Taehun Kim

Yuan He, Jiaoyan Chen, Hang Dong et al. · oxford

Integrating deep learning techniques, particularly language models (LMs), with knowledge representation techniques like ontologies has raised widespread attention, urging the need of a platform that supports both paradigms. Although packages such as OWL API and Jena offer robust support for basic ontology processing features, they lack the capability to transform various types of information within ontologies into formats suitable for downstream deep learning-based applications. Moreover, widely-used ontology APIs are primarily Java-based while deep learning frameworks like PyTorch and Tensorflow are mainly for Python programming. To address the needs, we present DeepOnto, a Python package designed for ontology engineering with deep learning. The package encompasses a core ontology processing module founded on the widely-recognised and reliable OWL API, encapsulating its fundamental features in a more "Pythonic" manner and extending its capabilities to incorporate other essential components including reasoning, verbalisation, normalisation, taxonomy, projection, and more. Building on this module, DeepOnto offers a suite of tools, resources, and algorithms that support various ontology engineering tasks, such as ontology alignment and completion, by harnessing deep learning methods, primarily pre-trained LMs. In this paper, we also demonstrate the practical utility of DeepOnto through two use-cases: the Digital Health Coaching in Samsung Research UK and the Bio-ML track of the Ontology Alignment Evaluation Initiative (OAEI).

Taehun Kim, Kunhee Kim, Joonyeong Lee et al.

Salient object detection (SOD) has been in the spotlight recently, yet has been studied less for high-resolution (HR) images. Unfortunately, HR images and their pixel-level annotations are certainly more labor-intensive and time-consuming compared to low-resolution (LR) images and annotations. Therefore, we propose an image pyramid-based SOD framework, Inverse Saliency Pyramid Reconstruction Network (InSPyReNet), for HR prediction without any of HR datasets. We design InSPyReNet to produce a strict image pyramid structure of saliency map, which enables to ensemble multiple results with pyramid-based image blending. For HR prediction, we design a pyramid blending method which synthesizes two different image pyramids from a pair of LR and HR scale from the same image to overcome effective receptive field (ERF) discrepancy. Our extensive evaluations on public LR and HR SOD benchmarks demonstrate that InSPyReNet surpasses the State-of-the-Art (SotA) methods on various SOD metrics and boundary accuracy.

Kunhee Kim, Sanghun Park, Eunyeong Jeon et al.

Current image-to-image translations do not control the output domain beyond the classes used during training, nor do they interpolate between different domains well, leading to implausible results. This limitation largely arises because labels do not consider the semantic distance. To mitigate such problems, we propose a style-aware discriminator that acts as a critic as well as a style encoder to provide conditions. The style-aware discriminator learns a controllable style space using prototype-based self-supervised learning and simultaneously guides the generator. Experiments on multiple datasets verify that the proposed model outperforms current state-of-the-art image-to-image translation methods. In contrast with current methods, the proposed approach supports various applications, including style interpolation, content transplantation, and local image translation.

Taehun Kim, Jung Chan Lee, ByoungSeon Choi

The positivity of the Gram-Charlier probability density function has been a subject of extensive study for decades. Since Barton and Dennis (1952) introduced numerical positivity conditions, no analytic closed-form expression was available until Kwon (2019, 2022) proposed analytic solutions for the valid region of Gram-Charlier densities. Despite the significance of the analytical solutions, the expressions remain algebraically complex. As these conditions for the Gram-Charlier densities are determined by a quartic polynomial, it is essential to investigate its positivity. In this work, necessary and sufficient conditions for the positivity of a quartic polynomial are derived through a separation method. Based on these conditions, more concise analytic expressions for the positivity of the Gram-Charlier density are proposed.

Eunkyu Oh, Taehun Kim, Yunhu Ji et al.

Time series data are ubiquitous in real-world applications. However, one of the most common problems is that the time series data could have missing values by the inherent nature of the data collection process. So imputing missing values from multivariate (correlated) time series data is imperative to improve a prediction performance while making an accurate data-driven decision. Conventional works for imputation simply delete missing values or fill them based on mean/zero. Although recent works based on deep neural networks have shown remarkable results, they still have a limitation to capture the complex generation process of the multivariate time series. In this paper, we propose a novel imputation method for multivariate time series data, called STING (Self-attention based Time-series Imputation Networks using GAN). We take advantage of generative adversarial networks and bidirectional recurrent neural networks to learn latent representations of the time series. In addition, we introduce a novel attention mechanism to capture the weighted correlations of the whole sequence and avoid potential bias brought by unrelated ones. Experimental results on three real-world datasets demonstrate that STING outperforms the existing state-of-the-art methods in terms of imputation accuracy as well as downstream tasks with the imputed values therein.

Hyunsik Jeon, Jun-Gi Jang, Taehun Kim et al.

How can we recommend existing bundles to users accurately? How can we generate new tailored bundles for users? Recommending a bundle, or a group of various items, has attracted widespread attention in e-commerce owing to the increased satisfaction of both users and providers. Bundle matching and bundle generation are two representative tasks in bundle recommendation. The bundle matching task is to correctly match existing bundles to users while the bundle generation is to generate new bundles that users would prefer. Although many recent works have developed bundle recommendation models, they fail to achieve high accuracy since they do not handle heterogeneous data effectively and do not learn a method for customized bundle generation. In this paper, we propose BundleMage, an accurate approach for bundle matching and generation. BundleMage effectively mixes user preferences of items and bundles using an adaptive gate technique to achieve high accuracy for the bundle matching. BundleMage also generates a personalized bundle by learning a generation module that exploits a user preference and the characteristic of a given incomplete bundle to be completed. BundleMage further improves its performance using multi-task learning with partially shared parameters. Through extensive experiments, we show that BundleMage achieves up to 6.6% higher nDCG in bundle matching and 6.3x higher nDCG in bundle generation than the best competitors. We also provide qualitative analysis that BundleMage effectively generates bundles considering both the tastes of users and the characteristics of target bundles.

Eunkyu Oh, Taehun Kim, Minsoo Kim et al.

Session-based recommendations aim to predict the next behavior of users based on ongoing sessions. The previous works have been modeling the session as a variable-length of a sequence of items and learning the representation of both individual items and the aggregated session. Recent research has applied graph neural networks with an attention mechanism to capture complicated item transitions and dependencies by modeling the sessions into graph-structured data. However, they still face fundamental challenges in terms of data and learning methodology such as sparse supervision signals and noisy interactions in sessions, leading to sub-optimal performance. In this paper, we propose SR-GCL, a novel contrastive learning framework for a session-based recommendation. As a crucial component of contrastive learning, we propose two global context enhanced data augmentation methods while maintaining the semantics of the original session. The extensive experiment results on two real-world E-commerce datasets demonstrate the superiority of SR-GCL as compared to other state-of-the-art methods.

Taehun Kim, Hyeryun Park, Hyeonhoon Lee et al.

Clinical data-driven research requires clinical expertise, programming skills, access to patient data, and extensive documentation, creating barriers and slowing the pace for clinicians and external researchers. To address this, we developed the Clinical Agentic Research Intelligence System (CARIS) that automates the workflow: research planning, literature search, cohort construction, Institutional Review Board (IRB) documentation, Vibe Machine Learning (ML), and report generation, with human-in-the-loop refinement. CARIS integrates Large Language Models (LLMs) with modular tools through the Model Context Protocol (MCP), enabling natural language-driven research without coding while allowing users to access only outputs. We evaluated CARIS on three heterogeneous datasets with distinct clinical tasks, where it completed planning and IRB documentation within four iterations, supported Vibe ML, and generated reports, achieving 96% completeness in LLM-based evaluation and 82% in human evaluation. CARIS demonstrates potential to reduce documentation burden and technical barriers, accelerating data-driven clinical research across public and private data environments.

Taehun Kim, Hyemin Lee, Daijin Kim

We propose Uncertainty Augmented Context Attention network (UACANet) for polyp segmentation which consider a uncertain area of the saliency map. We construct a modified version of U-Net shape network with additional encoder and decoder and compute a saliency map in each bottom-up stream prediction module and propagate to the next prediction module. In each prediction module, previously predicted saliency map is utilized to compute foreground, background and uncertain area map and we aggregate the feature map with three area maps for each representation. Then we compute the relation between each representation and each pixel in the feature map. We conduct experiments on five popular polyp segmentation benchmarks, Kvasir, CVC-ClinicDB, ETIS, CVC-ColonDB and CVC-300, and achieve state-of-the-art performance. Especially, we achieve 76.6% mean Dice on ETIS dataset which is 13.8% improvement compared to the previous state-of-the-art method. Source code is publicly available at https://github.com/plemeri/UACANet

Eunkyu Oh, Taehun Kim

Session-based recommendations which predict the next action by understanding a user's interaction behavior with items within a relatively short ongoing session have recently gained increasing popularity. Previous research has focused on capturing the dynamics of sequential dependencies from complicated item transitions in a session by means of recurrent neural networks, self-attention models, and recently, mostly graph neural networks. Despite the plethora of different models relying on the order of items in a session, few approaches have been proposed for dealing better with the temporal implications between interactions. We present Temporal Graph Neural Networks (TempGNN), a generic framework for capturing the structural and temporal dynamics in complex item transitions utilizing temporal embedding operators on nodes and edges on dynamic session graphs, represented as sequences of timed events. Extensive experimental results show the effectiveness and adaptability of the proposed method by plugging it into existing state-of-the-art models. Finally, TempGNN achieved state-of-the-art performance on two real-world e-commerce datasets.

Taehun Kim, Jinseong Kim, Daijin Kim

Semantic segmentation networks adopt transfer learning from image classification networks which occurs a shortage of spatial context information. For this reason, we propose Spatial Context Memoization (SpaM), a bypassing branch for spatial context by retaining the input dimension and constantly communicating its spatial context and rich semantic information mutually with the backbone network. Multi-scale context information for semantic segmentation is crucial for dealing with diverse sizes and shapes of target objects in the given scene. Conventional multi-scale context scheme adopts multiple effective receptive fields by multiple dilation rates or pooling operations, but often suffer from misalignment problem with respect to the target pixel. To this end, we propose Meshgrid Atrous Convolution Consensus (MetroCon^2) which brings multi-scale scheme into fine-grained multi-scale object context using convolutions with meshgrid-like scattered dilation rates. SpaceMeshLab (ResNet-101 + SpaM + MetroCon^2) achieves 82.0% mIoU in Cityscapes test and 53.5% mIoU on Pascal-Context validation set.

Ranggi Hwang, Taehun Kim, Youngeun Kwon et al.

Personalized recommendations are the backbone machine learning (ML) algorithm that powers several important application domains (e.g., ads, e-commerce, etc) serviced from cloud datacenters. Sparse embedding layers are a crucial building block in designing recommendations yet little attention has been paid in properly accelerating this important ML algorithm. This paper first provides a detailed workload characterization on personalized recommendations and identifies two significant performance limiters: memory-intensive embedding layers and compute-intensive multi-layer perceptron (MLP) layers. We then present Centaur, a chiplet-based hybrid sparse-dense accelerator that addresses both the memory throughput challenges of embedding layers and the compute limitations of MLP layers. We implement and demonstrate our proposal on an Intel HARPv2, a package-integrated CPU+FPGA device, which shows a 1.7-17.2x performance speedup and 1.7-19.5x energy-efficiency improvement than conventional approaches.

Seungcheol Park, Huiwen Xu, Taehun Kim et al.

Given a set of heterogeneous source datasets with their classifiers, how can we quickly find the most useful source dataset for a specific target task? We address the problem of measuring transferability between source and target datasets, where the source and the target have different feature spaces and distributions. We propose Transmeter, a fast and accurate method to estimate the transferability of two heterogeneous multivariate datasets. We address three challenges in measuring transferability between two heterogeneous multivariate datasets: reducing time, minimizing domain gap, and extracting meaningful homogeneous representations. To overcome the above issues, we utilize a pre-trained source model, an adversarial network, and an encoder-decoder architecture. Extensive experiments on heterogeneous multivariate datasets show that Transmeter gives the most accurate transferability measurement with up to 10.3 times faster performance than its competitor. We also show that selecting the best source data with Transmeter followed by a full transfer leads to the best transfer accuracy and the fastest running time.