CVAug 3, 2022
Counterfactual Image Synthesis for Discovery of Personalized Predictive Image MarkersAmar Kumar, Anjun Hu, Brennan Nichyporuk et al.
The discovery of patient-specific imaging markers that are predictive of future disease outcomes can help us better understand individual-level heterogeneity of disease evolution. In fact, deep learning models that can provide data-driven personalized markers are much more likely to be adopted in medical practice. In this work, we demonstrate that data-driven biomarker discovery can be achieved through a counterfactual synthesis process. We show how a deep conditional generative model can be used to perturb local imaging features in baseline images that are pertinent to subject-specific future disease evolution and result in a counterfactual image that is expected to have a different future outcome. Candidate biomarkers, therefore, result from examining the set of features that are perturbed in this process. Through several experiments on a large-scale, multi-scanner, multi-center multiple sclerosis (MS) clinical trial magnetic resonance imaging (MRI) dataset of relapsing-remitting (RRMS) patients, we demonstrate that our model produces counterfactuals with changes in imaging features that reflect established clinical markers predictive of future MRI lesional activity at the population level. Additional qualitative results illustrate that our model has the potential to discover novel and subject-specific predictive markers of future activity.
CVOct 26, 2023
A Survey on Transferability of Adversarial Examples across Deep Neural NetworksJindong Gu, Xiaojun Jia, Pau de Jorge et al.
The emergence of Deep Neural Networks (DNNs) has revolutionized various domains by enabling the resolution of complex tasks spanning image recognition, natural language processing, and scientific problem-solving. However, this progress has also brought to light a concerning vulnerability: adversarial examples. These crafted inputs, imperceptible to humans, can manipulate machine learning models into making erroneous predictions, raising concerns for safety-critical applications. An intriguing property of this phenomenon is the transferability of adversarial examples, where perturbations crafted for one model can deceive another, often with a different architecture. This intriguing property enables black-box attacks which circumvents the need for detailed knowledge of the target model. This survey explores the landscape of the adversarial transferability of adversarial examples. We categorize existing methodologies to enhance adversarial transferability and discuss the fundamental principles guiding each approach. While the predominant body of research primarily concentrates on image classification, we also extend our discussion to encompass other vision tasks and beyond. Challenges and opportunities are discussed, highlighting the importance of fortifying DNNs against adversarial vulnerabilities in an evolving landscape.
CVNov 15, 2022
Clinically Plausible Pathology-Anatomy Disentanglement in Patient Brain MRI with Structured Variational PriorsAnjun Hu, Jean-Pierre R. Falet, Brennan S. Nichyporuk et al.
We propose a hierarchically structured variational inference model for accurately disentangling observable evidence of disease (e.g. brain lesions or atrophy) from subject-specific anatomy in brain MRIs. With flexible, partially autoregressive priors, our model (1) addresses the subtle and fine-grained dependencies that typically exist between anatomical and pathological generating factors of an MRI to ensure the clinical validity of generated samples; (2) preserves and disentangles finer pathological details pertaining to a patient's disease state. Additionally, we experiment with an alternative training configuration where we provide supervision to a subset of latent units. It is shown that (1) a partially supervised latent space achieves a higher degree of disentanglement between evidence of disease and subject-specific anatomy; (2) when the prior is formulated with an autoregressive structure, knowledge from the supervision can propagate to the unsupervised latent units, resulting in more informative latent representations capable of modelling anatomy-pathology interdependencies.
ROAug 19, 2025Code
ROVER: Robust Loop Closure Verification with Trajectory Prior in Repetitive EnvironmentsJingwen Yu, Jiayi Yang, Anjun Hu et al.
Loop closure detection is important for simultaneous localization and mapping (SLAM), which associates current observations with historical keyframes, achieving drift correction and global relocalization. However, a falsely detected loop can be fatal, and this is especially difficult in repetitive environments where appearance-based features fail due to the high similarity. Therefore, verification of a loop closure is a critical step in avoiding false positive detections. Existing works in loop closure verification predominantly focus on learning invariant appearance features, neglecting the prior knowledge of the robot's spatial-temporal motion cue, i.e., trajectory. In this letter, we propose ROVER, a loop closure verification method that leverages the historical trajectory as a prior constraint to reject false loops in challenging repetitive environments. For each loop candidate, it is first used to estimate the robot trajectory with pose-graph optimization. This trajectory is then submitted to a scoring scheme that assesses its compliance with the trajectory without the loop, which we refer to as the trajectory prior, to determine if the loop candidate should be accepted. Benchmark comparisons and real-world experiments demonstrate the effectiveness of the proposed method. Furthermore, we integrate ROVER into state-of-the-art SLAM systems to verify its robustness and efficiency. Our source code and self-collected dataset are available at https://github.com/jarvisyjw/ROVER.
CVMar 19, 2024Code
As Firm As Their Foundations: Can open-sourced foundation models be used to create adversarial examples for downstream tasks?Anjun Hu, Jindong Gu, Francesco Pinto et al.
Foundation models pre-trained on web-scale vision-language data, such as CLIP, are widely used as cornerstones of powerful machine learning systems. While pre-training offers clear advantages for downstream learning, it also endows downstream models with shared adversarial vulnerabilities that can be easily identified through the open-sourced foundation model. In this work, we expose such vulnerabilities in CLIP's downstream models and show that foundation models can serve as a basis for attacking their downstream systems. In particular, we propose a simple yet effective adversarial attack strategy termed Patch Representation Misalignment (PRM). Solely based on open-sourced CLIP vision encoders, this method produces adversaries that simultaneously fool more than 20 downstream models spanning 4 common vision-language tasks (semantic segmentation, object detection, image captioning and visual question-answering). Our findings highlight the concerning safety risks introduced by the extensive usage of public foundational models in the development of downstream systems, calling for extra caution in these scenarios.
CVAug 26, 2025
Articulate3D: Zero-Shot Text-Driven 3D Object PosingOishi Deb, Anjun Hu, Ashkan Khakzar et al.
We propose a training-free method, Articulate3D, to pose a 3D asset through language control. Despite advances in vision and language models, this task remains surprisingly challenging. To achieve this goal, we decompose the problem into two steps. We modify a powerful image-generator to create target images conditioned on the input image and a text instruction. We then align the mesh to the target images through a multi-view pose optimisation step. In detail, we introduce a self-attention rewiring mechanism (RSActrl) that decouples the source structure from pose within an image generative model, allowing it to maintain a consistent structure across varying poses. We observed that differentiable rendering is an unreliable signal for articulation optimisation; instead, we use keypoints to establish correspondences between input and target images. The effectiveness of Articulate3D is demonstrated across a diverse range of 3D objects and free-form text prompts, successfully manipulating poses while maintaining the original identity of the mesh. Quantitative evaluations and a comparative user study, in which our method was preferred over 85\% of the time, confirm its superiority over existing approaches. Project page:https://odeb1.github.io/articulate3d_page_deb/