Farid Ghareh Mohammadi

Farzan Shenavarmasouleh, Farid Ghareh Mohammadi, Khaled M. Rasheed et al.

Deep learning (DL) along with never-ending advancements in computational processing and cloud technologies have bestowed us powerful analyzing tools and techniques in the past decade and enabled us to use and apply them in various fields of study. Health informatics is not an exception, and conversely, is the discipline that generates the most amount of data in today's era and can benefit from DL the most. Extracting features and finding complex patterns from a huge amount of raw data and transforming them into knowledge is a challenging task. Besides, various DL architectures have been proposed by researchers throughout the years to tackle different problems. In this paper, we provide a review of DL models and their broad application in bioinformatics and healthcare categorized by their architecture. In addition, we also go over some of the key challenges that still exist and can show up while conducting DL research.

Farid Ghareh Mohammadi, Cheng Chen, Farzan Shenavarmasouleh et al.

Understanding 3D point cloud models for learning purposes has become an imperative challenge for real-world identification such as autonomous driving systems. A wide variety of solutions using deep learning have been proposed for point cloud segmentation, object detection, and classification. These methods, however, often require a considerable number of model parameters and are computationally expensive. We study a semantic dimension of given 3D data points and propose an efficient method called Meta-Semantic Learning (Meta-SeL). Meta-SeL is an integrated framework that leverages two input 3D local points (input 3D models and part-segmentation labels), providing a time and cost-efficient, and precise projection model for a number of 3D recognition tasks. The results indicate that Meta-SeL yields competitive performance in comparison with other complex state-of-the-art work. Moreover, being random shuffle invariant, Meta-SeL is resilient to translation as well as jittering noise.

Farid Ghareh Mohammadi, Farzan Shenavarmasouleh, Hamid R. Arabnia

In recent years, smart healthcare IoT devices have become ubiquitous, but they work in isolated networks due to their policy. Having these devices connected in a network enables us to perform medical distributed data analysis. However, the presence of diverse IoT devices in terms of technology, structure, and network policy, makes it a challenging issue while applying traditional centralized learning algorithms on decentralized data collected from the IoT devices. In this study, we present an extensive review of the state-of-the-art machine learning applications particularly in healthcare, challenging issues in IoT, and corresponding promising solutions. Finally, we highlight some open-ended issues of IoT in healthcare that leaves further research studies and investigation for scientists.

Farid Ghareh Mohammadi, Farzan Shenavarmasouleh, Khaled Rasheed et al.

In the past 30 years, scientists have searched nature, including animals and insects, and biology in order to discover, understand, and model solutions for solving large-scale science challenges. The study of bionics reveals that how the biological structures, functions found in nature have improved our modern technologies. In this study, we present our discovery of evolutionary and nature-inspired algorithms applications in Data Science and Data Analytics in three main topics of pre-processing, supervised algorithms, and unsupervised algorithms. Among all applications, in this study, we aim to investigate four optimization algorithms that have been performed using the evolutionary and nature-inspired algorithms within data science and analytics. Feature selection optimization in pre-processing section, Hyper-parameter tuning optimization, and knowledge discovery optimization in supervised algorithms, and clustering optimization in the unsupervised algorithms.

Leila Zahedi, Farid Ghareh Mohammadi, M. Hadi Amini

Hyperparameter tuning in machine learning algorithms is a computationally challenging task due to the large-scale nature of the problem. In order to develop an efficient strategy for hyper-parameter tuning, one promising solution is to use swarm intelligence algorithms. Artificial Bee Colony (ABC) optimization lends itself as a promising and efficient optimization algorithm for this purpose. However, in some cases, ABC can suffer from a slow convergence rate or execution time due to the poor initial population of solutions and expensive objective functions. To address these concerns, a novel algorithm, OptABC, is proposed to help ABC algorithm in faster convergence toward a near-optimum solution. OptABC integrates artificial bee colony algorithm, K-Means clustering, greedy algorithm, and opposition-based learning strategy for tuning the hyper-parameters of different machine learning models. OptABC employs these techniques in an attempt to diversify the initial population, and hence enhance the convergence ability without significantly decreasing the accuracy. In order to validate the performance of the proposed method, we compare the results with previous state-of-the-art approaches. Experimental results demonstrate the effectiveness of the OptABC compared to existing approaches in the literature.

Farid Ghareh Mohammadi, Farzan Shenavarmasouleh, M. Hadi Amini et al.

The explosion of advancements in artificial intelligence, sensor technologies, and wireless communication activates ubiquitous sensing through distributed sensors. These sensors are various domains of networks that lead us to smart systems in healthcare, transportation, environment, and other relevant branches/networks. Having collaborative interaction among the smart systems connects end-user devices to each other which enables achieving a new integrated entity called Smart Cities. The goal of this study is to provide a comprehensive survey of data analytics in smart cities. In this paper, we aim to focus on one of the smart cities important branches, namely Smart Mobility, and its positive ample impact on the smart cities decision-making process. Intelligent decision-making systems in smart mobility offer many advantages such as saving energy, relaying city traffic, and more importantly, reducing air pollution by offering real-time useful information and imperative knowledge. Making a decision in smart cities in time is challenging due to various and high dimensional factors and parameters, which are not frequently collected. In this paper, we first address current challenges in smart cities and provide an overview of potential solutions to these challenges. Then, we offer a framework of these solutions, called universal smart cities decision making, with three main sections of data capturing, data analysis, and decision making to optimize the smart mobility within smart cities. With this framework, we elaborate on fundamental concepts of big data, machine learning, and deep leaning algorithms that have been applied to smart cities and discuss the role of these algorithms in decision making for smart mobility in smart cities.

Leila Zahedi, Farid Ghareh Mohammadi, M. Hadi Amini

Machine learning techniques lend themselves as promising decision-making and analytic tools in a wide range of applications. Different ML algorithms have various hyper-parameters. In order to tailor an ML model towards a specific application, a large number of hyper-parameters should be tuned. Tuning the hyper-parameters directly affects the performance (accuracy and run-time). However, for large-scale search spaces, efficiently exploring the ample number of combinations of hyper-parameters is computationally challenging. Existing automated hyper-parameter tuning techniques suffer from high time complexity. In this paper, we propose HyP-ABC, an automatic innovative hybrid hyper-parameter optimization algorithm using the modified artificial bee colony approach, to measure the classification accuracy of three ML algorithms, namely random forest, extreme gradient boosting, and support vector machine. Compared to the state-of-the-art techniques, HyP-ABC is more efficient and has a limited number of parameters to be tuned, making it worthwhile for real-world hyper-parameter optimization problems. We further compare our proposed HyP-ABC algorithm with state-of-the-art techniques. In order to ensure the robustness of the proposed method, the algorithm takes a wide range of feasible hyper-parameter values, and is tested using a real-world educational dataset.

Farzan Shenavarmasouleh, Farid Ghareh Mohammadi, M. Hadi Amini et al.

A smart city can be seen as a framework, comprised of Information and Communication Technologies (ICT). An intelligent network of connected devices that collect data with their sensors and transmit them using cloud technologies in order to communicate with other assets in the ecosystem plays a pivotal role in this framework. Maximizing the quality of life of citizens, making better use of resources, cutting costs, and improving sustainability are the ultimate goals that a smart city is after. Hence, data collected from connected devices will continuously get thoroughly analyzed to gain better insights into the services that are being offered across the city; with this goal in mind that they can be used to make the whole system more efficient. Robots and physical machines are inseparable parts of a smart city. Embodied AI is the field of study that takes a deeper look into these and explores how they can fit into real-world environments. It focuses on learning through interaction with the surrounding environment, as opposed to Internet AI which tries to learn from static datasets. Embodied AI aims to train an agent that can See (Computer Vision), Talk (NLP), Navigate and Interact with its environment (Reinforcement Learning), and Reason (General Intelligence), all at the same time. Autonomous driving cars and personal companions are some of the examples that benefit from Embodied AI nowadays. In this paper, we attempt to do a concise review of this field. We will go through its definitions, its characteristics, and its current achievements along with different algorithms, approaches, and solutions that are being used in different components of it (e.g. Vision, NLP, RL). We will then explore all the available simulators and 3D interactable databases that will make the research in this area feasible. Finally, we will address its challenges and identify its potentials for future research.

Farzan Shenavarmasouleh, Farid Ghareh Mohammadi, M. Hadi Amini et al.

Medical Imaging is one of the growing fields in the world of computer vision. In this study, we aim to address the Diabetic Retinopathy (DR) problem as one of the open challenges in medical imaging. In this research, we propose a new lesion detection architecture, comprising of two sub-modules, which is an optimal solution to detect and find not only the type of lesions caused by DR, their corresponding bounding boxes, and their masks; but also the severity level of the overall case. Aside from traditional accuracy, we also use two popular evaluation criteria to evaluate the outputs of our models, which are intersection over union (IOU) and mean average precision (mAP). We hypothesize that this new solution enables specialists to detect lesions with high confidence and estimate the severity of the damage with high accuracy.

Leila Zahedi, Farid Ghareh Mohammadi, Shabnam Rezapour et al.

Machine learning is a powerful method for modeling in different fields such as education. Its capability to accurately predict students' success makes it an ideal tool for decision-making tasks related to higher education. The accuracy of machine learning models depends on selecting the proper hyper-parameters. However, it is not an easy task because it requires time and expertise to tune the hyper-parameters to fit the machine learning model. In this paper, we examine the effectiveness of automated hyper-parameter tuning techniques to the realm of students' success. Therefore, we develop two automated Hyper-Parameter Optimization methods, namely grid search and random search, to assess and improve a previous study's performance. The experiment results show that applying random search and grid search on machine learning algorithms improves accuracy. We empirically show automated methods' superiority on real-world educational data (MIDFIELD) for tuning HPs of conventional machine learning classifiers. This work emphasizes the effectiveness of automated hyper-parameter optimization while applying machine learning in the education field to aid faculties, directors', or non-expert users' decisions to improve students' success.

Farid Ghareh Mohammadi, Farzan Shenavarmasouleh, M. Hadi Amini et al.

Malware detection has become a challenging task due to the increase in the number of malware families. Universal malware detection algorithms that can detect all the malware families are needed to make the whole process feasible. However, the more universal an algorithm is, the higher number of feature dimensions it needs to work with, and that inevitably causes the emerging problem of Curse of Dimensionality (CoD). Besides, it is also difficult to make this solution work due to the real-time behavior of malware analysis. In this paper, we address this problem and aim to propose a feature selection based malware detection algorithm using an evolutionary algorithm that is referred to as Artificial Bee Colony (ABC). The proposed algorithm enables researchers to decrease the feature dimension and as a result, boost the process of malware detection. The experimental results reveal that the proposed method outperforms the state-of-the-art.

Farzan Shenavarmasouleh, Farid Ghareh Mohammadi, M. Hadi Amini et al.

DRDr II is a hybrid of machine learning and deep learning worlds. It builds on the successes of its antecedent, namely, DRDr, that was trained to detect, locate, and create segmentation masks for two types of lesions (exudates and microaneurysms) that can be found in the eyes of the Diabetic Retinopathy (DR) patients; and uses the entire model as a solid feature extractor in the core of its pipeline to detect the severity level of the DR cases. We employ a big dataset with over 35 thousand fundus images collected from around the globe and after 2 phases of preprocessing alongside feature extraction, we succeed in predicting the correct severity levels with over 92% accuracy.

Ehsan Asali, Farzan Shenavarmasouleh, Farid Ghareh Mohammadi et al.

For recognizing speakers in video streams, significant research studies have been made to obtain a rich machine learning model by extracting high-level speaker's features such as facial expression, emotion, and gender. However, generating such a model is not feasible by using only single modality feature extractors that exploit either audio signals or image frames, extracted from video streams. In this paper, we address this problem from a different perspective and propose an unprecedented multimodality data fusion framework called DeepMSRF, Deep Multimodal Speaker Recognition with Feature selection. We execute DeepMSRF by feeding features of the two modalities, namely speakers' audios and face images. DeepMSRF uses a two-stream VGGNET to train on both modalities to reach a comprehensive model capable of accurately recognizing the speaker's identity. We apply DeepMSRF on a subset of VoxCeleb2 dataset with its metadata merged with VGGFace2 dataset. The goal of DeepMSRF is to identify the gender of the speaker first, and further to recognize his or her name for any given video stream. The experimental results illustrate that DeepMSRF outperforms single modality speaker recognition methods with at least 3 percent accuracy.

Farid Ghareh Mohammadi, M. Hadi Amini, Hamid R. Arabnia

Learning to learn plays a pivotal role in meta-learning (MTL) to obtain an optimal learning model. In this paper, we investigate mage recognition for unseen categories of a given dataset with limited training information. We deploy a zero-shot learning (ZSL) algorithm to achieve this goal. We also explore the effect of parameter tuning on performance of semantic auto-encoder (SAE). We further address the parameter tuning problem for meta-learning, especially focusing on zero-shot learning. By combining different embedded parameters, we improved the accuracy of tuned-SAE. Advantages and disadvantages of parameter tuning and its application in image classification are also explored.

Farid Ghareh Mohammadi, M. Hadi Amini, Hamid R. Arabnia

In [1, 2], we have explored the theoretical aspects of feature extraction optimization processes for solving largescale problems and overcoming machine learning limitations. Majority of optimization algorithms that have been introduced in [1, 2] guarantee the optimal performance of supervised learning, given offline and discrete data, to deal with curse of dimensionality (CoD) problem. These algorithms, however, are not tailored for solving emerging learning problems. One of the important issues caused by online data is lack of sufficient samples per class. Further, traditional machine learning algorithms cannot achieve accurate training based on limited distributed data, as data has proliferated and dispersed significantly. Machine learning employs a strict model or embedded engine to train and predict which still fails to learn unseen classes and sufficiently use online data. In this chapter, we introduce these challenges elaborately. We further investigate Meta-Learning (MTL) algorithm, and their application and promises to solve the emerging problems by answering how autonomous agents can learn to learn?.

Farid Ghareh Mohammadi, M. Hadi Amini, Hamid R. Arabnia

In [1], we have explored the theoretical aspects of feature selection and evolutionary algorithms. In this chapter, we focus on optimization algorithms for enhancing data analytic process, i.e., we propose to explore applications of nature-inspired algorithms in data science. Feature selection optimization is a hybrid approach leveraging feature selection techniques and evolutionary algorithms process to optimize the selected features. Prior works solve this problem iteratively to converge to an optimal feature subset. Feature selection optimization is a non-specific domain approach. Data scientists mainly attempt to find an advanced way to analyze data n with high computational efficiency and low time complexity, leading to efficient data analytics. Thus, by increasing generated/measured/sensed data from various sources, analysis, manipulation and illustration of data grow exponentially. Due to the large scale data sets, Curse of dimensionality (CoD) is one of the NP-hard problems in data science. Hence, several efforts have been focused on leveraging evolutionary algorithms (EAs) to address the complex issues in large scale data analytics problems. Dimension reduction, together with EAs, lends itself to solve CoD and solve complex problems, in terms of time complexity, efficiently. In this chapter, we first provide a brief overview of previous studies that focused on solving CoD using feature extraction optimization process. We then discuss practical examples of research studies are successfully tackled some application domains, such as image processing, sentiment analysis, network traffics / anomalies analysis, credit score analysis and other benchmark functions/data sets analysis.

Farid Ghareh Mohammadi, M. Hadi Amini, Hamid R. Arabnia

A large number of engineering, science and computational problems have yet to be solved in a computationally efficient way. One of the emerging challenges is how evolving technologies grow towards autonomy and intelligent decision making. This leads to collection of large amounts of data from various sensing and measurement technologies, e.g., cameras, smart phones, health sensors, smart electricity meters, and environment sensors. Hence, it is imperative to develop efficient algorithms for generation, analysis, classification, and illustration of data. Meanwhile, data is structured purposefully through different representations, such as large-scale networks and graphs. We focus on data science as a crucial area, specifically focusing on a curse of dimensionality (CoD) which is due to the large amount of generated/sensed/collected data. This motivates researchers to think about optimization and to apply nature-inspired algorithms, such as evolutionary algorithms (EAs) to solve optimization problems. Although these algorithms look un-deterministic, they are robust enough to reach an optimal solution. Researchers do not adopt evolutionary algorithms unless they face a problem which is suffering from placement in local optimal solution, rather than global optimal solution. In this chapter, we first develop a clear and formal definition of the CoD problem, next we focus on feature extraction techniques and categories, then we provide a general overview of meta-heuristic algorithms, its terminology, and desirable properties of evolutionary algorithms.

Farid Ghareh Mohammadi, Farzan Shenavarmasouleh, M. Hadi Amini et al.

Steganography algorithms facilitate communication between a source and a destination in a secret manner. This is done by embedding messages/text/data into images without impacting the appearance of the resultant images/videos. Steganalysis is the science of determining if an image has secret messages embedded/hidden in it. Because there are numerous steganography algorithms, and since each one of them requires a different type of steganalysis, the steganalysis process is extremely challenging. Thus, researchers aim to develop one universal steganalysis to detect all known and unknown steganography algorithms, ideally in real-time. Universal steganalysis extracts a large number of features to distinguish stego images from cover images. However, the increase in features leads to the problem of the curse of dimensionality (CoD), which is considered to be an NP-hard problem. This COD problem additionally makes real-time steganalysis hard. A large number of features generates large datasets for which machine learning cannot generate an optimal model. Generating a machine learning based model also takes a long time which makes real-time processing appear impossible in any optimization for time-intensive fields such as visual computing. Possible solutions for CoD are deep learning and evolutionary algorithms that overcome the machine learning limitations. In this study, we investigate previously developed evolutionary algorithms for boosting real-time image processing and argue that they provide the most promising solutions for the CoD problem.