Efficient MedSAMs: Segment Anything in Medical Images on LaptopJun Ma, Feifei Li, Sumin Kim et al.
Promptable segmentation foundation models have emerged as a transformative approach to addressing the diverse needs in medical images, but most existing models require expensive computing, posing a big barrier to their adoption in clinical practice. In this work, we organized the first international competition dedicated to promptable medical image segmentation, featuring a large-scale dataset spanning nine common imaging modalities from over 20 different institutions. The top teams developed lightweight segmentation foundation models and implemented an efficient inference pipeline that substantially reduced computational requirements while maintaining state-of-the-art segmentation accuracy. Moreover, the post-challenge phase advanced the algorithms through the design of performance booster and reproducibility tasks, resulting in improved algorithms and validated reproducibility of the winning solution. Furthermore, the best-performing algorithms have been incorporated into the open-source software with a user-friendly interface to facilitate clinical adoption. The data and code are publicly available to foster the further development of medical image segmentation foundation models and pave the way for impactful real-world applications.
2.0CVOct 20, 2024
Taming Mambas for Voxel Level 3D Medical Image SegmentationLuca Lumetti, Vittorio Pipoli, Kevin Marchesini et al.
Recently, the field of 3D medical segmentation has been dominated by deep learning models employing Convolutional Neural Networks (CNNs) and Transformer-based architectures, each with their distinctive strengths and limitations. CNNs are constrained by a local receptive field, whereas transformers are hindered by their substantial memory requirements as well as they data hungriness, making them not ideal for processing 3D medical volumes at a fine-grained level. For these reasons, fully convolutional neural networks, as nnUNet, still dominate the scene when segmenting medical structures in 3D large medical volumes. Despite numerous advancements towards developing transformer variants with subquadratic time and memory complexity, these models still fall short in content-based reasoning. A recent breakthrough is Mamba, a Recurrent Neural Network (RNN) based on State Space Models (SSMs) outperforming Transformers in many long-context tasks (million-length sequences) on famous natural language processing and genomic benchmarks while keeping a linear complexity.
5.3CVOct 5, 2016
Recognizing and Presenting the Storytelling Video Structure with Deep Multimodal NetworksLorenzo Baraldi, Costantino Grana, Rita Cucchiara
This paper presents a novel approach for temporal and semantic segmentation of edited videos into meaningful segments, from the point of view of the storytelling structure. The objective is to decompose a long video into more manageable sequences, which can in turn be used to retrieve the most significant parts of it given a textual query and to provide an effective summarization. Previous video decomposition methods mainly employed perceptual cues, tackling the problem either as a story change detection, or as a similarity grouping task, and the lack of semantics limited their ability to identify story boundaries. Our proposal connects together perceptual, audio and semantic cues in a specialized deep network architecture designed with a combination of CNNs which generate an appropriate embedding, and clusters shots into connected sequences of semantic scenes, i.e. stories. A retrieval presentation strategy is also proposed, by selecting the semantically and aesthetically "most valuable" thumbnails to present, considering the query in order to improve the storytelling presentation. Finally, the subjective nature of the task is considered, by conducting experiments with different annotators and by proposing an algorithm to maximize the agreement between automatic results and human annotators.