IVApr 11, 2023Code
Deep-learning Assisted Detection and Quantification of (oo)cysts of Giardia and Cryptosporidium on Smartphone Microscopy ImagesSuprim Nakarmi, Sanam Pudasaini, Safal Thapaliya et al.
The consumption of microbial-contaminated food and water is responsible for the deaths of millions of people annually. Smartphone-based microscopy systems are portable, low-cost, and more accessible alternatives for the detection of Giardia and Cryptosporidium than traditional brightfield microscopes. However, the images from smartphone microscopes are noisier and require manual cyst identification by trained technicians, usually unavailable in resource-limited settings. Automatic detection of (oo)cysts using deep-learning-based object detection could offer a solution for this limitation. We evaluate the performance of four state-of-the-art object detectors to detect (oo)cysts of Giardia and Cryptosporidium on a custom dataset that includes both smartphone and brightfield microscopic images from vegetable samples. Faster RCNN, RetinaNet, You Only Look Once (YOLOv8s), and Deformable Detection Transformer (Deformable DETR) deep-learning models were employed to explore their efficacy and limitations. Our results show that while the deep-learning models perform better with the brightfield microscopy image dataset than the smartphone microscopy image dataset, the smartphone microscopy predictions are still comparable to the prediction performance of non-experts. Also, we publicly release brightfield and smartphone microscopy datasets with the benchmark results for the detection of Giardia and Cryptosporidium, independently captured on reference (or standard lab setting) and vegetable samples. Our code and dataset are available at https://github.com/naamiinepal/smartphone_microscopy and https://doi.org/10.5281/zenodo.7813183, respectively.
LGJan 30
Fed-Listing: Federated Label Distribution Inference in Graph Neural NetworksSuprim Nakarmi, Junggab Son, Yue Zhao et al.
Graph Neural Networks (GNNs) have been intensively studied for their expressive representation and learning performance on graph-structured data, enabling effective modeling of complex relational dependencies among nodes and edges in various domains. However, the standalone GNNs can unleash threat surfaces and privacy implications, as some sensitive graph-structured data is collected and processed in a centralized setting. To solve this issue, Federated Graph Neural Networks (FedGNNs) are proposed to facilitate collaborative learning over decentralized local graph data, aiming to preserve user privacy. Yet, emerging research indicates that even in these settings, shared model updates, particularly gradients, can unintentionally leak sensitive information of local users. Numerous privacy inference attacks have been explored in traditional federated learning and extended to graph settings, but the problem of label distribution inference in FedGNNs remains largely underexplored. In this work, we introduce Fed-Listing (Federated Label Distribution Inference in GNNs), a novel gradient-based attack designed to infer the private label statistics of target clients in FedGNNs without access to raw data or node features. Fed-Listing only leverages the final-layer gradients exchanged during training to uncover statistical patterns that reveal class proportions in a stealthy manner. An auxiliary shadow dataset is used to generate diverse label partitioning strategies, simulating various client distributions, on which the attack model is obtained. Extensive experiments on four benchmark datasets and three GNN architectures show that Fed-Listing significantly outperforms existing baselines, including random guessing and Decaf, even under challenging non-i.i.d. scenarios. Moreover, applying defense mechanisms can barely reduce our attack performance, unless the model's utility is severely degraded.