Paolo Didier Alfano

Paolo Didier Alfano, Marco Rando, Marco Letizia et al.

Monitoring plankton populations in situ is fundamental to preserve the aquatic ecosystem. Plankton microorganisms are in fact susceptible of minor environmental perturbations, that can reflect into consequent morphological and dynamical modifications. Nowadays, the availability of advanced automatic or semi-automatic acquisition systems has been allowing the production of an increasingly large amount of plankton image data. The adoption of machine learning algorithms to classify such data may be affected by the significant cost of manual annotation, due to both the huge quantity of acquired data and the numerosity of plankton species. To address these challenges, we propose an efficient unsupervised learning pipeline to provide accurate classification of plankton microorganisms. We build a set of image descriptors exploiting a two-step procedure. First, a Variational Autoencoder (VAE) is trained on features extracted by a pre-trained neural network. We then use the learnt latent space as image descriptor for clustering. We compare our method with state-of-the-art unsupervised approaches, where a set of pre-defined hand-crafted features is used for clustering of plankton images. The proposed pipeline outperforms the benchmark algorithms for all the plankton datasets included in our analysis, providing better image embedding properties.

Paolo Didier Alfano, Vito Paolo Pastore, Lorenzo Rosasco et al.

The impressive performance of deep learning architectures is associated with a massive increase in model complexity. Millions of parameters need to be tuned, with training and inference time scaling accordingly, together with energy consumption. But is massive fine-tuning always necessary? In this paper, focusing on image classification, we consider a simple transfer learning approach exploiting pre-trained convolutional features as input for a fast-to-train kernel method. We refer to this approach as \textit{top-tuning} since only the kernel classifier is trained on the target dataset. In our study, we perform more than 3000 training processes focusing on 32 small to medium-sized target datasets, a typical situation where transfer learning is necessary. We show that the top-tuning approach provides comparable accuracy with respect to fine-tuning, with a training time between one and two orders of magnitude smaller. These results suggest that top-tuning is an effective alternative to fine-tuning in small/medium datasets, being especially useful when training time efficiency and computational resources saving are crucial.