Tingyou Li

Tingyou Li, Zixin Xu, Yong S. Chu et al.

Fourier phase retrieval is essential for high-definition imaging of nanoscale structures across diverse fields, notably coherent diffraction imaging. This study presents the Single impliCit neurAl Network (SCAN), a tool built upon coordinate neural networks meticulously designed for enhanced phase retrieval performance. Remedying the drawbacks of conventional iterative methods which are easiliy trapped into local minimum solutions and sensitive to noise, SCAN adeptly connects object coordinates to their amplitude and phase within a unified network in an unsupervised manner. While many existing methods primarily use Fourier magnitude in their loss function, our approach incorporates both the predicted magnitude and phase, enhancing retrieval accuracy. Comprehensive tests validate SCAN's superiority over traditional and other deep learning models regarding accuracy and noise robustness. We also demonstrate that SCAN excels in the ptychography setting.

Collin Sakal, Tingyou Li, Juan Li et al.

Timely implementation of interventions to slow cognitive decline among older adults requires accurate monitoring to detect changes in cognitive function. Data gathered using wearable devices that can continuously monitor factors known to be associated with cognition could be used to train machine learning models and develop wearable-based cognitive monitoring systems. Using data from over 2,400 older adults in the National Health and Nutrition Examination Survey (NHANES) we developed prediction models to differentiate older adults with normal cognition from those with poor cognition based on outcomes from three cognitive tests measuring different domains of cognitive function. During repeated cross-validation, CatBoost, XGBoost, and Random Forest models performed best when predicting cognition based on processing speed, working memory, and attention (median AUCs >0.82) compared to immediate and delayed recall (median AUCs >0.72) and categorical verbal fluency (median AUC >0.68). Activity and sleep parameters were also more strongly associated with processing speed, working memory, and attention compared to other cognitive subdomains. Our work provides proof of concept that wearable-based cognitive monitoring systems may be a viable alternative to traditional methods for monitoring processing speeds, working memory, and attention. We further identified novel metrics that could be targets in future causal studies seeking to better understand how sleep and activity parameters influence cognitive function among older adults.

Tingyou Li, Zixin Xu, Zirui Gao et al.

X-ray ptychography provides exceptional nanoscale resolution and is widely applied in materials science, biology, and nanotechnology. However, its full potential is constrained by the critical challenge of accurately reconstructing images when the illuminating probe is unknown. Conventional iterative methods and deep learning approaches are often suboptimal, particularly under the low-signal conditions inherent to low-dose and high-speed experiments. These limitations compromise reconstruction fidelity and restrict the broader adoption of the technique. In this work, we introduce the Ptychographic Implicit Neural Representation (PtyINR), a self-supervised framework that simultaneously addresses the object and probe recovery problem. By parameterizing both as continuous neural representations, PtyINR performs end-to-end reconstruction directly from raw diffraction patterns without requiring any pre-characterization of the probe. Extensive evaluations demonstrate that PtyINR achieves superior reconstruction quality on both simulated and experimental data, with remarkable robustness under challenging low-signal conditions. Furthermore, PtyINR offers a generalizable, physics-informed framework for addressing probe-dependent inverse problems, making it applicable to a wide range of computational microscopy problems.