Changhong Jing

Zhi Zhang, Yan Liu, Zhejing Hu et al.

Cross-subject EEG generalization is challenging due to substantial heterogeneity across subjects. Existing methods typically learn either a shared subject-invariant model or multiple subject-specialized experts, but these two paradigms fail in complementary ways: the former may over-reduce subject-specific discriminative signals, while the latter may under-reduce transferable structure. We show that their suitability depends on the reducibility cost of branch-specific functions to branch-invariant ones, and we further provide a theory-to-method mapping that instantiates alignment principles in cross-subject EEG learning. Based on this insight, we propose Shared-Routed Expert Alignment (SREA), a collaborative framework that couples a shared expert for reducible invariant functions with routed experts for irreducible subject-specific functions. SREA trains the shared branch with joint embedding over augmented temporal neighbors, the routed branch with prototype-based sparse routing and expert specialization, and both branches with numerically stable mutual-guided reweighting based on cross-branch learnability gaps. Experiments on seven public EEG benchmarks across different tasks show that SREA consistently outperforms state-of-the-art methods and EEG foundation models.

Changwei Gong, Changhong Jing, Yanyan Shen et al.

Dynamic community detection has been prospered as a powerful tool for quantifying changes in dynamic brain network connectivity patterns by identifying strongly connected sets of nodes. However, as the network science problems and network data to be processed become gradually more sophisticated, it awaits a better method to efficiently learn low dimensional representation from dynamic network data and reveal its latent function that changes over time in the brain network. In this work, an adversarial temporal graph representation learning (ATGRL) framework is proposed to detect dynamic communities from a small sample of brain network data. It adopts a novel temporal graph attention network as an encoder to capture more efficient spatio-temporal features by attention mechanism in both spatial and temporal dimensions. In addition, the framework employs adversarial training to guide the learning of temporal graph representation and optimize the measurable modularity loss to maximize the modularity of community. Experiments on the real-world brain networks datasets are demonstrated to show the effectiveness of this new method.

Changwei Gong, Changhong Jing, Junren Pan et al.

Functional alterations in the relevant neural circuits occur from drug addiction over a certain period. And these significant alterations are also revealed by analyzing fMRI. However, because of fMRI's high dimensionality and poor signal-to-noise ratio, it is challenging to encode efficient and robust brain regional embeddings for both graph-level identification and region-level biomarkers detection tasks between nicotine addiction (NA) and healthy control (HC) groups. In this work, we represent the fMRI of the rat brain as a graph with biological attributes and propose a novel feature-selected graph spatial attention network(FGSAN) to extract the biomarkers of addiction and identify from these brain networks. Specially, a graph spatial attention encoder is employed to capture the features of spatiotemporal brain networks with spatial information. The method simultaneously adopts a Bayesian feature selection strategy to optimize the model and improve classification task by constraining features. Experiments on an addiction-related neural imaging dataset show that the proposed model can obtain superior performance and detect interpretable biomarkers associated with addiction-relevant neural circuits.

Qiankun Zuo, Ruiheng Li, Yi Di et al.

Mapping from functional connectivity (FC) to structural connectivity (SC) can facilitate multimodal brain network fusion and discover potential biomarkers for clinical implications. However, it is challenging to directly bridge the reliable non-linear mapping relations between SC and functional magnetic resonance imaging (fMRI). In this paper, a novel diffusision generative adversarial network-based fMRI-to-SC (DiffGAN-F2S) model is proposed to predict SC from brain fMRI in an end-to-end manner. To be specific, the proposed DiffGAN-F2S leverages denoising diffusion probabilistic models (DDPMs) and adversarial learning to efficiently generate high-fidelity SC through a few steps from fMRI. By designing the dual-channel multi-head spatial attention (DMSA) and graph convolutional modules, the symmetric graph generator first captures global relations among direct and indirect connected brain regions, then models the local brain region interactions. It can uncover the complex mapping relations between fMRI and structural connectivity. Furthermore, the spatially connected consistency loss is devised to constrain the generator to preserve global-local topological information for accurate intrinsic SC prediction. Testing on the public Alzheimer's Disease Neuroimaging Initiative (ADNI) dataset, the proposed model can effectively generate empirical SC-preserved connectivity from four-dimensional imaging data and shows superior performance in SC prediction compared with other related models. Furthermore, the proposed model can identify the vast majority of important brain regions and connections derived from the empirical method, providing an alternative way to fuse multimodal brain networks and analyze clinical disease.

Changwei Gong, Changhong Jing, Ye Li et al.

The identification of addiction-related circuits is critical for explaining addiction processes and developing addiction treatments. And models of functional addiction circuits developed from functional imaging are an effective tool for discovering and verifying addiction circuits. However, analyzing functional imaging data of addiction and detecting functional addiction circuits still have challenges. We have developed a data-driven and end-to-end generative artificial intelligence(AI) framework to address these difficulties. The framework integrates dynamic brain network modeling and novel network architecture networks architecture, including temporal graph Transformer and contrastive learning modules. A complete workflow is formed by our generative AI framework: the functional imaging data, from neurobiological experiments, and computational modeling, to end-to-end neural networks, is transformed into dynamic nicotine addiction-related circuits. It enables the detection of addiction-related brain circuits with dynamic properties and reveals the underlying mechanisms of addiction.

Tong Zhou, Chen Ding, Changhong Jing et al.

The relationship between brain structure and function is critical for revealing the pathogenesis of brain disorders, including Alzheimer's disease (AD). However, mapping brain structure to function connections is a very challenging task. In this work, a bidirectional graph generative adversarial network (BG-GAN) is proposed to represent brain structure-function connections. Specifically, by designing a module incorporating inner graph convolution network (InnerGCN), the generators of BG-GAN can employ features of direct and indirect brain regions to learn the mapping function between the structural domain and the functional domain. Besides, a new module named Balancer is designed to counterpoise the optimization between generators and discriminators. By introducing the Balancer into BG-GAN, both the structural generator and functional generator can not only alleviate the issue of mode collapse but also learn complementarity of structural and functional features. Experimental results using the Alzheimer's Disease Neuroimaging Initiative (ADNI) dataset show that both generated structure and function connections can improve the identification accuracy of AD. The experimental findings suggest that the relationship between brain structure and function is not a complete one-to-one correspondence. They also suggest that brain structure is the basis of brain function, and the strong structural connections are majorly accompanied by strong functional connections.

Yihang Dong, Changhong Jing, Shuqiang Wang

Electroencephalography (EEG) has become one of the key modalities underpinning brain-computer interfaces (BCIs) due to its high temporal resolution, rapid responsiveness, non-invasiveness, low cost, and portability. However, EEG signals are substantially inferior to intracranial EEG (iEEG) in signal-to-noise ratio and local spatial resolution, whereas iEEG suffers from extremely limited clinical accessibility owing to its invasive nature, hindering widespread application. To address this challenge, this study proposes a unified data-and prior knowledge-driven framework for EEG-iEEG representational enhancement. Guided by the principle that "geometric structure dictates function", the framework maps static cortical anatomy onto dynamic constraints governing neural signal propagation and integrates general-purpose neural representations extracted by a pre-trained large EEG model to explicitly model signal transmission through the brain. Enhanced EEG signals are then synthesized via a multidimensional representation diffusion process. Numerous experimental results demonstrate that the generated enhanced EEG signals effectively recover the neural activity patterns lost during propagation through the brain. This finding indicates that the performance ceiling of BCIs is constrained not only by acquisition hardware but also by the depth to which the generative model resolves the mechanisms of neural signal propagation. Collectively, the proposed framework provides a viable pathway toward acquiring high-fidelity neural signals at low cost.

Changhong Jing, Yan Liu, Shuqiang Wang et al.

Cross-subject electroencephalography (EEG) decoding remains a fundamental challenge in brain-computer interface (BCI) research due to substantial inter-subject variability and the scarcity of subject-invariant representations. This paper proposed PTSM (Physiology-aware and Task-invariant Spatio-temporal Modeling), a novel framework for interpretable and robust EEG decoding across unseen subjects. PTSM employs a dual-branch masking mechanism that independently learns personalized and shared spatio-temporal patterns, enabling the model to preserve individual-specific neural characteristics while extracting task-relevant, population-shared features. The masks are factorized across temporal and spatial dimensions, allowing fine-grained modulation of dynamic EEG patterns with low computational overhead. To further address representational entanglement, PTSM enforces information-theoretic constraints that decompose latent embeddings into orthogonal task-related and subject-related subspaces. The model is trained end-to-end via a multi-objective loss integrating classification, contrastive, and disentanglement objectives. Extensive experiments on cross-subject motor imagery datasets demonstrate that PTSM achieves strong zero-shot generalization, outperforming state-of-the-art baselines without subject-specific calibration. Results highlight the efficacy of disentangled neural representations for achieving both personalized and transferable decoding in non-stationary neurophysiological settings.

Yifei Tang, Hongjie Jiang, Changhong Jing et al.

Functional brain network analysis has become an indispensable tool for brain disease analysis. It is profoundly impacted by deep learning methods, which can characterize complex connections between ROIs. However, the research on foundation models of brain network is limited and constrained to a single dimension, which restricts their extensive application in neuroscience. In this study, we propose a fine-tuned brain network model for brain disease diagnosis. It expands brain region representations across multiple dimensions based on the original brain network model, thereby enhancing its generalizability. Our model consists of two key modules: (1)an adapter module that expands brain region features across different dimensions. (2)a fine-tuned foundation brain network model, based on self-supervised learning and pre-trained on fMRI data from thousands of participants. Specifically, its transformer block is able to effectively extract brain region features and compute the inter-region associations. Moreover, we derive a compact latent representation of the brain network for brain disease diagnosis. Our downstream experiments in this study demonstrate that the proposed model achieves superior performance in brain disease diagnosis, which potentially offers a promising approach in brain network analysis research.