Ulysse Côté-Allard

Elias Stenhede, Edvart Grüner Bjerke, Joanna Sulkowska et al.

We introduce Echo-POSED, a self-supervised framework for real-time transthoracic echocardiography (TTE) guidance that recommends probe adjustments directly from 2D ultrasound images, without the need for expert-labelled views or tracked probe trajectories. Instead, it trains on 2D views sliced from routinely acquired 3D echocardiography volumes, enforcing equivariance to probe motions while remaining invariant to cardiac phase, yielding a pose representation on $\mathrm{SO}(3)\times\mathrm{SO}(3)$. Across a held-out split and public external 3D--TTE datasets (including vendor shift), Echo-POSED maintains geometric consistency under virtual perturbations and enables intra- and inter-patient guidance simulations, achieving a combined mean angular error of 8.2 degrees between the guided and target views in intra-patient simulations with cardiac motion.

Knut J. Strømmen, Jim Tørresen, Ulysse Côté-Allard

The development of compact and energy-efficient wearable sensors has led to an increase in the availability of biosignals. To analyze these continuously recorded, and often multidimensional, time series at scale, being able to conduct meaningful unsupervised data segmentation is an auspicious target. A common way to achieve this is to identify change-points within the time series as the segmentation basis. However, traditional change-point detection algorithms often come with drawbacks, limiting their real-world applicability. Notably, they generally rely on the complete time series to be available and thus cannot be used for real-time applications. Another common limitation is that they poorly (or cannot) handle the segmentation of multidimensional time series. Consequently, the main contribution of this work is to propose a novel unsupervised segmentation algorithm for multidimensional time series named Latent Space Unsupervised Semantic Segmentation (LS-USS), which was designed to work easily with both online and batch data. When comparing LS-USS against other state-of-the-art change-point detection algorithms on a variety of real-world datasets, in both the offline and real-time setting, LS-USS systematically achieves on par or better performances.

Ulysse Côté-Allard, Minh H. Pham, Alexandra K. Schultz et al.

Internet-delivered psychological treatments (IDPT) are seen as an effective and scalable pathway to improving the accessibility of mental healthcare. Within this context, treatment adherence is an especially pertinent challenge to address due to the reduced interaction between healthcare professionals and patients. In parallel, the increase in regulations surrounding the use of personal data, such as the General Data Protection Regulation (GDPR), makes data minimization a core consideration for real-world implementation of IDPTs. Consequently, this work proposes a Self-Attention-based deep learning approach to perform automatic adherence forecasting, while only relying on minimally sensitive login/logout-timestamp data. This approach was tested on a dataset containing 342 patients undergoing Guided Internet-delivered Cognitive Behavioral Therapy (G-ICBT) treatment. Of these 342 patients, 101 (~30%) were considered non-adherent (dropout) based on the adherence definition used in this work (i.e. at least eight connections to the platform lasting more than a minute over 56 days). The proposed model achieved over 70% average balanced accuracy, after only 20 out of the 56 days (~1/3) of the treatment had elapsed. This study demonstrates that automatic adherence forecasting for G-ICBT, is achievable using only minimally sensitive data, thus facilitating the implementation of such tools within real-world IDPT platforms.

Abbas Tariverdi, Ulysse Côté-Allard, Kim Mathiassen et al.

This work presents a reinforcement learning-based switching control mechanism to autonomously move a ferromagnetic object (representing a milliscale robot) around obstacles within a constrained environment in the presence of disturbances. This mechanism can be used to navigate objects (e.g., capsule endoscopy, swarms of drug particles) through complex environments when active control is a necessity but where direct manipulation can be hazardous. The proposed control scheme consists of a switching control architecture implemented by two sub-controllers. The first sub-controller is designed to employ the robot's inverse kinematic solutions to do an environment search for the to-be-carried ferromagnetic particle while being robust to disturbances. The second sub-controller uses a customized rainbow algorithm to control a robotic arm, i.e., the UR5 robot, to carry a ferromagnetic particle to a desired position through a constrained environment. For the customized Rainbow algorithm, Quantile Huber loss from the Implicit Quantile Networks (IQN) algorithm and ResNet are employed. The proposed controller is first trained and tested in a real-time physics simulation engine (PyBullet). Afterward, the trained controller is transferred to a UR5 robot to remotely transport a ferromagnetic particle in a real-world scenario, achieving a 98.86% success rate over 30 episodes for randomly generated trajectories, demonstrating the viability of the proposed approach for real-life applications. In addition, two classical pathfinding approaches, Attractor Dynamics and the execution extended Rapidly-Exploring Random Trees (ERRT), are also investigated and compared to the RL-based method. The proposed RL-based algorithm is shown to achieve performance comparable to that of the tested classical path planners whilst being more robust to deploy in dynamical environments.

Ulysse Côté-Allard, Petter Jakobsen, Andrea Stautland et al.

Manic episodes of bipolar disorder can lead to uncritical behaviour and delusional psychosis, often with destructive consequences for those affected and their surroundings. Early detection and intervention of a manic episode are crucial to prevent escalation, hospital admission and premature death. However, people with bipolar disorder may not recognize that they are experiencing a manic episode and symptoms such as euphoria and increased productivity can also deter affected individuals from seeking help. This work proposes to perform user-independent, automatic mood-state detection based on actigraphy and electrodermal activity acquired from a wrist-worn device during mania and after recovery (euthymia). This paper proposes a new deep learning-based ensemble method leveraging long (20h) and short (5 minutes) time-intervals to discriminate between the mood-states. When tested on 47 bipolar patients, the proposed classification scheme achieves an average accuracy of 91.59% in euthymic/manic mood-state recognition.

Cheikh Latyr Fall, Ulysse Côté-Allard, Quentin Mascret et al.

This paper presents a control interface to translate the residual body motions of individuals living with severe disabilities, into control commands for body-machine interaction. A custom, wireless, wearable multi-sensor network is used to collect motion data from multiple points on the body in real-time. The solution proposed successfully leverage electromyography gesture recognition techniques for the recognition of inertial measurement units-based commands (IMU), without the need for cumbersome and noisy surface electrodes. Motion pattern recognition is performed using a computationally inexpensive classifier (Linear Discriminant Analysis) so that the solution can be deployed onto lightweight embedded platforms. Five participants (three able-bodied and two living with upper-body disabilities) presenting different motion limitations (e.g. spasms, reduced motion range) were recruited. They were asked to perform up to 9 different motion classes, including head, shoulder, finger, and foot motions, with respect to their residual functional capacities. The measured prediction performances show an average accuracy of 99.96% for able-bodied individuals and 91.66% for participants with upper-body disabilities. The recorded dataset has also been made available online to the research community. Proof of concept for the real-time use of the system is given through an assembly task replicating activities of daily living using the JACO arm from Kinova Robotics.

Ulysse Côté-Allard, Gabriel Gagnon-Turcotte, Angkoon Phinyomark et al.

Surface electromyography (sEMG) provides an intuitive and non-invasive interface from which to control machines. However, preserving the myoelectric control system's performance over multiple days is challenging, due to the transient nature of the signals obtained with this recording technique. In practice, if the system is to remain usable, a time-consuming and periodic recalibration is necessary. In the case where the sEMG interface is employed every few days, the user might need to do this recalibration before every use. Thus, severely limiting the practicality of such a control method. Consequently, this paper proposes tackling the especially challenging task of unsupervised adaptation of sEMG signals, when multiple days have elapsed between each recording, by introducing Self-Calibrating Asynchronous Domain Adversarial Neural Network (SCADANN). SCADANN is compared with two state-of-the-art self-calibrating algorithms developed specifically for deep learning within the context of EMG-based gesture recognition and three state-of-the-art domain adversarial algorithms. The comparison is made both on an offline and a dynamic dataset (20 participants per dataset), using two different deep network architectures with two different input modalities (temporal-spatial descriptors and spectrograms). Overall, SCADANN is shown to substantially and systematically improves classification performances over no recalibration and obtains the highest average accuracy for all tested cases across all methods.

Ulysse Côté-Allard, Gabriel Gagnon-Turcotte, Angkoon Phinyomark et al.

Within the field of electromyography-based (EMG) gesture recognition, disparities exist between the offline accuracy reported in the literature and the real-time usability of a classifier. This gap mainly stems from two factors: 1) The absence of a controller, making the data collected dissimilar to actual control. 2) The difficulty of including the four main dynamic factors (gesture intensity, limb position, electrode shift, and transient changes in the signal), as including their permutations drastically increases the amount of data to be recorded. Contrarily, online datasets are limited to the exact EMG-based controller used to record them, necessitating the recording of a new dataset for each control method or variant to be tested. Consequently, this paper proposes a new type of dataset to serve as an intermediate between offline and online datasets, by recording the data using a real-time experimental protocol. The protocol, performed in virtual reality, includes the four main dynamic factors and uses an EMG-independent controller to guide movements. This EMG-independent feedback ensures that the user is in-the-loop during recording, while enabling the resulting dynamic dataset to be used as an EMG-based benchmark. The dataset is comprised of 20 able-bodied participants completing three to four sessions over a period of 14 to 21 days. The ability of the dynamic dataset to serve as a benchmark is leveraged to evaluate the impact of different recalibration techniques for long-term (across-day) gesture recognition, including a novel algorithm, named TADANN. TADANN consistently and significantly (p<0.05) outperforms using fine-tuning as the recalibration technique.

Ulysse Côté-Allard, Evan Campbell, Angkoon Phinyomark et al.

The research in myoelectric control systems primarily focuses on extracting discriminative representations from the electromyographic (EMG) signal by designing handcrafted features. Recently, deep learning techniques have been applied to the challenging task of EMG-based gesture recognition. The adoption of these techniques slowly shifts the focus from feature engineering to feature learning. However, the black-box nature of deep learning makes it hard to understand the type of information learned by the network and how it relates to handcrafted features. Additionally, due to the high variability in EMG recordings between participants, deep features tend to generalize poorly across subjects using standard training methods. Consequently, this work introduces a new multi-domain learning algorithm, named ADANN, which significantly enhances (p=0.00004) inter-subject classification accuracy by an average of 19.40% compared to standard training. Using ADANN-generated features, the main contribution of this work is to provide the first topological data analysis of EMG-based gesture recognition for the characterisation of the information encoded within a deep network, using handcrafted features as landmarks. This analysis reveals that handcrafted features and the learned features (in the earlier layers) both try to discriminate between all gestures, but do not encode the same information to do so. Furthermore, using convolutional network visualization techniques reveal that learned features tend to ignore the most activated channel during gesture contraction, which is in stark contrast with the prevalence of handcrafted features designed to capture amplitude information. Overall, this work paves the way for hybrid feature sets by providing a clear guideline of complementary information encoded within learned and handcrafted features.

Ulysse Côté-Allard, Cheikh Latyr Fall, Alexandre Drouin et al.

In recent years, deep learning algorithms have become increasingly more prominent for their unparalleled ability to automatically learn discriminant features from large amounts of data. However, within the field of electromyography-based gesture recognition, deep learning algorithms are seldom employed as they require an unreasonable amount of effort from a single person, to generate tens of thousands of examples. This work's hypothesis is that general, informative features can be learned from the large amounts of data generated by aggregating the signals of multiple users, thus reducing the recording burden while enhancing gesture recognition. Consequently, this paper proposes applying transfer learning on aggregated data from multiple users, while leveraging the capacity of deep learning algorithms to learn discriminant features from large datasets. Two datasets comprised of 19 and 17 able-bodied participants respectively (the first one is employed for pre-training) were recorded for this work, using the Myo Armband. A third Myo Armband dataset was taken from the NinaPro database and is comprised of 10 able-bodied participants. Three different deep learning networks employing three different modalities as input (raw EMG, Spectrograms and Continuous Wavelet Transform (CWT)) are tested on the second and third dataset. The proposed transfer learning scheme is shown to systematically and significantly enhance the performance for all three networks on the two datasets, achieving an offline accuracy of 98.31% for 7 gestures over 17 participants for the CWT-based ConvNet and 68.98% for 18 gestures over 10 participants for the raw EMG-based ConvNet. Finally, a use-case study employing eight able-bodied participants suggests that real-time feedback allows users to adapt their muscle activation strategy which reduces the degradation in accuracy normally experienced over time.