Flaviane Romani Fernandes Svartman

2papers

2 Papers

SDJul 30, 2024
Contrasting Deep Learning Models for Direct Respiratory Insufficiency Detection Versus Blood Oxygen Saturation Estimation

Marcelo Matheus Gauy, Natalia Hitomi Koza, Ricardo Mikio Morita et al.

We contrast high effectiveness of state of the art deep learning architectures designed for general audio classification tasks, refined for respiratory insufficiency (RI) detection and blood oxygen saturation (SpO$_2$) estimation and classification through automated audio analysis. Recently, multiple deep learning architectures have been proposed to detect RI in COVID patients through audio analysis, achieving accuracy above 95% and F1-score above 0.93. RI is a condition associated with low SpO$_2$ levels, commonly defined as the threshold SpO$_2$ <92%. While SpO$_2$ serves as a crucial determinant of RI, a medical doctor's diagnosis typically relies on multiple factors. These include respiratory frequency, heart rate, SpO$_2$ levels, among others. Here we study pretrained audio neural networks (CNN6, CNN10 and CNN14) and the Masked Autoencoder (Audio-MAE) for RI detection, where these models achieve near perfect accuracy, surpassing previous results. Yet, for the regression task of estimating SpO$_2$ levels, the models achieve root mean square error values exceeding the accepted clinical range of 3.5% for finger oximeters. Additionally, Pearson correlation coefficients fail to surpass 0.3. As deep learning models perform better in classification than regression, we transform SpO$_2$-regression into a SpO$_2$-threshold binary classification problem, with a threshold of 92%. However, this task still yields an F1-score below 0.65. Thus, audio analysis offers valuable insights into a patient's RI status, but does not provide accurate information about actual SpO$_2$ levels, indicating a separation of domains in which voice and speech biomarkers may and may not be useful in medical diagnostics under current technologies.

CLOct 14, 2022Code
Bringing NURC/SP to Digital Life: the Role of Open-source Automatic Speech Recognition Models

Lucas Rafael Stefanel Gris, Arnaldo Candido Junior, Vinícius G. dos Santos et al.

The NURC Project that started in 1969 to study the cultured linguistic urban norm spoken in five Brazilian capitals, was responsible for compiling a large corpus for each capital. The digitized NURC/SP comprises 375 inquiries in 334 hours of recordings taken in São Paulo capital. Although 47 inquiries have transcripts, there was no alignment between the audio-transcription, and 328 inquiries were not transcribed. This article presents an evaluation and error analysis of three automatic speech recognition models trained with spontaneous speech in Portuguese and one model trained with prepared speech. The evaluation allowed us to choose the best model, using WER and CER metrics, in a manually aligned sample of NURC/SP, to automatically transcribe 284 hours.