Zeyu Zhang

Zeyu Zhang, Yuanshen Zhao, Jingxian Duan et al.

The diagnosis and prognosis of cancer are typically based on multi-modal clinical data, including histology images and genomic data, due to the complex pathogenesis and high heterogeneity. Despite the advancements in digital pathology and high-throughput genome sequencing, establishing effective multi-modal fusion models for survival prediction and revealing the potential association between histopathology and transcriptomics remains challenging. In this paper, we propose Pathology-Genome Heterogeneous Graph (PGHG) that integrates whole slide images (WSI) and bulk RNA-Seq expression data with heterogeneous graph neural network for cancer survival analysis. The PGHG consists of biological knowledge-guided representation learning network and pathology-genome heterogeneous graph. The representation learning network utilizes the biological prior knowledge of intra-modal and inter-modal data associations to guide the feature extraction. The node features of each modality are updated through attention-based graph learning strategy. Unimodal features and bi-modal fused features are extracted via attention pooling module and then used for survival prediction. We evaluate the model on low-grade gliomas, glioblastoma, and kidney renal papillary cell carcinoma datasets from the Cancer Genome Atlas (TCGA) and the First Affiliated Hospital of Zhengzhou University (FAHZU). Extensive experimental results demonstrate that the proposed method outperforms both unimodal and other multi-modal fusion models. For demonstrating the model interpretability, we also visualize the attention heatmap of pathological images and utilize integrated gradient algorithm to identify important tissue structure, biological pathways and key genes.

Luyu Chen, Zeyu Zhang, Haoran Tan et al.

LLMs have emerged as powerful evaluators in the LLM-as-a-Judge paradigm, offering significant efficiency and flexibility compared to human judgments. However, previous methods primarily rely on single-point evaluations, overlooking the inherent diversity and uncertainty in human evaluations. This approach leads to information loss and decreases the reliability of evaluations. To address this limitation, we propose a novel training framework that explicitly aligns the LLM-generated judgment distribution with empirical human distributions. Specifically, we propose a distributional alignment objective based on KL divergence, combined with an auxiliary cross-entropy regularization to stabilize the training process. Furthermore, considering that empirical distributions may derive from limited human annotations, we incorporate adversarial training to enhance model robustness against distribution perturbations. Extensive experiments across various LLM backbones and evaluation tasks demonstrate that our framework significantly outperforms existing closed-source LLMs and conventional single-point alignment methods, with improved alignment quality, evaluation accuracy, and robustness.