Nicholas R. Rasmussen

Nicholas R. Rasmussen, Rodrigue Rizk, Longwei Wang et al.

The early detection of Parkinsons disease remains a critical challenge in clinical neuroscience, with electroencephalography offering a noninvasive and scalable pathway toward population level screening. While machine learning has shown promise in this domain, many reported results suffer from methodological flaws, most notably patient level data leakage, inflating performance estimates and limiting clinical translation. To address these modeling pitfalls, we propose a unified evaluation framework grounded in nested cross validation and incorporating three complementary safeguards: (i) patient level stratification to eliminate subject overlap and ensure unbiased generalization, (ii) multi layered windowing to harmonize heterogeneous EEG recordings while preserving temporal dynamics, and (iii) inner loop channel selection to enable principled feature reduction without information leakage. Applied across three independent datasets with a heterogeneous number of channels, a convolutional neural network trained under this framework achieved 80.6% accuracy and demonstrated state of the art performance under held out population block testing, comparable to other methods in the literature. This performance underscores the necessity of nested cross validation as a safeguard against bias and as a principled means of selecting the most relevant information for patient level decisions, providing a reproducible foundation that can extend to other biomedical signal analysis domains.

Nicholas R. Rasmussen, Longwei Wang, Rodrigue Rizk et al.

Developing robust and clinically reliable EEG biomarkers requires evaluation frameworks that explicitly address cross population generalization in multi site settings such as Parkinsons disease (PD) detection. Models trained under i.i.d. assumptions often capture population specific artifacts rather than disease relevant neural structure, leading to poor generalization across clinical cohorts. EEG further amplifies this challenge due to low signal to noise ratio and heterogeneous acquisition conditions. We propose a population aware evaluation framework to assess the robustness and clinical reliability of EEG biomarkers under distribution shift. Using an n gram expansion strategy, we enumerate all cross population train test configurations across five independent cohorts, resulting in 75 directional evaluations. A nested cross validation design with integrated channel selection ensures prospective biomarker identification without population leakage. Results show that cross population transfer is asymmetric and that both accuracy and biomarker stability improve with increasing training population diversity, achieving up to 94.1% accuracy on held out cohorts. A theoretical analysis based on mixture risk optimization and hypothesis space contraction explains these trends, showing that multi population training promotes population robust representations. This work establishes a principled framework for learning robust, generalizable, and clinically reliable EEG biomarkers for multi site biomedical applications.

Nicholas R. Rasmussen, Rodrigue Rizk, Longwei Wang et al.

Underwater Passive Acoustic Monitoring (UPAM) provides rich spatiotemporal data for long-term ecological analysis, but intrinsic noise and complex signal dependencies hinder model stability and generalization. Multilayered windowing has improved target sound localization, yet variability from shifting ambient noise, diverse propagation effects, and mixed biological and anthropogenic sources demands robust architectures and rigorous evaluation. We introduce GetNetUPAM, a hierarchical nested cross-validation framework designed to quantify model stability under ecologically realistic variability. Data are partitioned into distinct site-year segments, preserving recording heterogeneity and ensuring each validation fold reflects a unique environmental subset, reducing overfitting to localized noise and sensor artifacts. Site-year blocking enforces evaluation against genuine environmental diversity, while standard cross-validation on random subsets measures generalization across UPAM's full signal distribution, a dimension absent from current benchmarks. Using GetNetUPAM as the evaluation backbone, we propose the Adaptive Resolution Pooling and Attention Network (ARPA-N), a neural architecture for irregular spectrogram dimensions. Adaptive pooling with spatial attention extends the receptive field, capturing global context without excessive parameters. Under GetNetUPAM, ARPA-N achieves a 14.4% gain in average precision over DenseNet baselines and a log2-scale order-of-magnitude drop in variability across all metrics, enabling consistent detection across site-year folds and advancing scalable, accurate bioacoustic monitoring.