Md. Manowarul Islam

Md. Alamin Talukder, Md. Manowarul Islam, Md Ashraf Uddin et al.

Cancer is a fatal disease caused by a combination of genetic diseases and a variety of biochemical abnormalities. Lung and colon cancer have emerged as two of the leading causes of death and disability in humans. The histopathological detection of such malignancies is usually the most important component in determining the best course of action. Early detection of the ailment on either front considerably decreases the likelihood of mortality. Machine learning and deep learning techniques can be utilized to speed up such cancer detection, allowing researchers to study a large number of patients in a much shorter amount of time and at a lower cost. In this research work, we introduced a hybrid ensemble feature extraction model to efficiently identify lung and colon cancer. It integrates deep feature extraction and ensemble learning with high-performance filtering for cancer image datasets. The model is evaluated on histopathological (LC25000) lung and colon datasets. According to the study findings, our hybrid model can detect lung, colon, and (lung and colon) cancer with accuracy rates of 99.05%, 100%, and 99.30%, respectively. The study's findings show that our proposed strategy outperforms existing models significantly. Thus, these models could be applicable in clinics to support the doctor in the diagnosis of cancers.

Md. Alamin Talukder, Khondokar Fida Hasan, Md. Manowarul Islam et al.

Network intrusion detection systems (NIDSs) play an important role in computer network security. There are several detection mechanisms where anomaly-based automated detection outperforms others significantly. Amid the sophistication and growing number of attacks, dealing with large amounts of data is a recognized issue in the development of anomaly-based NIDS. However, do current models meet the needs of today's networks in terms of required accuracy and dependability? In this research, we propose a new hybrid model that combines machine learning and deep learning to increase detection rates while securing dependability. Our proposed method ensures efficient pre-processing by combining SMOTE for data balancing and XGBoost for feature selection. We compared our developed method to various machine learning and deep learning algorithms to find a more efficient algorithm to implement in the pipeline. Furthermore, we chose the most effective model for network intrusion based on a set of benchmarked performance analysis criteria. Our method produces excellent results when tested on two datasets, KDDCUP'99 and CIC-MalMem-2022, with an accuracy of 99.99% and 100% for KDDCUP'99 and CIC-MalMem-2022, respectively, and no overfitting or Type-1 and Type-2 issues.

Md. Alamin Talukder, Md. Manowarul Islam, Md Ashraf Uddin et al.

Cybersecurity has emerged as a critical global concern. Intrusion Detection Systems (IDS) play a critical role in protecting interconnected networks by detecting malicious actors and activities. Machine Learning (ML)-based behavior analysis within the IDS has considerable potential for detecting dynamic cyber threats, identifying abnormalities, and identifying malicious conduct within the network. However, as the number of data grows, dimension reduction becomes an increasingly difficult task when training ML models. Addressing this, our paper introduces a novel ML-based network intrusion detection model that uses Random Oversampling (RO) to address data imbalance and Stacking Feature Embedding based on clustering results, as well as Principal Component Analysis (PCA) for dimension reduction and is specifically designed for large and imbalanced datasets. This model's performance is carefully evaluated using three cutting-edge benchmark datasets: UNSW-NB15, CIC-IDS-2017, and CIC-IDS-2018. On the UNSW-NB15 dataset, our trials show that the RF and ET models achieve accuracy rates of 99.59% and 99.95%, respectively. Furthermore, using the CIC-IDS2017 dataset, DT, RF, and ET models reach 99.99% accuracy, while DT and RF models obtain 99.94% accuracy on CIC-IDS2018. These performance results continuously outperform the state-of-art, indicating significant progress in the field of network intrusion detection. This achievement demonstrates the efficacy of the suggested methodology, which can be used practically to accurately monitor and identify network traffic intrusions, thereby blocking possible threats.

Md. Alamin Talukder, Selina Sharmin, Md Ashraf Uddin et al.

Wireless Sensor Networks (WSNs) play a pivotal role as infrastructures, encompassing both stationary and mobile sensors. These sensors self-organize and establish multi-hop connections for communication, collectively sensing, gathering, processing, and transmitting data about their surroundings. Despite their significance, WSNs face rapid and detrimental attacks that can disrupt functionality. Existing intrusion detection methods for WSNs encounter challenges such as low detection rates, computational overhead, and false alarms. These issues stem from sensor node resource constraints, data redundancy, and high correlation within the network. To address these challenges, we propose an innovative intrusion detection approach that integrates Machine Learning (ML) techniques with the Synthetic Minority Oversampling Technique Tomek Link (SMOTE-TomekLink) algorithm. This blend synthesizes minority instances and eliminates Tomek links, resulting in a balanced dataset that significantly enhances detection accuracy in WSNs. Additionally, we incorporate feature scaling through standardization to render input features consistent and scalable, facilitating more precise training and detection. To counteract imbalanced WSN datasets, we employ the SMOTE-Tomek resampling technique, mitigating overfitting and underfitting issues. Our comprehensive evaluation, using the WSN Dataset (WSN-DS) containing 374,661 records, identifies the optimal model for intrusion detection in WSNs. The standout outcome of our research is the remarkable performance of our model. In binary, it achieves an accuracy rate of 99.78% and in multiclass, it attains an exceptional accuracy rate of 99.92%. These findings underscore the efficiency and superiority of our proposal in the context of WSN intrusion detection, showcasing its effectiveness in detecting and mitigating intrusions in WSNs.

Maksuda Akter, Rabea Khatun, Md. Alamin Talukder et al.

Skin cancer is a serious and potentially fatal disease caused by DNA damage. Early detection significantly increases survival rates, making accurate diagnosis crucial. In this groundbreaking study, we present a hybrid framework based on Deep Learning (DL) that achieves precise classification of benign and malignant skin lesions. Our approach begins with dataset preprocessing to enhance classification accuracy, followed by training two separate pre-trained DL models, InceptionV3 and DenseNet121. By fusing the results of each model using the weighted sum rule, our system achieves exceptional accuracy rates. Specifically, we achieve a 92.27% detection accuracy rate, 92.33% sensitivity, 92.22% specificity, 90.81% precision, and 91.57% F1-score, outperforming existing models and demonstrating the robustness and trustworthiness of our hybrid approach. Our study represents a significant advance in skin cancer diagnosis and provides a promising foundation for further research in the field. With the potential to save countless lives through earlier detection, our hybrid deep-learning approach is a game-changer in the fight against skin cancer.

Maleka Khatun, Md Manowarul Islam, Habibur Rahman Rifat et al.

Brain-related diseases are more sensitive than other diseases due to several factors, including the complexity of surgical procedures, high costs, and other challenges. Alzheimer's disease is a common brain disorder that causes memory loss and the shrinking of brain cells. Early detection is critical for providing proper treatment to patients. However, identifying Alzheimer's at an early stage using manual scanning of CT or MRI scans is challenging. Therefore, researchers have delved into the exploration of computer-aided systems, employing Machine Learning and Deep Learning methodologies, which entail the training of datasets to detect Alzheimer's disease. This study aims to present a hybrid model that combines a CNN model's feature extraction capabilities with an LSTM model's detection capabilities. This study has applied the transfer learning called VGG16 in the hybrid model to extract features from MRI images. The LSTM detects features between the convolution layer and the fully connected layer. The output layer of the fully connected layer uses the softmax function. The training of the hybrid model involved utilizing the ADNI dataset. The trial findings revealed that the model achieved a level of accuracy of 98.8%, a sensitivity rate of 100%, and a specificity rate of 76%. The proposed hybrid model outperforms its contemporary CNN counterparts, showcasing a superior performance.

Abanti Bhattacharjya, Md Manowarul Islam, Md Ashraf Uddin et al.

With the advent of Information technology, the Bioinformatics research field is becoming increasingly attractive to researchers and academicians. The recent development of various Bioinformatics toolkits has facilitated the rapid processing and analysis of vast quantities of biological data for human perception. Most studies focus on locating two connected diseases and making some observations to construct diverse gene regulatory interaction networks, a forerunner to general drug design for curing illness. For instance, Hypopharyngeal cancer is a disease that is associated with EGFR-mutated lung adenocarcinoma. In this study, we select EGFR-mutated lung adenocarcinoma and Hypopharyngeal cancer by finding the Lung metastases in hypopharyngeal cancer. To conduct this study, we collect Mircorarray datasets from GEO (Gene Expression Omnibus), an online database controlled by NCBI. Differentially expressed genes, common genes, and hub genes between the selected two diseases are detected for the succeeding move. Our research findings have suggested common therapeutic molecules for the selected diseases based on 10 hub genes with the highest interactions according to the degree topology method and the maximum clique centrality (MCC). Our suggested therapeutic molecules will be fruitful for patients with those two diseases simultaneously.

Maksuda Akter, Rabea Khatun, Md Manowarul Islam

Acute lymphoblastic leukemia (ALL) is the most malignant form of leukemia and the most common cancer in adults and children. Traditionally, leukemia is diagnosed by analyzing blood and bone marrow smears under a microscope, with additional cytochemical tests for confirmation. However, these methods are expensive, time consuming, and highly dependent on expert knowledge. In recent years, deep learning, particularly Convolutional Neural Networks (CNNs), has provided advanced methods for classifying microscopic smear images, aiding in the detection of leukemic cells. These approaches are quick, cost effective, and not subject to human bias. However, most methods lack the ability to quantify uncertainty, which could lead to critical misdiagnoses. In this research, hybrid deep learning models (InceptionV3-GRU, EfficientNetB3-GRU, MobileNetV2-GRU) were implemented to classify ALL. Bayesian optimization was used to fine tune the model's hyperparameters and improve its performance. Additionally, Deep Ensemble uncertainty quantification was applied to address uncertainty during leukemia image classification. The proposed models were trained on the publicly available datasets ALL-IDB1 and ALL-IDB2. Their results were then aggregated at the score level using the sum rule. The parallel architecture used in these models offers a high level of confidence in differentiating between ALL and non-ALL cases. The proposed method achieved a remarkable detection accuracy rate of 100% on the ALL-IDB1 dataset, 98.07% on the ALL-IDB2 dataset, and 98.64% on the combined dataset, demonstrating its potential for accurate and reliable leukemia diagnosis.

Rabea Khatun, Wahia Tasnim, Maksuda Akter et al.

Gallbladder cancer (GBC) is the most frequent cause of disease among biliary tract neoplasms. Identifying the molecular mechanisms and biomarkers linked to GBC progression has been a significant challenge in scientific research. Few recent studies have explored the roles of biomarkers in GBC. Our study aimed to identify biomarkers in GBC using machine learning (ML) and bioinformatics techniques. We compared GBC tumor samples with normal samples to identify differentially expressed genes (DEGs) from two microarray datasets (GSE100363, GSE139682) obtained from the NCBI GEO database. A total of 146 DEGs were found, with 39 up-regulated and 107 down-regulated genes. Functional enrichment analysis of these DEGs was performed using Gene Ontology (GO) terms and REACTOME pathways through DAVID. The protein-protein interaction network was constructed using the STRING database. To identify hub genes, we applied three ranking algorithms: Degree, MNC, and Closeness Centrality. The intersection of hub genes from these algorithms yielded 11 hub genes. Simultaneously, two feature selection methods (Pearson correlation and recursive feature elimination) were used to identify significant gene subsets. We then developed ML models using SVM and RF on the GSE100363 dataset, with validation on GSE139682, to determine the gene subset that best distinguishes GBC samples. The hub genes outperformed the other gene subsets. Finally, NTRK2, COL14A1, SCN4B, ATP1A2, SLC17A7, SLIT3, COL7A1, CLDN4, CLEC3B, ADCYAP1R1, and MFAP4 were identified as crucial genes, with SLIT3, COL7A1, and CLDN4 being strongly linked to GBC development and prediction.

Md. Alamin Talukder, Md. Manowarul Islam, Md Ashraf Uddin

Brain tumors present a grave risk to human life, demanding precise and timely diagnosis for effective treatment. Inaccurate identification of brain tumors can significantly diminish life expectancy, underscoring the critical need for precise diagnostic methods. Manual identification of brain tumors within vast Magnetic Resonance Imaging (MRI) image datasets is arduous and time-consuming. Thus, the development of a reliable deep learning (DL) model is essential to enhance diagnostic accuracy and ultimately save lives. This study introduces an innovative optimization-based deep ensemble approach employing transfer learning (TL) to efficiently classify brain tumors. Our methodology includes meticulous preprocessing, reconstruction of TL architectures, fine-tuning, and ensemble DL models utilizing weighted optimization techniques such as Genetic Algorithm-based Weight Optimization (GAWO) and Grid Search-based Weight Optimization (GSWO). Experimentation is conducted on the Figshare Contrast-Enhanced MRI (CE-MRI) brain tumor dataset, comprising 3064 images. Our approach achieves notable accuracy scores, with Xception, ResNet50V2, ResNet152V2, InceptionResNetV2, GAWO, and GSWO attaining 99.42%, 98.37%, 98.22%, 98.26%, 99.71%, and 99.76% accuracy, respectively. Notably, GSWO demonstrates superior accuracy, averaging 99.76\% accuracy across five folds on the Figshare CE-MRI brain tumor dataset. The comparative analysis highlights the significant performance enhancement of our proposed model over existing counterparts. In conclusion, our optimized deep ensemble model exhibits exceptional accuracy in swiftly classifying brain tumors. Furthermore, it has the potential to assist neurologists and clinicians in making accurate and immediate diagnostic decisions.