63.2AIJun 2
GTBench: A Curriculum-Grounded Benchmark for Evaluating LLMs as Mathematical Research Assistants in Graph TheoryNoujoud Nader, Ibrahem Aljabea, Patrick Diehl et al.
Large language models (LLMs) are increasingly used as self-study assistants in technical disciplines, yet their reliability as mathematical reasoning assistants remains poorly understood. We introduce GTBench, a curriculum-grounded benchmark for evaluating LLMs as mathematical research assistants in graph theory, comprising 63 problems organized into three groups of increasing difficulty: undergraduate definitions and basic properties (Group 1), algorithm tracing and structural reasoning (Group 2), and graduate-level proof construction (Group 3). Problems are sourced from verified academic materials including Diestel's Graph Theory. We evaluate five frontier models -- GPT-5, Claude Sonnet 4.6, Gemini 2.5 Flash-Lite, Llama 3.3 70B, and Mistral Large 3 -- under zero-shot and chain-of-thought prompting, using exact-match and LLM-as-judge evaluation for Groups 1 and 2, and a hybrid human expert and LLM-as-judge protocol for Group 3. Our results reveal a pronounced performance hierarchy: GPT-5 approaches ceiling on Group 1 (95.8% zero-shot) and maintains meaningful accuracy on graduate proofs (82%), while all other models degrade substantially with difficulty, with Llama achieving 0% under human evaluation on Group 3 zero-shot. Failure mode analysis shows that correct algorithm, wrong execution errors dominate Groups 1 and 2, while Group 3 additionally surfaces incomplete reasoning failures and reveals systematic disagreement between human evaluators and the automated judge, particularly on verbose or near-complete proofs (kappa = 0.48-0.83 across human pairs). GTBench provides the first curriculum-grounded evaluation framework for graph-theoretic reasoning in LLMs, with direct implications for the governance of AI tools in mathematical education and scientific research.
LGMar 7, 2024
Storm Surge Modeling in the AI ERA: Using LSTM-based Machine Learning for Enhancing Forecasting AccuracyStefanos Giaremis, Noujoud Nader, Clint Dawson et al.
Physics simulation results of natural processes usually do not fully capture the real world. This is caused for instance by limits in what physical processes are simulated and to what accuracy. In this work we propose and analyze the use of an LSTM-based deep learning network machine learning (ML) architecture for capturing and predicting the behavior of the systemic error for storm surge forecast models with respect to real-world water height observations from gauge stations during hurricane events. The overall goal of this work is to predict the systemic error of the physics model and use it to improve the accuracy of the simulation results post factum. We trained our proposed ML model on a dataset of 61 historical storms in the coastal regions of the U.S. and we tested its performance in bias correcting modeled water level data predictions from hurricane Ian (2022). We show that our model can consistently improve the forecasting accuracy for hurricane Ian -- unknown to the ML model -- at all gauge station coordinates used for the initial data. Moreover, by examining the impact of using different subsets of the initial training dataset, containing a number of relatively similar or different hurricanes in terms of hurricane track, we found that we can obtain similar quality of bias correction by only using a subset of six hurricanes. This is an important result that implies the possibility to apply a pre-trained ML model to real-time hurricane forecasting results with the goal of bias correcting and improving the produced simulation accuracy. The presented work is an important first step in creating a bias correction system for real-time storm surge forecasting applicable to the full simulation area. It also presents a highly transferable and operationally applicable methodology for improving the accuracy in a wide range of physics simulation scenarios beyond storm surge forecasting.
7.8LGApr 22
Storm Surge Modeling, Bias Correction, Graph Neural Networks, Graph Convolution NetworksNoujoud Nader, Stefanos Giaremis, Clint Dawson et al.
Storm surge forecasting remains a critical challenge in mitigating the impacts of tropical cyclones on coastal regions, particularly given recent trends of rapid intensification and increasing nearshore storm activity. Traditional high fidelity numerical models such as ADCIRC, while robust, are often hindered by inevitable uncertainties arising from various sources. To address these challenges, this study introduces StormNet, a spatio-temporal graph neural network (GNN) designed for bias correction of storm surge forecasts. StormNet integrates graph convolutional (GCN) and graph attention (GAT) mechanisms with long short-term memory (LSTM) components to capture complex spatial and temporal dependencies among water-level gauge stations. The model was trained using historical hurricane data from the U.S. Gulf Coast and evaluated on Hurricane Idalia (2023). Results demonstrate that StormNet can effectively reduce the root mean square error (RMSE) in water-level predictions by more than 70\% for 48-hour forecasts and above 50\% for 72-hour forecasts, as well as outperform a sequential LSTM baseline, particularly for longer prediction horizons. The model also exhibits low training time, enhancing its applicability in real-time operational forecasting systems. Overall, StormNet provides a computationally efficient and physically meaningful framework for improving storm surge prediction accuracy and reliability during extreme weather events.
SEMay 21, 2024
Evaluating AI-generated code for C++, Fortran, Go, Java, Julia, Matlab, Python, R, and RustPatrick Diehl, Noujoud Nader, Steve Brandt et al.
This study evaluates the capabilities of ChatGPT versions 3.5 and 4 in generating code across a diverse range of programming languages. Our objective is to assess the effectiveness of these AI models for generating scientific programs. To this end, we asked ChatGPT to generate three distinct codes: a simple numerical integration, a conjugate gradient solver, and a parallel 1D stencil-based heat equation solver. The focus of our analysis was on the compilation, runtime performance, and accuracy of the codes. While both versions of ChatGPT successfully created codes that compiled and ran (with some help), some languages were easier for the AI to use than others (possibly because of the size of the training sets used). Parallel codes -- even the simple example we chose to study here -- also difficult for the AI to generate correctly.
DCMar 15, 2025
LLM & HPC:Benchmarking DeepSeek's Performance in High-Performance Computing TasksNoujoud Nader, Patrick Diehl, Steve Brandt et al.
Large Language Models (LLMs), such as GPT-4 and DeepSeek, have been applied to a wide range of domains in software engineering. However, their potential in the context of High-Performance Computing (HPC) much remains to be explored. This paper evaluates how well DeepSeek, a recent LLM, performs in generating a set of HPC benchmark codes: a conjugate gradient solver, the parallel heat equation, parallel matrix multiplication, DGEMM, and the STREAM triad operation. We analyze DeepSeek's code generation capabilities for traditional HPC languages like Cpp, Fortran, Julia and Python. The evaluation includes testing for code correctness, performance, and scaling across different configurations and matrix sizes. We also provide a detailed comparison between DeepSeek and another widely used tool: GPT-4. Our results demonstrate that while DeepSeek generates functional code for HPC tasks, it lags behind GPT-4, in terms of scalability and execution efficiency of the generated code.
QMFeb 10, 2024
Optimizing Uterine Synchronization Analysis in Pregnancy and Labor through Window Selection and Node OptimizationKamil Bader El Dine, Noujoud Nader, Mohamad Khalil et al.
Preterm labor (PL) has globally become the leading cause of death in children under the age of 5 years. To address this problem, this paper will provide a new approach by analyzing the EHG signals, which are recorded on the abdomen of the mother during labor and pregnancy. The EHG signal reflects the electrical activity that induces the mechanical contraction of the myometrium. Because EHGs are known to be non-stationary signals, and because we anticipate connectivity to alter during contraction, we applied the windowing approach on real signals to help us identify the best windows and the best nodes with the most significant data to be used for classification. The suggested pipeline includes i) divide the 16 EHG signals that are recorded from the abdomen of pregnant women in N windows; ii) apply the connectivity matrices on each window; iii) apply the Graph theory-based measures on the connectivity matrices on each window; iv) apply the consensus Matrix on each window in order to retrieve the best windows and the best nodes. Following that, several neural network and machine learning methods are applied to the best windows and best nodes to categorize pregnancy and labor contractions, based on the different input parameters (connectivity method alone, connectivity method plus graph parameters, best nodes, all nodes, best windows, all windows). Results showed that the best nodes are nodes 8, 9, 10, 11, and 12; while the best windows are 2, 4, and 5. The classification results obtained by using only these best nodes are better than when using the whole nodes. The results are always better when using the full burst, whatever the chosen nodes. Thus, the windowing approach proved to be an innovative technique that can improve the differentiation between labor and pregnancy EHG signals.
68.0DCMar 13
LLM-HPC++: Evaluating LLM-Generated Modern C++ and MPI+OpenMP Codes for Scalable Mandelbrot Set ComputationPatrick Diehl, Noujoud Nader, Deepti Gupta
Parallel programming remains one of the most challenging aspects of High-Performance Computing (HPC), requiring deep knowledge of synchronization, communication, and memory models. While modern C++ standards and frameworks like OpenMP and MPI have simplified parallelism, mastering these paradigms is still complex. Recently, Large Language Models (LLMs) have shown promise in automating code generation, but their effectiveness in producing correct and efficient HPC code is not well understood. In this work, we systematically evaluate leading LLMs including ChatGPT 4 and 5, Claude, and LLaMA on the task of generating C++ implementations of the Mandelbrot set using shared-memory, directive-based, and distributed-memory paradigms. Each generated program is compiled and executed with GCC 11.5.0 to assess its correctness, robustness, and scalability. Results show that ChatGPT-4 and ChatGPT-5 achieve strong syntactic precision and scalable performance.
LGApr 23, 2024
ML-based identification of the interface regions for coupling local and nonlocal modelsNoujoud Nader, Patrick Diehl, Marta D'Elia et al.
Local-nonlocal coupling approaches combine the computational efficiency of local models and the accuracy of nonlocal models. However, the coupling process is challenging, requiring expertise to identify the interface between local and nonlocal regions. This study introduces a machine learning-based approach to automatically detect the regions in which the local and nonlocal models should be used in a coupling approach. This identification process uses the loading functions and provides as output the selected model at the grid points. Training is based on datasets of loading functions for which reference coupling configurations are computed using accurate coupled solutions, where accuracy is measured in terms of the relative error between the solution to the coupling approach and the solution to the nonlocal model. We study two approaches that differ from one another in terms of the data structure. The first approach, referred to as the full-domain input data approach, inputs the full load vector and outputs a full label vector. In this case, the classification process is carried out globally. The second approach consists of a window-based approach, where loads are preprocessed and partitioned into windows and the problem is formulated as a node-wise classification approach in which the central point of each window is treated individually. The classification problems are solved via deep learning algorithms based on convolutional neural networks. The performance of these approaches is studied on one-dimensional numerical examples using F1-scores and accuracy metrics. In particular, it is shown that the windowing approach provides promising results, achieving an accuracy of 0.96 and an F1-score of 0.97. These results underscore the potential of the approach to automate coupling processes, leading to more accurate and computationally efficient solutions for material science applications.
SEAug 22, 2025
LLM-GUARD: Large Language Model-Based Detection and Repair of Bugs and Security Vulnerabilities in C++ and PythonAkshay Mhatre, Noujoud Nader, Patrick Diehl et al.
Large Language Models (LLMs) such as ChatGPT-4, Claude 3, and LLaMA 4 are increasingly embedded in software/application development, supporting tasks from code generation to debugging. Yet, their real-world effectiveness in detecting diverse software bugs, particularly complex, security-relevant vulnerabilities, remains underexplored. This study presents a systematic, empirical evaluation of these three leading LLMs using a benchmark of foundational programming errors, classic security flaws, and advanced, production-grade bugs in C++ and Python. The dataset integrates real code from SEED Labs, OpenSSL (via the Suresoft GLaDOS database), and PyBugHive, validated through local compilation and testing pipelines. A novel multi-stage, context-aware prompting protocol simulates realistic debugging scenarios, while a graded rubric measures detection accuracy, reasoning depth, and remediation quality. Our results show that all models excel at identifying syntactic and semantic issues in well-scoped code, making them promising for educational use and as first-pass reviewers in automated code auditing. Performance diminishes in scenarios involving complex security vulnerabilities and large-scale production code, with ChatGPT-4 and Claude 3 generally providing more nuanced contextual analyses than LLaMA 4. This highlights both the promise and the present constraints of LLMs in serving as reliable code analysis tools.