Xinghao Qiao

Yirui Liu, Xinghao Qiao, Liying Wang et al.

Training deep graph neural networks (GNNs) poses a challenging task, as the performance of GNNs may suffer from the number of hidden message-passing layers. The literature has focused on the proposals of {over-smoothing} and {under-reaching} to explain the performance deterioration of deep GNNs. In this paper, we propose a new explanation for such deteriorated performance phenomenon, {mis-simplification}, that is, mistakenly simplifying graphs by preventing self-loops and forcing edges to be unweighted. We show that such simplifying can reduce the potential of message-passing layers to capture the structural information of graphs. In view of this, we propose a new framework, edge enhanced graph neural network (EEGNN). EEGNN uses the structural information extracted from the proposed Dirichlet mixture Poisson graph model (DMPGM), a Bayesian nonparametric model for graphs, to improve the performance of various deep message-passing GNNs. We propose a Markov chain Monte Carlo inference framework for DMPGM. Experiments over different datasets show that our method achieves considerable performance increase compared to baselines.

Yirui Liu, Xinghao Qiao, Yulong Pei et al.

This paper introduces the Deep Functional Factor Model (DF2M), a Bayesian nonparametric model designed for analysis of high-dimensional functional time series. DF2M is built upon the Indian Buffet Process and the multi-task Gaussian Process, incorporating a deep kernel function that captures non-Markovian and nonlinear temporal dynamics. Unlike many black-box deep learning models, DF2M offers an explainable approach to utilizing neural networks by constructing a factor model and integrating deep neural networks within the kernel function. Additionally, we develop a computationally efficient variational inference algorithm to infer DF2M. Empirical results from four real-world datasets demonstrate that DF2M provides better explainability and superior predictive accuracy compared to conventional deep learning models for high-dimensional functional time series.

Yirui Liu, Xinghao Qiao, Jessica Lam

Current variational inference methods for hierarchical Bayesian nonparametric models can neither characterize the correlation structure among latent variables due to the mean-field setting, nor infer the true posterior dimension because of the universal truncation. To overcome these limitations, we propose the conditional and adaptively truncated variational inference method (CATVI) by maximizing the nonparametric evidence lower bound and integrating Monte Carlo into the variational inference framework. CATVI enjoys several advantages over traditional methods, including a smaller divergence between variational and true posteriors, reduced risk of underfitting or overfitting, and improved prediction accuracy. Empirical studies on three large datasets reveal that CATVI applied in Bayesian nonparametric topic models substantially outperforms competing models, providing lower perplexity and clearer topic-words clustering.