Plumber: A Modular Framework to Create Information Extraction PipelinesMohamad Yaser Jaradeh, Kuldeep Singh, Markus Stocker et al.
Information Extraction (IE) tasks are commonly studied topics in various domains of research. Hence, the community continuously produces multiple techniques, solutions, and tools to perform such tasks. However, running those tools and integrating them within existing infrastructure requires time, expertise, and resources. One pertinent task here is triples extraction and linking, where structured triples are extracted from a text and aligned to an existing Knowledge Graph (KG). In this paper, we present PLUMBER, the first framework that allows users to manually and automatically create suitable IE pipelines from a community-created pool of tools to perform triple extraction and alignment on unstructured text. Our approach provides an interactive medium to alter the pipelines and perform IE tasks. A short video to show the working of the framework for different use-cases is available online under: https://www.youtube.com/watch?v=XC9rJNIUv8g
Knowledge-Driven Cross-Document Relation ExtractionMonika Jain, Raghava Mutharaju, Kuldeep Singh et al.
Relation extraction (RE) is a well-known NLP application often treated as a sentence- or document-level task. However, a handful of recent efforts explore it across documents or in the cross-document setting (CrossDocRE). This is distinct from the single document case because different documents often focus on disparate themes, while text within a document tends to have a single goal. Linking findings from disparate documents to identify new relationships is at the core of the popular literature-based knowledge discovery paradigm in biomedicine and other domains. Current CrossDocRE efforts do not consider domain knowledge, which are often assumed to be known to the reader when documents are authored. Here, we propose a novel approach, KXDocRE, that embed domain knowledge of entities with input text for cross-document RE. Our proposed framework has three main benefits over baselines: 1) it incorporates domain knowledge of entities along with documents' text; 2) it offers interpretability by producing explanatory text for predicted relations between entities 3) it improves performance over the prior methods.
ReOnto: A Neuro-Symbolic Approach for Biomedical Relation ExtractionMonika Jain, Kuldeep Singh, Raghava Mutharaju
Relation Extraction (RE) is the task of extracting semantic relationships between entities in a sentence and aligning them to relations defined in a vocabulary, which is generally in the form of a Knowledge Graph (KG) or an ontology. Various approaches have been proposed so far to address this task. However, applying these techniques to biomedical text often yields unsatisfactory results because it is hard to infer relations directly from sentences due to the nature of the biomedical relations. To address these issues, we present a novel technique called ReOnto, that makes use of neuro symbolic knowledge for the RE task. ReOnto employs a graph neural network to acquire the sentence representation and leverages publicly accessible ontologies as prior knowledge to identify the sentential relation between two entities. The approach involves extracting the relation path between the two entities from the ontology. We evaluate the effect of using symbolic knowledge from ontologies with graph neural networks. Experimental results on two public biomedical datasets, BioRel and ADE, show that our method outperforms all the baselines (approximately by 3\%).
1.4CLNov 23, 2021
Triple Classification for Scholarly Knowledge Graph CompletionMohamad Yaser Jaradeh, Kuldeep Singh, Markus Stocker et al.
Scholarly Knowledge Graphs (KGs) provide a rich source of structured information representing knowledge encoded in scientific publications. With the sheer volume of published scientific literature comprising a plethora of inhomogeneous entities and relations to describe scientific concepts, these KGs are inherently incomplete. We present exBERT, a method for leveraging pre-trained transformer language models to perform scholarly knowledge graph completion. We model triples of a knowledge graph as text and perform triple classification (i.e., belongs to KG or not). The evaluation shows that exBERT outperforms other baselines on three scholarly KG completion datasets in the tasks of triple classification, link prediction, and relation prediction. Furthermore, we present two scholarly datasets as resources for the research community, collected from public KGs and online resources.
10.4IRAug 12, 2021
HopfE: Knowledge Graph Representation Learning using Inverse Hopf FibrationsAnson Bastos, Kuldeep Singh, Abhishek Nadgeri et al.
Recently, several Knowledge Graph Embedding (KGE) approaches have been devised to represent entities and relations in dense vector space and employed in downstream tasks such as link prediction. A few KGE techniques address interpretability, i.e., mapping the connectivity patterns of the relations (i.e., symmetric/asymmetric, inverse, and composition) to a geometric interpretation such as rotations. Other approaches model the representations in higher dimensional space such as four-dimensional space (4D) to enhance the ability to infer the connectivity patterns (i.e., expressiveness). However, modeling relation and entity in a 4D space often comes at the cost of interpretability. This paper proposes HopfE, a novel KGE approach aiming to achieve the interpretability of inferred relations in the four-dimensional space. We first model the structural embeddings in 3D Euclidean space and view the relation operator as an SO(3) rotation. Next, we map the entity embedding vector from a 3D space to a 4D hypersphere using the inverse Hopf Fibration, in which we embed the semantic information from the KG ontology. Thus, HopfE considers the structural and semantic properties of the entities without losing expressivity and interpretability. Our empirical results on four well-known benchmarks achieve state-of-the-art performance for the KG completion task.
VOGUE: Answer Verbalization through Multi-Task LearningEndri Kacupaj, Shyamnath Premnadh, Kuldeep Singh et al.
In recent years, there have been significant developments in Question Answering over Knowledge Graphs (KGQA). Despite all the notable advancements, current KGQA systems only focus on answer generation techniques and not on answer verbalization. However, in real-world scenarios (e.g., voice assistants such as Alexa, Siri, etc.), users prefer verbalized answers instead of a generated response. This paper addresses the task of answer verbalization for (complex) question answering over knowledge graphs. In this context, we propose a multi-task-based answer verbalization framework: VOGUE (Verbalization thrOuGh mUlti-task lEarning). The VOGUE framework attempts to generate a verbalized answer using a hybrid approach through a multi-task learning paradigm. Our framework can generate results based on using questions and queries as inputs concurrently. VOGUE comprises four modules that are trained simultaneously through multi-task learning. We evaluate our framework on existing datasets for answer verbalization, and it outperforms all current baselines on both BLEU and METEOR scores.
31.0CLOct 16, 2020
QA2Explanation: Generating and Evaluating Explanations for Question Answering Systems over Knowledge GraphSaeedeh Shekarpour, Abhishek Nadgeri, Kuldeep Singh
In the era of Big Knowledge Graphs, Question Answering (QA) systems have reached a milestone in their performance and feasibility. However, their applicability, particularly in specific domains such as the biomedical domain, has not gained wide acceptance due to their "black box" nature, which hinders transparency, fairness, and accountability of QA systems. Therefore, users are unable to understand how and why particular questions have been answered, whereas some others fail. To address this challenge, in this paper, we develop an automatic approach for generating explanations during various stages of a pipeline-based QA system. Our approach is a supervised and automatic approach which considers three classes (i.e., success, no answer, and wrong answer) for annotating the output of involved QA components. Upon our prediction, a template explanation is chosen and integrated into the output of the corresponding component. To measure the effectiveness of the approach, we conducted a user survey as to how non-expert users perceive our generated explanations. The results of our study show a significant increase in the four dimensions of the human factor from the Human-computer interaction community.
13.9IRJul 14, 2020
Template-Based Question Answering over Linked Geospatial DataDharmen Punjani, Markos Iliakis, Theodoros Stefou et al.
Large amounts of geospatial data have been made available recently on the linked open data cloud and the portals of many national cartographic agencies (e.g., OpenStreetMap data, administrative geographies of various countries, or land cover/land use data sets). These datasets use various geospatial vocabularies and can be queried using SPARQL or its OGC-standardized extension GeoSPARQL. In this paper, we go beyond these approaches to offer a question-answering engine for natural language questions on top of linked geospatial data sources. Our system has been implemented as re-usable components of the Frankenstein question answering architecture. We give a detailed description of the system's architecture, its underlying algorithms, and its evaluation using a set of 201 natural language questions. The set of questions is offered to the research community as a gold standard dataset for the comparative evaluation of future geospatial question answering engines.
Falcon 2.0: An Entity and Relation Linking Tool over WikidataAhmad Sakor, Kuldeep Singh, Anery Patel et al.
The Natural Language Processing (NLP) community has significantly contributed to the solutions for entity and relation recognition from the text, and possibly linking them to proper matches in Knowledge Graphs (KGs). Considering Wikidata as the background KG, still, there are limited tools to link knowledge within the text to Wikidata. In this paper, we present Falcon 2.0, first joint entity, and relation linking tool over Wikidata. It receives a short natural language text in the English language and outputs a ranked list of entities and relations annotated with the proper candidates in Wikidata. The candidates are represented by their Internationalized Resource Identifier (IRI) in Wikidata. Falcon 2.0 resorts to the English language model for the recognition task (e.g., N-Gram tiling and N-Gram splitting), and then an optimization approach for linking task. We have empirically studied the performance of Falcon 2.0 on Wikidata and concluded that it outperforms all the existing baselines. Falcon 2.0 is public and can be reused by the community; all the required instructions of Falcon 2.0 are well-documented at our GitHub repository. We also demonstrate an online API, which can be run without any technical expertise. Falcon 2.0 and its background knowledge bases are available as resources at https://labs.tib.eu/falcon/falcon2/.
1.6CLDec 12, 2019
Encoding Knowledge Graph Entity Aliases in Attentive Neural Network for Wikidata Entity LinkingIsaiah Onando Mulang, Kuldeep Singh, Akhilesh Vyas et al.
The collaborative knowledge graphs such as Wikidata excessively rely on the crowd to author the information. Since the crowd is not bound to a standard protocol for assigning entity titles, the knowledge graph is populated by non-standard, noisy, long or even sometimes awkward titles. The issue of long, implicit, and nonstandard entity representations is a challenge in Entity Linking (EL) approaches for gaining high precision and recall. Underlying KG, in general, is the source of target entities for EL approaches, however, it often contains other relevant information, such as aliases of entities (e.g., Obama and Barack Hussein Obama are aliases for the entity Barack Obama). EL models usually ignore such readily available entity attributes. In this paper, we examine the role of knowledge graph context on an attentive neural network approach for entity linking on Wikidata. Our approach contributes by exploiting the sufficient context from a KG as a source of background knowledge, which is then fed into the neural network. This approach demonstrates merit to address challenges associated with entity titles (multi-word, long, implicit, case-sensitive). Our experimental study shows approx 8% improvements over the baseline approach, and significantly outperform an end to end approach for Wikidata entity linking.
0.2CLAug 14, 2019
Towards Optimisation of Collaborative Question Answering over Knowledge GraphsKuldeep Singh, Mohamad Yaser Jaradeh, Saeedeh Shekarpour et al.
Collaborative Question Answering (CQA) frameworks for knowledge graphs aim at integrating existing question answering (QA) components for implementing sequences of QA tasks (i.e. QA pipelines). The research community has paid substantial attention to CQAs since they support reusability and scalability of the available components in addition to the flexibility of pipelines. CQA frameworks attempt to build such pipelines automatically by solving two optimisation problems: 1) local collective performance of QA components per QA task and 2) global performance of QA pipelines. In spite offering several advantages over monolithic QA systems, the effectiveness and efficiency of CQA frameworks in answering questions is limited. In this paper, we tackle the problem of local optimisation of CQA frameworks and propose a three fold approach, which applies feature selection techniques with supervised machine learning approaches in order to identify the best performing components efficiently. We have empirically evaluated our approach over existing benchmarks and compared to existing automatic CQA frameworks. The observed results provide evidence that our approach answers a higher number of questions than the state of the art while reducing: i) the number of used features by 50% and ii) the number of components used by 76%.
13.8IRJan 14, 2016
Question Answering on Linked Data: Challenges and Future DirectionsSaeedeh Shekarpour, Denis Lukovnikov, Ashwini Jaya Kumar et al.
Question Answering (QA) systems are becoming the inspiring model for the future of search engines. While recently, underlying datasets for QA systems have been promoted from unstructured datasets to structured datasets with highly semantic-enriched metadata, but still question answering systems involve serious challenges which cause to be far beyond desired expectations. In this paper, we raise the challenges for building a Question Answering (QA) system especially with the focus of employing structured data (i.e. knowledge graph). This paper provide an exhaustive insight of the known challenges, so far. Thus, it helps researchers to easily spot open rooms for the future research agenda.