William E. Higgins

2papers

2 Papers

IVJul 15, 2022
ESFPNet: efficient deep learning architecture for real-time lesion segmentation in autofluorescence bronchoscopic video

Qi Chang, Danish Ahmad, Jennifer Toth et al.

Lung cancer tends to be detected at an advanced stage, resulting in a high patient mortality rate. Thus, much recent research has focused on early disease detection Bronchoscopy is the procedure of choice for an effective noninvasive way of detecting early manifestations (bronchial lesions) of lung cancer. In particular, autofluorescence bronchoscopy (AFB) discriminates the autofluorescence properties of normal (green) and diseased tissue (reddish brown) with different colors. Because recent studies show AFB's high sensitivity in searching lesions, it has become a potentially pivotal method in bronchoscopic airway exams. Unfortunately, manual inspection of AFB video is extremely tedious and error prone, while limited effort has been expended toward potentially more robust automatic AFB lesion analysis. We propose a real-time (processing throughput of 27 frames/sec) deep-learning architecture dubbed ESFPNet for accurate segmentation and robust detection of bronchial lesions in AFB video streams. The architecture features an encoder structure that exploits pretrained Mix Transformer (MiT) encoders and an efficient stage-wise feature pyramid (ESFP) decoder structure. Segmentation results from the AFB airway-exam videos of 20 lung cancer patients indicate that our approach gives a mean Dice index = 0.756 and an average Intersection of Union = 0.624, results that are superior to those generated by other recent architectures. Thus, ESFPNet gives the physician a potential tool for confident real-time lesion segmentation and detection during a live bronchoscopic airway exam. Moreover, our model shows promising potential applicability to other domains, as evidenced by its state-of-the-art (SOTA) performance on the CVC-ClinicDB, ETIS-LaribPolypDB datasets, and superior performance on the Kvasir, CVC-ColonDB datasets.

IVMar 21, 2023
Autofluorescence Bronchoscopy Video Analysis for Lesion Frame Detection

Qi Chang, Rebecca Bascom, Jennifer Toth et al.

Because of the significance of bronchial lesions as indicators of early lung cancer and squamous cell carcinoma, a critical need exists for early detection of bronchial lesions. Autofluorescence bronchoscopy (AFB) is a primary modality used for bronchial lesion detection, as it shows high sensitivity to suspicious lesions. The physician, however, must interactively browse a long video stream to locate lesions, making the search exceedingly tedious and error prone. Unfortunately, limited research has explored the use of automated AFB video analysis for efficient lesion detection. We propose a robust automatic AFB analysis approach that distinguishes informative and uninformative AFB video frames in a video. In addition, for the informative frames, we determine the frames containing potential lesions and delineate candidate lesion regions. Our approach draws upon a combination of computer-based image analysis, machine learning, and deep learning. Thus, the analysis of an AFB video stream becomes more tractable. Tests with patient AFB video indicate that $\ge$97\% of frames were correctly labeled as informative or uninformative. In addition, $\ge$97\% of lesion frames were correctly identified, with false positive and false negative rates $\le$3\%.