LGDec 4, 2025
Explainable Graph Representation Learning via Graph Pattern AnalysisXudong Wang, Ziheng Sun, Chris Ding et al.
Explainable artificial intelligence (XAI) is an important area in the AI community, and interpretability is crucial for building robust and trustworthy AI models. While previous work has explored model-level and instance-level explainable graph learning, there has been limited investigation into explainable graph representation learning. In this paper, we focus on representation-level explainable graph learning and ask a fundamental question: What specific information about a graph is captured in graph representations? Our approach is inspired by graph kernels, which evaluate graph similarities by counting substructures within specific graph patterns. Although the pattern counting vector can serve as an explainable representation, it has limitations such as ignoring node features and being high-dimensional. To address these limitations, we introduce a framework (PXGL-GNN) for learning and explaining graph representations through graph pattern analysis. We start by sampling graph substructures of various patterns. Then, we learn the representations of these patterns and combine them using a weighted sum, where the weights indicate the importance of each graph pattern's contribution. We also provide theoretical analyses of our methods, including robustness and generalization. In our experiments, we show how to learn and explain graph representations for real-world data using pattern analysis. Additionally, we compare our method against multiple baselines in both supervised and unsupervised learning tasks to demonstrate its effectiveness.
LGNov 19, 2024
K-means Derived Unsupervised Feature Selection using Improved ADMMZiheng Sun, Chris Ding, Jicong Fan
Feature selection is important for high-dimensional data analysis and is non-trivial in unsupervised learning problems such as dimensionality reduction and clustering. The goal of unsupervised feature selection is finding a subset of features such that the data points from different clusters are well separated. This paper presents a novel method called K-means Derived Unsupervised Feature Selection (K-means UFS). Unlike most existing spectral analysis based unsupervised feature selection methods, we select features using the objective of K-means. We develop an alternating direction method of multipliers (ADMM) to solve the NP-hard optimization problem of our K-means UFS model. Extensive experiments on real datasets show that our K-means UFS is more effective than the baselines in selecting features for clustering.
LGAug 6, 2025
GraphProp: Training the Graph Foundation Models using Graph PropertiesZiheng Sun, Qi Feng, Lehao Lin et al.
This work focuses on training graph foundation models (GFMs) that have strong generalization ability in graph-level tasks such as graph classification. Effective GFM training requires capturing information consistent across different domains. We discover that graph structures provide more consistent cross-domain information compared to node features and graph labels. However, traditional GFMs primarily focus on transferring node features from various domains into a unified representation space but often lack structural cross-domain generalization. To address this, we introduce GraphProp, which emphasizes structural generalization. The training process of GraphProp consists of two main phases. First, we train a structural GFM by predicting graph invariants. Since graph invariants are properties of graphs that depend only on the abstract structure, not on particular labellings or drawings of the graph, this structural GFM has a strong ability to capture the abstract structural information and provide discriminative graph representations comparable across diverse domains. In the second phase, we use the representations given by the structural GFM as positional encodings to train a comprehensive GFM. This phase utilizes domain-specific node attributes and graph labels to further improve cross-domain node feature generalization. Our experiments demonstrate that GraphProp significantly outperforms the competitors in supervised learning and few-shot learning, especially in handling graphs without node attributes.
LGMay 27, 2025
Learnable Kernel Density Estimation for GraphsXudong Wang, Ziheng Sun, Chris Ding et al.
This work proposes a framework LGKDE that learns kernel density estimation for graphs. The key challenge in graph density estimation lies in effectively capturing both structural patterns and semantic variations while maintaining theoretical guarantees. Combining graph kernels and kernel density estimation (KDE) is a standard approach to graph density estimation, but has unsatisfactory performance due to the handcrafted and fixed features of kernels. Our method LGKDE leverages graph neural networks to represent each graph as a discrete distribution and utilizes maximum mean discrepancy to learn the graph metric for multi-scale KDE, where all parameters are learned by maximizing the density of graphs relative to the density of their well-designed perturbed counterparts. The perturbations are conducted on both node features and graph spectra, which helps better characterize the boundary of normal density regions. Theoretically, we establish consistency and convergence guarantees for LGKDE, including bounds on the mean integrated squared error, robustness, and generalization. We validate LGKDE by demonstrating its effectiveness in recovering the underlying density of synthetic graph distributions and applying it to graph anomaly detection across diverse benchmark datasets. Extensive empirical evaluation shows that LGKDE demonstrates superior performance compared to state-of-the-art baselines on most benchmark datasets.
LGDec 21, 2024
Back To The Future: A Hybrid Transformer-XGBoost Model for Action-oriented Future-proofing NowcastingZiheng Sun
Inspired by the iconic movie Back to the Future, this paper explores an innovative adaptive nowcasting approach that reimagines the relationship between present actions and future outcomes. In the movie, characters travel through time to manipulate past events, aiming to create a better future. Analogously, our framework employs predictive insights about the future to inform and adjust present conditions. This dual-stage model integrates the forecasting power of Transformers (future visionary) with the interpretability and efficiency of XGBoost (decision maker), enabling a seamless loop of future prediction and present adaptation. Through experimentation with meteorological datasets, we demonstrate the framework's advantage in achieving more accurate forecasting while guiding actionable interventions for real-time applications.