. Our results suggest that current benchmarks may misrepresent encoder quality when relying on a last-layer probing setup. Multi-layer probing improves downstream task performance across all tested models, while attention probing has superior performance to linear probing for transformer models.

Hitoshi Manabe, Masato Hagiwara

Automated text scoring (ATS) tasks, such as automated essay scoring and readability assessment, are important educational applications of natural language processing. Due to their interpretability of models and predictions, traditional machine learning (ML) algorithms based on handcrafted features are still in wide use for ATS tasks. Practitioners often need to experiment with a variety of models (including deep and traditional ML ones), features, and training objectives (regression and classification), although modern deep learning frameworks such as PyTorch require deep ML expertise to fully utilize. In this paper, we present EXPATS, an open-source framework to allow its users to develop and experiment with different ATS models quickly by offering flexible components, an easy-to-use configuration system, and the command-line interface. The toolkit also provides seamless integration with the Language Interpretability Tool (LIT) so that one can interpret and visualize models and their predictions. We also describe two case studies where we build ATS models quickly with minimal engineering efforts. The toolkit is available at \url{https://github.com/octanove/expats}.

Masato Hagiwara, Joshua Tanner, Keisuke Sakaguchi

We present GrammarTagger, an open-source grammar profiler which, given an input text, identifies grammatical features useful for language education. The model architecture enables it to learn from a small amount of texts annotated with spans and their labels, which 1) enables easier and more intuitive annotation, 2) supports overlapping spans, and 3) is less prone to error propagation, compared to complex hand-crafted rules defined on constituency/dependency parses. We show that we can bootstrap a grammar profiler model with $F_1 \approx 0.6$ from only a couple hundred sentences both in English and Chinese, which can be further boosted via learning a multilingual model. With GrammarTagger, we also build Octanove Learn, a search engine of language learning materials indexed by their reading difficulty and grammatical features. The code and pretrained models are publicly available at \url{https://github.com/octanove/grammartagger}.

Masato Hagiwara, Takumi Ito, Tatsuki Kuribayashi et al.

Language technologies play a key role in assisting people with their writing. Although there has been steady progress in e.g., grammatical error correction (GEC), human writers are yet to benefit from this progress due to the high development cost of integrating with writing software. We propose TEASPN, a protocol and an open-source framework for achieving integrated writing assistance environments. The protocol standardizes the way writing software communicates with servers that implement such technologies, allowing developers and researchers to integrate the latest developments in natural language processing (NLP) with low cost. As a result, users can enjoy the integrated experience in their favorite writing software. The results from experiments with human participants show that users use a wide range of technologies and rate their writing experience favorably, allowing them to write more fluent text.

Masato Hagiwara, Marius Miron, Jen-Yu Liu

Traditionally, bioacoustics has relied on spectrograms and continuous, per-frame audio representations for the analysis of animal sounds, also serving as input to machine learning models. Meanwhile, the International Phonetic Alphabet (IPA) system has provided an interpretable, language-independent method for transcribing human speech sounds. In this paper, we introduce ISPA (Inter-Species Phonetic Alphabet), a precise, concise, and interpretable system designed for transcribing animal sounds into text. We compare acoustics-based and feature-based methods for transcribing and classifying animal sounds, demonstrating their comparable performance with baseline methods utilizing continuous, dense audio representations. By representing animal sounds with text, we effectively treat them as a "foreign language," and we show that established human language ML paradigms and models, such as language models, can be successfully applied to improve performance.

Louis Mahon, Benjamin Hoffman, Logan James et al.

We propose a method for accurately detecting bioacoustic sound events that is robust to overlapping events, a common issue in domains such as ethology, ecology and conservation. While standard methods employ a frame-based, multi-label approach, we introduce an onset-based detection method which we name Voxaboxen. It takes inspiration from object detection methods in computer vision, but simultaneously takes advantage of recent advances in self-supervised audio encoders. For each time window, Voxaboxen predicts whether it contains the start of a vocalization and how long the vocalization is. It also does the same in reverse, predicting whether each window contains the end of a vocalization, and how long ago it started. The two resulting sets of bounding boxes are then fused using a graph-matching algorithm. We also release a new dataset designed to measure performance on detecting overlapping vocalizations. This consists of recordings of zebra finches annotated with temporally-strong labels and showing frequent overlaps. We test Voxaboxen on seven existing data sets and on our new data set. We compare Voxaboxen to natural baselines and existing sound event detection methods and demonstrate SotA results. Further experiments show that improvements are robust to frequent vocalization overlap.

Benjamin Hoffman, David Robinson, Marius Miron et al.

We propose a methodology for training foundation models that enhances their in-context learning capabilities within the domain of bioacoustic signal processing. We use synthetically generated training data, introducing a domain-randomization-based pipeline that constructs diverse acoustic scenes with temporally strong labels. We generate over 8.8 thousand hours of strongly-labeled audio and train a query-by-example, transformer-based model to perform few-shot bioacoustic sound event detection. Our second contribution is a public benchmark of 13 diverse few-shot bioacoustics tasks. Our model outperforms previously published methods, and improves relative to other training-free methods by $64\%$. We demonstrate that this is due to increase in model size and data scale, as well as algorithmic improvements. We make our trained model available via an API, to provide ecologists and ethologists with a training-free tool for bioacoustic sound event detection.

Jules Cauzinille, Marius Miron, Olivier Pietquin et al.

Self-supervised speech models have demonstrated impressive performance in speech processing, but their effectiveness on non-speech data remains underexplored. We study the transfer learning capabilities of such models on bioacoustic detection and classification tasks. We show that models such as HuBERT, WavLM, and XEUS can generate rich latent representations of animal sounds across taxa. We analyze the models properties with linear probing on time-averaged representations. We then extend the approach to account for the effect of time-wise information with other downstream architectures. Finally, we study the implication of frequency range and noise on performance. Notably, our results are competitive with fine-tuned bioacoustic pre-trained models and show the impact of noise-robust pre-training setups. These findings highlight the potential of speech-based self-supervised learning as an efficient framework for advancing bioacoustic research.

Marius Miron, David Robinson, Milad Alizadeh et al.

Bioacoustics, the study of sounds produced by living organisms, plays a vital role in conservation, biodiversity monitoring, and behavioral studies. Many tasks in this field, such as species, individual, and behavior classification and detection, are well-suited to machine learning. However, they often suffer from limited annotated data, highlighting the need for a general-purpose bioacoustic encoder capable of extracting useful representations for diverse downstream tasks. Such encoders have been proposed before, but are often limited in scope due to a focus on a narrow range of species (typically birds), and a reliance on a single model architecture or training paradigm. Moreover, they are usually evaluated on a small set of tasks and datasets. In this work, we present a large-scale empirical study that covers aspects of bioacoustics that are relevant to research but have previously been scarcely considered: training data diversity and scale, model architectures and training recipes, and the breadth of evaluation tasks and datasets. We obtain encoders that are state-of-the-art on the existing and proposed benchmarks. We also identify what matters for training these encoders, such that this work can be extended when more data are available or better architectures are proposed. Specifically, across 26 datasets with tasks including species classification, detection, individual ID, and vocal repertoire discovery, we find self-supervised pre-training followed by supervised post-training on a mixed bioacoustics + general-audio corpus yields the strongest in- and out-of-distribution performance. We show the importance of data diversity in both stages. To support ongoing research and application, we will release the model checkpoints.

Masato Hagiwara, Joshua Tanner

Second language acquisition (SLA) is a complex and dynamic process. Many SLA studies that have attempted to record and analyze this process have typically focused on a single modality (e.g., textual output of learners), covered only a short period of time, and/or lacked control (e.g., failed to capture every aspect of the learning process). In Project MOSLA (Moments of Second Language Acquisition), we have created a longitudinal, multimodal, multilingual, and controlled dataset by inviting participants to learn one of three target languages (Arabic, Spanish, and Chinese) from scratch over a span of two years, exclusively through online instruction, and recording every lesson using Zoom. The dataset is semi-automatically annotated with speaker/language IDs and transcripts by both human annotators and fine-tuned state-of-the-art speech models. Our experiments reveal linguistic insights into learners' proficiency development over time, as well as the potential for automatically detecting the areas of focus on the screen purely from the unannotated multimodal data. Our dataset is freely available for research purposes and can serve as a valuable resource for a wide range of applications, including but not limited to SLA, proficiency assessment, language and speech processing, pedagogy, and multimodal learning analytics.

Yoshinari Fujinuma, Masato Hagiwara

Readability or difficulty estimation of words and documents has been investigated independently in the literature, often assuming the existence of extensive annotated resources for the other. Motivated by our analysis showing that there is a recursive relationship between word and document difficulty, we propose to jointly estimate word and document difficulty through a graph convolutional network (GCN) in a semi-supervised fashion. Our experimental results reveal that the GCN-based method can achieve higher accuracy than strong baselines, and stays robust even with a smaller amount of labeled data.

Masato Hagiwara, Masato Mita

The lack of large-scale datasets has been a major hindrance to the development of NLP tasks such as spelling correction and grammatical error correction (GEC). As a complementary new resource for these tasks, we present the GitHub Typo Corpus, a large-scale, multilingual dataset of misspellings and grammatical errors along with their corrections harvested from GitHub, a large and popular platform for hosting and sharing git repositories. The dataset, which we have made publicly available, contains more than 350k edits and 65M characters in more than 15 languages, making it the largest dataset of misspellings to date. We also describe our process for filtering true typo edits based on learned classifiers on a small annotated subset, and demonstrate that typo edits can be identified with F1 ~ 0.9 using a very simple classifier with only three features. The detailed analyses of the dataset show that existing spelling correctors merely achieve an F-measure of approx. 0.5, suggesting that the dataset serves as a new, rich source of spelling errors that complement existing datasets.

Takumi Ito, Tatsuki Kuribayashi, Hayato Kobayashi et al.

The writing process consists of several stages such as drafting, revising, editing, and proofreading. Studies on writing assistance, such as grammatical error correction (GEC), have mainly focused on sentence editing and proofreading, where surface-level issues such as typographical, spelling, or grammatical errors should be corrected. We broaden this focus to include the earlier revising stage, where sentences require adjustment to the information included or major rewriting and propose Sentence-level Revision (SentRev) as a new writing assistance task. Well-performing systems in this task can help inexperienced authors by producing fluent, complete sentences given their rough, incomplete drafts. We build a new freely available crowdsourced evaluation dataset consisting of incomplete sentences authored by non-native writers paired with their final versions extracted from published academic papers for developing and evaluating SentRev models. We also establish baseline performance on SentRev using our newly built evaluation dataset.