AIMay 6, 2022
Machine Learning-Friendly Biomedical Datasets for Equivalence and Subsumption Ontology MatchingYuan He, Jiaoyan Chen, Hang Dong et al. · oxford
Ontology Matching (OM) plays an important role in many domains such as bioinformatics and the Semantic Web, and its research is becoming increasingly popular, especially with the application of machine learning (ML) techniques. Although the Ontology Alignment Evaluation Initiative (OAEI) represents an impressive effort for the systematic evaluation of OM systems, it still suffers from several limitations including limited evaluation of subsumption mappings, suboptimal reference mappings, and limited support for the evaluation of ML-based systems. To tackle these limitations, we introduce five new biomedical OM tasks involving ontologies extracted from Mondo and UMLS. Each task includes both equivalence and subsumption matching; the quality of reference mappings is ensured by human curation, ontology pruning, etc.; and a comprehensive evaluation framework is proposed to measure OM performance from various perspectives for both ML-based and non-ML-based OM systems. We report evaluation results for OM systems of different types to demonstrate the usage of these resources, all of which are publicly available as part of the new BioML track at OAEI 2022.
DBJun 29, 2020
Hands-off Model Integration in Spatial Index StructuresAli Hadian, Ankit Kumar, Thomas Heinis
Spatial indexes are crucial for the analysis of the increasing amounts of spatial data, for example generated through IoT applications. The plethora of indexes that has been developed in recent decades has primarily been optimised for disk. With increasing amounts of memory even on commodity machines, however, moving them to main memory is an option. Doing so opens up the opportunity to use additional optimizations that are only amenable to main memory. In this paper we thus explore the opportunity to use light-weight machine learning models to accelerate queries on spatial indexes. We do so by exploring the potential of using interpolation and similar techniques on the R-tree, arguably the most broadly used spatial index. As we show in our experimental analysis, the query execution time can be reduced by up to 60% while simultaneously shrinking the index's memory footprint by over 90%
DBJun 29, 2020
COAX: Correlation-Aware Indexing on Multidimensional Data with Soft Functional DependenciesAli Hadian, Behzad Ghaffari, Taiyi Wang et al.
Recent work proposed learned index structures, which learn the distribution of the underlying dataset to improve performance. The initial work on learned indexes has shown that by learning the cumulative distribution function of the data, index structures such as the B-Tree can improve their performance by one order of magnitude while having a smaller memory footprint. In this paper, we present COAX, a learned index for multidimensional data that, instead of learning the distribution of keys, learns the correlations between attributes of the dataset. Our approach is driven by the observation that in many datasets, values of two (or multiple) attributes are correlated. COAX exploits these correlations to reduce the dimensionality of the datasets. More precisely, we learn how to infer one (or multiple) attribute $C_d$ from the remaining attributes and hence no longer need to index attribute $C_d$. This reduces the dimensionality and hence makes the index smaller and more efficient. We theoretically investigate the effectiveness of the proposed technique based on the predictability of the FD attributes. We further show experimentally that by predicting correlated attributes in the data, we can improve the query execution time and reduce the memory overhead of the index. In our experiments, we reduce the execution time by 25% while reducing the memory footprint of the index by four orders of magnitude.
IRMay 16, 2013
Multi-View Learning for Web Spam DetectionAli Hadian, Behrouz Minaei-Bidgoli
Spam pages are designed to maliciously appear among the top search results by excessive usage of popular terms. Therefore, spam pages should be removed using an effective and efficient spam detection system. Previous methods for web spam classification used several features from various information sources (page contents, web graph, access logs, etc.) to detect web spam. In this paper, we follow page-level classification approach to build fast and scalable spam filters. We show that each web page can be classified with satisfiable accuracy using only its own HTML content. In order to design a multi-view classification system, we used state-of-the-art spam classification methods with distinct feature sets (views) as the base classifiers. Then, a fusion model is learned to combine the output of the base classifiers and make final prediction. Results show that multi-view learning significantly improves the classification performance, namely AUC by 22%, while providing linear speedup for parallel execution.