Sara Ghazanfari

Sara Ghazanfari, Siddharth Garg, Prashanth Krishnamurthy et al.

Similarity metrics have played a significant role in computer vision to capture the underlying semantics of images. In recent years, advanced similarity metrics, such as the Learned Perceptual Image Patch Similarity (LPIPS), have emerged. These metrics leverage deep features extracted from trained neural networks and have demonstrated a remarkable ability to closely align with human perception when evaluating relative image similarity. However, it is now well-known that neural networks are susceptible to adversarial examples, i.e., small perturbations invisible to humans crafted to deliberately mislead the model. Consequently, the LPIPS metric is also sensitive to such adversarial examples. This susceptibility introduces significant security concerns, especially considering the widespread adoption of LPIPS in large-scale applications. In this paper, we propose the Robust Learned Perceptual Image Patch Similarity (R-LPIPS) metric, a new metric that leverages adversarially trained deep features. Through a comprehensive set of experiments, we demonstrate the superiority of R-LPIPS compared to the classical LPIPS metric. The code is available at https://github.com/SaraGhazanfari/R-LPIPS.

Sara Ghazanfari, Alexandre Araujo, Prashanth Krishnamurthy et al.

Recent years have seen growing interest in developing and applying perceptual similarity metrics. Research has shown the superiority of perceptual metrics over pixel-wise metrics in aligning with human perception and serving as a proxy for the human visual system. On the other hand, as perceptual metrics rely on neural networks, there is a growing concern regarding their resilience, given the established vulnerability of neural networks to adversarial attacks. It is indeed logical to infer that perceptual metrics may inherit both the strengths and shortcomings of neural networks. In this work, we demonstrate the vulnerability of state-of-the-art perceptual similarity metrics based on an ensemble of ViT-based feature extractors to adversarial attacks. We then propose a framework to train a robust perceptual similarity metric called LipSim (Lipschitz Similarity Metric) with provable guarantees. By leveraging 1-Lipschitz neural networks as the backbone, LipSim provides guarded areas around each data point and certificates for all perturbations within an $\ell_2$ ball. Finally, a comprehensive set of experiments shows the performance of LipSim in terms of natural and certified scores and on the image retrieval application. The code is available at https://github.com/SaraGhazanfari/LipSim.

Sara Ghazanfari, Siddharth Garg, Prashanth Krishnamurthy et al.

Multimodal Large Language Models (MLLMs) have made rapid progress in single-video understanding, yet their ability to reason across multiple independent video streams remains poorly understood. Existing multi-video benchmarks rely largely on human-annotated real-world footage, limiting the precision of spatial, temporal, and physical ground truth and making it difficult to diagnose model failures. We introduce SYNCR, a controlled synthetic benchmark for cross-video reasoning with programmatically verified grounding. Built using Habitat, Kubric, and CLEVRER simulator engines, SYNCR contains 8,163 multi-video question-answer pairs grounded in 9,650 unique videos. It evaluates MLLMs across eight tasks spanning four diagnostic pillars: Temporal Alignment, Spatial Tracking, Comparative Reasoning, and Holistic Synthesis. Our zero-shot evaluation of leading open- and closed-weight MLLMs reveals a substantial gap between current models and humans: the best model achieves only 52.5% average accuracy, compared to an 89.5% human baseline. Models perform relatively well on temporal ordering but struggle with precise physical and spatial reasoning, with the best model reaching only 26.0% accuracy on Kinematic Comparison. We further find that parameter scaling and reasoning-specialized post-training improve temporal alignment capabilities, but do not reliably address fine-grained physical tracking or global spatial synthesis. Finally, an exploratory sim-to-real correlation analysis suggests that several SYNCR tasks track model-level trends on real-world multi-video benchmarks, while also exposing reasoning capabilities underrepresented by existing evaluations. Code available at https://github.com/SaraGhazanfari/SYNCR.

Sara Ghazanfari, Ali Rasteh, Seyed Abolfazl Motahari et al.

Isoforms are mRNAs produced from the same gene site in the phenomenon called Alternative Splicing. Studies have shown that more than 95% of human multi-exon genes have undergone alternative splicing. Although there are few changes in mRNA sequence, They may have a systematic effect on cell function and regulation. It is widely reported that isoforms of a gene have distinct or even contrasting functions. Most studies have shown that alternative splicing plays a significant role in human health and disease. Despite the wide range of gene function studies, there is little information about isoforms' functionalities. Recently, some computational methods based on Multiple Instance Learning have been proposed to predict isoform function using gene function and gene expression profile. However, their performance is not desirable due to the lack of labeled training data. In addition, probabilistic models such as Conditional Random Field (CRF) have been used to model the relation between isoforms. This project uses all the data and valuable information such as isoform sequences, expression profiles, and gene ontology graphs and proposes a comprehensive model based on Deep Neural Networks. The UniProt Gene Ontology (GO) database is used as a standard reference for gene functions. The NCBI RefSeq database is used for extracting gene and isoform sequences, and the NCBI SRA database is used for expression profile data. Metrics such as Receiver Operating Characteristic Area Under the Curve (ROC AUC) and Precision-Recall Under the Curve (PR AUC) are used to measure the prediction accuracy.

Sara Ghazanfari, Francesco Croce, Nicolas Flammarion et al.

Recent work has shown that eliciting Large Language Models (LLMs) to generate reasoning traces in natural language before answering the user's request can significantly improve their performance across tasks. This approach has been extended to multimodal LLMs, where the models can produce chain-of-thoughts (CoT) about the content of input images and videos. In this work, we propose to obtain video LLMs whose reasoning steps are grounded in, and explicitly refer to, the relevant video frames. For this, we first create CoF-Data, a large dataset of diverse questions, answers, and corresponding frame-grounded reasoning traces about both natural and synthetic videos, spanning various topics and tasks. Then, we fine-tune existing video LLMs on this chain-of-frames (CoF) data. Our approach is simple and self-contained, and, unlike existing approaches for video CoT, does not require auxiliary networks to select or caption relevant frames. We show that our models based on CoF are able to generate chain-of-thoughts that accurately refer to the key frames to answer the given question. This, in turn, leads to improved performance across multiple video understanding benchmarks, for example, surpassing leading video LLMs on Video-MME, MVBench, and VSI-Bench, and notably reducing the hallucination rate. Code available at https://github.com/SaraGhazanfari/CoF}{github.com/SaraGhazanfari/CoF.

Sara Ghazanfari, Siddharth Garg, Nicolas Flammarion et al.

Human perception of similarity across uni- and multimodal inputs is highly complex, making it challenging to develop automated metrics that accurately mimic it. General purpose vision-language models, such as CLIP and large multi-modal models (LMMs), can be applied as zero-shot perceptual metrics, and several recent works have developed models specialized in narrow perceptual tasks. However, the extent to which existing perceptual metrics align with human perception remains unclear. To investigate this question, we introduce UniSim-Bench, a benchmark encompassing 7 multi-modal perceptual similarity tasks, with a total of 25 datasets. Our evaluation reveals that while general-purpose models perform reasonably well on average, they often lag behind specialized models on individual tasks. Conversely, metrics fine-tuned for specific tasks fail to generalize well to unseen, though related, tasks. As a first step towards a unified multi-task perceptual similarity metric, we fine-tune both encoder-based and generative vision-language models on a subset of the UniSim-Bench tasks. This approach yields the highest average performance, and in some cases, even surpasses taskspecific models. Nevertheless, these models still struggle with generalization to unseen tasks, highlighting the ongoing challenge of learning a robust, unified perceptual similarity metric capable of capturing the human notion of similarity. The code and models are available at https://github.com/SaraGhazanfari/UniSim.

Sara Ghazanfari, Wei-An Lin, Haitong Tian et al.

Visually-guided image editing, where edits are conditioned on both visual cues and textual prompts, has emerged as a powerful paradigm for fine-grained, controllable content generation. Although recent generative models have shown remarkable capabilities, existing evaluations remain simple and insufficiently representative of real-world editing challenges. We present SpotEdit, a comprehensive benchmark designed to systematically assess visually-guided image editing methods across diverse diffusion, autoregressive, and hybrid generative models, uncovering substantial performance disparities. To address a critical yet underexplored challenge, our benchmark includes a dedicated component on hallucination, highlighting how leading models, such as GPT-4o, often hallucinate the existence of a visual cue and erroneously perform the editing task. Our code and benchmark are publicly released at https://github.com/SaraGhazanfari/SpotEdit.