Eben Holderness

Jingxuan Tu, Kyeongmin Rim, Eben Holderness et al.

Understanding inferences and answering questions from text requires more than merely recovering surface arguments, adjuncts, or strings associated with the query terms. As humans, we interpret sentences as contextualized components of a narrative or discourse, by both filling in missing information, and reasoning about event consequences. In this paper, we define the process of rewriting a textual expression (lexeme or phrase) such that it reduces ambiguity while also making explicit the underlying semantics that is not (necessarily) expressed in the economy of sentence structure as Dense Paraphrasing (DP). We build the first complete DP dataset, provide the scope and design of the annotation task, and present results demonstrating how this DP process can enrich a source text to improve inferencing and QA task performance. The data and the source code will be publicly available.

James Pustejovsky, Eben Holderness, Jingxuan Tu et al.

In this paper, we argue that the design and development of multimodal datasets for natural language processing (NLP) challenges should be enhanced in two significant respects: to more broadly represent commonsense semantic inferences; and to better reflect the dynamics of actions and events, through a substantive alignment of textual and visual information. We identify challenges and tasks that are reflective of linguistic and cognitive competencies that humans have when speaking and reasoning, rather than merely the performance of systems on isolated tasks. We introduce the distinction between challenge-based tasks and competence-based performance, and describe a diagnostic dataset, Recipe-to-Video Questions (R2VQ), designed for testing competence-based comprehension over a multimodal recipe collection (http://r2vq.org/). The corpus contains detailed annotation supporting such inferencing tasks and facilitating a rich set of question families that we use to evaluate NLP systems.

Elena Alvarez-Mellado, Eben Holderness, Nicholas Miller et al.

Predicting which patients are more likely to be readmitted to a hospital within 30 days after discharge is a valuable piece of information in clinical decision-making. Building a successful readmission risk classifier based on the content of Electronic Health Records (EHRs) has proved, however, to be a challenging task. Previously explored features include mainly structured information, such as sociodemographic data, comorbidity codes and physiological variables. In this paper we assess incorporating additional clinically interpretable NLP-based features such as topic extraction and clinical sentiment analysis to predict early readmission risk in psychiatry patients.

Eben Holderness, Philip Cawkwell, Kirsten Bolton et al.

Recently natural language processing (NLP) tools have been developed to identify and extract salient risk indicators in electronic health records (EHRs). Sentiment analysis, although widely used in non-medical areas for improving decision making, has been studied minimally in the clinical setting. In this study, we undertook, to our knowledge, the first domain adaptation of sentiment analysis to psychiatric EHRs by defining psychiatric clinical sentiment, performing an annotation project, and evaluating multiple sentence-level sentiment machine learning (ML) models. Results indicate that off-the-shelf sentiment analysis tools fail in identifying clinically positive or negative polarity, and that the definition of clinical sentiment that we provide is learnable with relatively small amounts of training data. This project is an initial step towards further refining sentiment analysis methods for clinical use. Our long-term objective is to incorporate the results of this project as part of a machine learning model that predicts inpatient readmission risk. We hope that this work will initiate a discussion concerning domain adaptation of sentiment analysis to the clinical setting.

Eben Holderness, Nicholas Miller, Philip Cawkwell et al.

Readmission after discharge from a hospital is disruptive and costly, regardless of the reason. However, it can be particularly problematic for psychiatric patients, so predicting which patients may be readmitted is critically important but also very difficult. Clinical narratives in psychiatric electronic health records (EHRs) span a wide range of topics and vocabulary; therefore, a psychiatric readmission prediction model must begin with a robust and interpretable topic extraction component. We created a data pipeline for using document vector similarity metrics to perform topic extraction on psychiatric EHR data in service of our long-term goal of creating a readmission risk classifier. We show initial results for our topic extraction model and identify additional features we will be incorporating in the future.