Thomas Kluge

2papers

2 Papers

LGOct 4, 2022
Amortized Bayesian Inference of GISAXS Data with Normalizing Flows

Maksim Zhdanov, Lisa Randolph, Thomas Kluge et al.

Grazing-Incidence Small-Angle X-ray Scattering (GISAXS) is a modern imaging technique used in material research to study nanoscale materials. Reconstruction of the parameters of an imaged object imposes an ill-posed inverse problem that is further complicated when only an in-plane GISAXS signal is available. Traditionally used inference algorithms such as Approximate Bayesian Computation (ABC) rely on computationally expensive scattering simulation software, rendering analysis highly time-consuming. We propose a simulation-based framework that combines variational auto-encoders and normalizing flows to estimate the posterior distribution of object parameters given its GISAXS data. We apply the inference pipeline to experimental data and demonstrate that our method reduces the inference cost by orders of magnitude while producing consistent results with ABC.

PLOct 16, 2021
Challenges Porting a C++ Template-Metaprogramming Abstraction Layer to Directive-based Offloading

Jeffrey Kelling, Sergei Bastrakov, Alexander Debus et al.

HPC systems employ a growing variety of compute accelerators with different architectures and from different vendors. Large scientific applications are required to run efficiently across these systems but need to retain a single code-base in order to not stifle development. Directive-based offloading programming models set out to provide the required portability, but, to existing codes, they themselves represent yet another API to port to. Here, we present our approach of porting the GPU-accelerated particle-in-cell code PIConGPU to OpenACC and OpenMP target by adding two new backends to its existing C++-template metaprogramming-based offloading abstraction layer alpaka and avoiding other modifications to the application code. We introduce our approach in the face of conflicts between requirements and available features in the standards as well as practical hurdles posed by immature compiler support.