Gyumin Lee

Jaehoon Lee, Chan Kim, Gyumin Lee et al.

Forecasting future outcomes from recent time series data is not easy, especially when the future data are different from the past (i.e. time series are under temporal drifts). Existing approaches show limited performances under data drifts, and we identify the main reason: It takes time for a model to collect sufficient training data and adjust its parameters for complicated temporal patterns whenever the underlying dynamics change. To address this issue, we study a new approach; instead of adjusting model parameters (by continuously re-training a model on new data), we build a hypernetwork that generates other target models' parameters expected to perform well on the future data. Therefore, we can adjust the model parameters beforehand (if the hypernetwork is correct). We conduct extensive experiments with 6 target models, 6 baselines, and 4 datasets, and show that our HyperGPA outperforms other baselines.

Changhun Lee, Gyumin Lee

Generating as diverse molecules as possible with desired properties is crucial for drug discovery research, which invokes many approaches based on deep generative models today. Despite recent advancements in these models, particularly in variational autoencoders (VAEs), generative adversarial networks (GANs), Transformers, and diffusion models, a significant challenge known as \textit{the sample bias problem} remains. This problem occurs when generated molecules targeting the same protein tend to be structurally similar, reducing the diversity of generation. To address this, we propose leveraging multi-hop relationships among proteins and compounds. Our model, Repurformer, integrates bi-directional pretraining with Fast Fourier Transform (FFT) and low-pass filtering (LPF) to capture complex interactions and generate diverse molecules. A series of experiments on BindingDB dataset confirm that Repurformer successfully creates substitutes for anchor compounds that resemble positive compounds, increasing diversity between the anchor and generated compounds.

Gyumin Lee, Shubhanshu Shekhar, Ilmun Kim

We consider the problem of two-sample testing in a semi-supervised setting with abundant unlabeled covariate data. Standard two-sample tests neglect covariate information, which has the potential to significantly boost performance. However, incorporating covariates potentially breaks the exchangeability assumption under the null, which further complicates a calibration procedure. To address these issues, we propose a semi-supervised method that produces a test statistic with asymptotic normality, while effectively integrating additional information from covariates. Our test is straightforward to calibrate due to the asymptotic normality under the null and achieves asymptotic power that is often much higher than existing kernel tests without covariates. Furthermore, we formally show that the proposed method is consistent in power against fixed and local alternatives. Simulations confirm the practical and theoretical strengths of our approach.