Matthew Yang

Vivek Anand, Matthew Yang, Zhanzhan Zhao

Recommender systems, which offer personalized suggestions to users, power many of today's social media, e-commerce and entertainment. However, these systems have been known to intellectually isolate users from a variety of perspectives, or cause filter bubbles. In our work, we characterize and mitigate this filter bubble effect. We do so by classifying various datapoints based on their user-item interaction history and calculating the influences of the classified categories on each other using the well known TracIn method. Finally, we mitigate this filter bubble effect without compromising accuracy by carefully retraining our recommender system.

Fuyi Yang, Chenchen Ye, Mingyu Derek Ma et al.

Hypothesis generation in biomedical research has traditionally centered on uncovering hidden relationships within vast scientific literature, often using methods like Literature-Based Discovery (LBD). Despite progress, current approaches typically depend on single data types or predefined extraction patterns, which restricts the discovery of novel and complex connections. Recent advances in Large Language Model (LLM) agents show significant potential, with capabilities in information retrieval, reasoning, and generation. However, their application to biomedical hypothesis generation has been limited by the absence of standardized datasets and execution environments. To address this, we introduce BioVerge, a comprehensive benchmark, and BioVerge Agent, an LLM-based agent framework, to create a standardized environment for exploring biomedical hypothesis generation at the frontier of existing scientific knowledge. Our dataset includes structured and textual data derived from historical biomedical hypotheses and PubMed literature, organized to support exploration by LLM agents. BioVerge Agent utilizes a ReAct-based approach with distinct Generation and Evaluation modules that iteratively produce and self-assess hypothesis proposals. Through extensive experimentation, we uncover key insights: 1) different architectures of BioVerge Agent influence exploration diversity and reasoning strategies; 2) structured and textual information sources each provide unique, critical contexts that enhance hypothesis generation; and 3) self-evaluation significantly improves the novelty and relevance of proposed hypotheses.

Xiaofeng Lin, Chenheng Xu, Matthew Yang et al.

Generative Foundation Models (GFMs) have achieved remarkable success in producing high-quality synthetic data for images and text. However, their application to tabular data presents significant challenges due to the heterogeneous nature of table features. Current cross-table learning frameworks struggle because they lack a generative model backbone and an effective mechanism to decode heterogeneous feature values. To address these challenges, we propose the Cross-Table Synthesizer (CTSyn), a diffusion-based generative foundation model for tabular data generation. CTSyn comprises two key components. The first is an autoencoder network that consolidates diverse tables into a unified latent space. It dynamically reconstructs table values using a table schema embedding, allowing adaptation to heterogeneous datasets. The second is a conditional latent diffusion model that generates samples from the learned latent space, conditioned on the table schema. Through large-scale pre-training, CTSyn outperforms existing table synthesizers on standard benchmarks in both utility and diversity. These results position CTSyn as a promising framework for synthetic table generation and lay the groundwork for developing large-scale tabular foundation models.