A Strong and Simple Deep Learning Baseline for BCI MI DecodingYassine El Ouahidi, Vincent Gripon, Bastien Pasdeloup et al.
We propose EEG-SimpleConv, a straightforward 1D convolutional neural network for Motor Imagery decoding in BCI. Our main motivation is to propose a simple and performing baseline to compare to, using only very standard ingredients from the literature. We evaluate its performance on four EEG Motor Imagery datasets, including simulated online setups, and compare it to recent Deep Learning and Machine Learning approaches. EEG-SimpleConv is at least as good or far more efficient than other approaches, showing strong knowledge-transfer capabilities across subjects, at the cost of a low inference time. We advocate that using off-the-shelf ingredients rather than coming with ad-hoc solutions can significantly help the adoption of Deep Learning approaches for BCI. We make the code of the models and the experiments accessible.
3.3SPOct 28, 2022
Spatial Graph Signal Interpolation with an Application for Merging BCI Datasets with Various DimensionalitiesYassine El Ouahidi, Lucas Drumetz, Giulia Lioi et al.
BCI Motor Imagery datasets usually are small and have different electrodes setups. When training a Deep Neural Network, one may want to capitalize on all these datasets to increase the amount of data available and hence obtain good generalization results. To this end, we introduce a spatial graph signal interpolation technique, that allows to interpolate efficiently multiple electrodes. We conduct a set of experiments with five BCI Motor Imagery datasets comparing the proposed interpolation with spherical splines interpolation. We believe that this work provides novel ideas on how to leverage graphs to interpolate electrodes and on how to homogenize multiple datasets.
1.8LGMar 9, 2022
Pruning Graph Convolutional Networks to select meaningful graph frequencies for fMRI decodingYassine El Ouahidi, Hugo Tessier, Giulia Lioi et al.
Graph Signal Processing is a promising framework to manipulate brain signals as it allows to encompass the spatial dependencies between the activity in regions of interest in the brain. In this work, we are interested in better understanding what are the graph frequencies that are the most useful to decode fMRI signals. To this end, we introduce a deep learning architecture and adapt a pruning methodology to automatically identify such frequencies. We experiment with various datasets, architectures and graphs, and show that low graph frequencies are consistently identified as the most important for fMRI decoding, with a stronger contribution for the functional graph over the structural one. We believe that this work provides novel insights on how graph-based methods can be deployed to increase fMRI decoding accuracy and interpretability.
10.2CLMar 20
EVE: A Domain-Specific LLM Framework for Earth IntelligenceÀlex R. Atrio, Antonio Lopez, Jino Rohit et al.
We introduce Earth Virtual Expert (EVE), the first open-source, end-to-end initiative for developing and deploying domain-specialized LLMs for Earth Intelligence. At its core is EVE-Instruct, a domain-adapted 24B model built on Mistral Small 3.2 and optimized for reasoning and question answering. On newly constructed Earth Observation and Earth Sciences benchmarks, it outperforms comparable models while preserving general capabilities. We release curated training corpora and the first systematic domain-specific evaluation benchmarks, covering MCQA, open-ended QA, and factuality. EVE further integrates RAG and a hallucination-detection pipeline into a production system deployed via API and GUI, supporting 350 pilot users so far. All models, datasets, and code are ready to be released under open licenses as contributions to our field at huggingface.co/eve-esa and github.com/eve-esa.
4.3SPMar 15, 2024
Unsupervised Adaptive Deep Learning Method For BCI Motor Imagery DecodingYassine El Ouahidi, Giulia Lioi, Nicolas Farrugia et al.
In the context of Brain-Computer Interfaces, we propose an adaptive method that reaches offline performance level while being usable online without requiring supervision. Interestingly, our method does not require retraining the model, as it consists in using a frozen efficient deep learning backbone while continuously realigning data, both at input and latent spaces, based on streaming observations. We demonstrate its efficiency for Motor Imagery brain decoding from electroencephalography data, considering challenging cross-subject scenarios. For reproducibility, we share the code of our experiments.
1.2QMJun 30, 2020
An Approach for Clustering Subjects According to Similarities in Cell Distributions within BiopsiesYassine El Ouahidi, Matis Feller, Matthieu Talagas et al.
In this paper, we introduce a novel and interpretable methodology to cluster subjects suffering from cancer, based on features extracted from their biopsies. Contrary to existing approaches, we propose here to capture complex patterns in the repartitions of their cells using histograms, and compare subjects on the basis of these repartitions. We describe here our complete workflow, including creation of the database, cells segmentation and phenotyping, computation of complex features, choice of a distance function between features, clustering between subjects using that distance, and survival analysis of obtained clusters. We illustrate our approach on a database of hematoxylin and eosin (H&E)-stained tissues of subjects suffering from Stage I lung adenocarcinoma, where our results match existing knowledge in prognosis estimation with high confidence.