Can Yang

Fengtao Zhou, Yingxue Xu, Zhengyu Zhang et al.

Comprehensive molecular profiling is essential for modern precision oncology but remains hindered by prohibitive costs, specimen exhaustion, and protracted turnaround times. While pathology foundation models (PFMs) have demonstrated potential for inferring molecular phenotypes from routine hematoxylin and eosin (H&E) whole-slide images (WSIs), current architectures primarily rely on vision-centric self-supervised learning or vision-language alignment, lacking the spatially resolved molecular supervision required to connect subtle morphological features with underlying genomic alterations. Spatial transcriptomics (ST) emerges as a transformative technology that enables transcriptomic quantification within intact tissue sections, thereby preserving the precise spatial link between histology and molecular profiles. In this study, we present a Spatial Transcriptomics-guided Alignment framework for Molecular Profiling (STAMP), which endows PFMs with intrinsic molecular awareness. To support this paradigm, we curated HumanST-1k, a human ST dataset spanning diverse anatomical organs and sequencing platforms. This atlas yields 1.8 million pairs of H&E patches and corresponding transcriptomic profiles, providing a corpus that links histological structures with their molecular states. To mitigate the technical noise inherent to raw transcriptomics, STAMP applies a pathway-informed alignment strategy that aggregates transcriptomic data into biologically functional pathways, which are subsequently integrated into PFMs via parameter-efficient fine-tuning. This alignment enriches the representation space of PFMs and unlocks their capacity to resolve sub-visual molecular signatures. The clinical utility of these augmented representations was validated through a multi-tier evaluation framework.

Zhiwei Wang, Fa Zhang, Cong Zheng et al.

In various practical situations, matrix factorization methods suffer from poor data quality, such as high data sparsity and low signal-to-noise ratio (SNR). Here, we consider a matrix factorization problem by utilizing auxiliary information, which is massively available in real-world applications, to overcome the challenges caused by poor data quality. Unlike existing methods that mainly rely on simple linear models to combine auxiliary information with the main data matrix, we propose to integrate gradient boosted trees in the probabilistic matrix factorization framework to effectively leverage auxiliary information (MFAI). Thus, MFAI naturally inherits several salient features of gradient boosted trees, such as the capability of flexibly modeling nonlinear relationships and robustness to irrelevant features and missing values in auxiliary information. The parameters in MFAI can be automatically determined under the empirical Bayes framework, making it adaptive to the utilization of auxiliary information and immune to overfitting. Moreover, MFAI is computationally efficient and scalable to large datasets by exploiting variational inference. We demonstrate the advantages of MFAI through comprehensive numerical results from simulation studies and real data analyses. Our approach is implemented in the R package mfair available at https://github.com/YangLabHKUST/mfair.

Can Yang, Zhenzhong Wang, Junyuan Liu et al.

Accurate and efficient simulations of physical phenomena governed by partial differential equations (PDEs) are important for scientific and engineering progress. While traditional numerical solvers are powerful, they are often computationally expensive. Recently, data-driven methods have emerged as alternatives, but they frequently suffer from error accumulation and limited physical consistency, especially in multiphysics and complex geometries. To address these challenges, we propose PEGNet, a Physics-Embedded Graph Network that incorporates PDE-guided message passing to redesign the graph neural network architecture. By embedding key PDE dynamics like convection, viscosity, and diffusion into distinct message functions, the model naturally integrates physical constraints into its forward propagation, producing more stable and physically consistent solutions. Additionally, a hierarchical architecture is employed to capture multi-scale features, and physical regularization is integrated into the loss function to further enforce adherence to governing physics. We evaluated PEGNet on benchmarks, including custom datasets for respiratory airflow and drug delivery, showing significant improvements in long-term prediction accuracy and physical consistency over existing methods. Our code is available at https://github.com/Yanghuoshan/PEGNet.

Xin Xu, Clive Bai, Kai Yang et al.

Large-scale verifiable prompts underpin the success of Reinforcement Learning with Verifiable Rewards (RLVR), but they contain many uninformative examples and are costly to expand further. Recent studies focus on better exploiting limited training data by prioritizing hard prompts whose rollout pass rate is 0. However, easy prompts with a pass rate of 1 also become increasingly prevalent as training progresses, thereby reducing the effective data size. To mitigate this, we propose Composition-RL, a simple yet useful approach for better utilizing limited verifiable prompts targeting pass-rate-1 prompts. More specifically, Composition-RL automatically composes multiple problems into a new verifiable question and uses these compositional prompts for RL training. Extensive experiments across model sizes from 4B to 30B show that Composition-RL consistently improves reasoning capability over RL trained on the original dataset. Performance can be further boosted with a curriculum variant of Composition-RL that gradually increases compositional depth over training. Additionally, Composition-RL enables more effective cross-domain RL by composing prompts drawn from different domains. Codes, datasets, and models are available at https://github.com/XinXU-USTC/Composition-RL.

Xin Xu, Tong Xiao, Zitong Chao et al.

Math Word Problems (MWPs) play a vital role in assessing the capabilities of Large Language Models (LLMs), yet current research primarily focuses on questions with concise contexts. The impact of longer contexts on mathematical reasoning remains under-explored. This study pioneers the investigation of Context Length Generalizability (CoLeG), which refers to the ability of LLMs to solve MWPs with extended narratives. We introduce Extended Grade-School Math (E-GSM), a collection of MWPs featuring lengthy narratives, and propose two novel metrics to evaluate the efficacy and resilience of LLMs in tackling these problems. Our analysis of existing zero-shot prompting techniques with proprietary LLMs along with open-source LLMs reveals a general deficiency in CoLeG. To alleviate these issues, we propose tailored approaches for different categories of LLMs. For proprietary LLMs, we introduce a new instructional prompt designed to mitigate the impact of long contexts. For open-source LLMs, we develop a novel auxiliary task for fine-tuning to enhance CoLeG. Our comprehensive results demonstrate the effectiveness of our proposed methods, showing improved performance on E-GSM. Additionally, we conduct an in-depth analysis to differentiate the effects of semantic understanding and reasoning efficacy, showing that our methods improves the latter. We also establish the generalizability of our methods across several other MWP benchmarks. Our findings highlight the limitations of current LLMs and offer practical solutions correspondingly, paving the way for further exploration of model generalizability and training methodologies.

Xin Xu, Qiyun Xu, Tong Xiao et al.

Large language models (LLMs) have demonstrated remarkable capabilities in solving complex reasoning tasks, particularly in mathematics. However, the domain of physics reasoning presents unique challenges that have received significantly less attention. Existing benchmarks often fall short in evaluating LLMs' abilities on the breadth and depth of undergraduate-level physics, underscoring the need for a comprehensive evaluation. To fill this gap, we introduce UGPhysics, a large-scale and comprehensive benchmark specifically designed to evaluate UnderGraduate-level Physics (UGPhysics) reasoning with LLMs. UGPhysics includes 5,520 undergraduate-level physics problems in both English and Chinese, covering 13 subjects with seven different answer types and four distinct physics reasoning skills, all rigorously screened for data leakage. Additionally, we develop a Model-Assistant Rule-based Judgment (MARJ) pipeline specifically tailored for assessing answer correctness of physics problems, ensuring accurate evaluation. Our evaluation of 31 leading LLMs shows that the highest overall accuracy, 49.8% (achieved by OpenAI-o1-mini), emphasizes the necessity for models with stronger physics reasoning skills, beyond math abilities. We hope UGPhysics, along with MARJ, will drive future advancements in AI for physics reasoning. Codes and data are available at https://github.com/YangLabHKUST/UGPhysics .

Xin Xu, Jiaxin Zhang, Tianhao Chen et al.

Large Language Models (LLMs) have made significant strides in mathematical reasoning, underscoring the need for a comprehensive and fair evaluation of their capabilities. However, existing benchmarks often fall short, either lacking extensive coverage of undergraduate-level mathematical problems or probably suffering from test-set contamination. To address these issues, we introduce UGMathBench, a diverse and dynamic benchmark specifically designed for evaluating undergraduate-level mathematical reasoning with LLMs. UGMathBench comprises 5,062 problems across 16 subjects and 111 topics, featuring 10 distinct answer types. Each problem includes three randomized versions, with additional versions planned for release as leading open-source LLMs become saturated in UGMathBench. Furthermore, we propose two key metrics: effective accuracy (EAcc), which measures the percentage of correctly solved problems across all three versions, and reasoning gap ($Δ$), which assesses reasoning robustness by calculating the difference between the average accuracy across all versions and EAcc. Our extensive evaluation of 23 leading LLMs reveals that the highest EAcc achieved is 56.3\% by OpenAI-o1-mini, with large $Δ$ values observed across different models. This highlights the need for future research aimed at developing "large reasoning models" with high EAcc and $Δ= 0$. We anticipate that the release of UGMathBench, along with its detailed evaluation codes, will serve as a valuable resource to advance the development of LLMs in solving mathematical problems. Codes and data are available at https://github.com/YangLabHKUST/UGMathBench

Qing Shuai, Zhiyuan Yu, Zhize Zhou et al.

This paper addresses the challenging task of reconstructing the poses of multiple individuals engaged in close interactions, captured by multiple calibrated cameras. The difficulty arises from the noisy or false 2D keypoint detections due to inter-person occlusion, the heavy ambiguity in associating keypoints to individuals due to the close interactions, and the scarcity of training data as collecting and annotating motion data in crowded scenes is resource-intensive. We introduce a novel system to address these challenges. Our system integrates a learning-based pose estimation component and its corresponding training and inference strategies. The pose estimation component takes multi-view 2D keypoint heatmaps as input and reconstructs the pose of each individual using a 3D conditional volumetric network. As the network doesn't need images as input, we can leverage known camera parameters from test scenes and a large quantity of existing motion capture data to synthesize massive training data that mimics the real data distribution in test scenes. Extensive experiments demonstrate that our approach significantly surpasses previous approaches in terms of pose accuracy and is generalizable across various camera setups and population sizes. The code is available on our project page: https://github.com/zju3dv/CloseMoCap.

Andong Tan, Shuyu Dai, Jinglu Wang et al.

Clinical practice guidelines (CPGs) play a pivotal role in ensuring evidence-based decision-making and improving patient outcomes. While Large Language Models (LLMs) are increasingly deployed in healthcare scenarios, it is unclear to which extend LLMs could identify and adhere to CPGs during conversations. To address this gap, we introduce CPGBench, an automated framework benchmarking the clinical guideline detection and adherence capabilities of LLMs in multi-turn conversations. We collect 3,418 CPG documents from 9 countries/regions and 2 international organizations published in the last decade spanning across 24 specialties. From these documents, we extract 32,155 clinical recommendations with corresponding publication institute, date, country, specialty, recommendation strength, evidence level, etc. One multi-turn conversation is generated for each recommendation accordingly to evaluate the detection and adherence capabilities of 8 leading LLMs. We find that the 71.1%-89.6% recommendations can be correctly detected, while only 3.6%-29.7% corresponding titles can be correctly referenced, revealing the gap between knowing the guideline contents and where they come from. The adherence rates range from 21.8% to 63.2% in different models, indicating a large gap between knowing the guidelines and being able to apply them. To confirm the validity of our automatic analysis, we further conduct a comprehensive human evaluation involving 56 clinicians from different specialties. To our knowledge, CPGBench is the first benchmark systematically revealing which clinical recommendations LLMs fail to detect or adhere to during conversations. Given that each clinical recommendation may affect a large population and that clinical applications are inherently safety critical, addressing these gaps is crucial for the safe and responsible deployment of LLMs in real world clinical practice.

Yingxue Xu, Fengtao Zhou, Chenyu Zhao et al.

The integration of multimodal data including pathology images and gene profiles is widely applied in precise survival prediction. Despite recent advances in multimodal survival models, collecting complete modalities for multimodal fusion still poses a significant challenge, hindering their application in clinical settings. Current approaches tackling incomplete modalities often fall short, as they typically compensate for only a limited part of the knowledge of missing modalities. To address this issue, we propose a Distilled Prompt Learning framework (DisPro) to utilize the strong robustness of Large Language Models (LLMs) to missing modalities, which employs two-stage prompting for compensation of comprehensive information for missing modalities. In the first stage, Unimodal Prompting (UniPro) distills the knowledge distribution of each modality, preparing for supplementing modality-specific knowledge of the missing modality in the subsequent stage. In the second stage, Multimodal Prompting (MultiPro) leverages available modalities as prompts for LLMs to infer the missing modality, which provides modality-common information. Simultaneously, the unimodal knowledge acquired in the first stage is injected into multimodal inference to compensate for the modality-specific knowledge of the missing modality. Extensive experiments covering various missing scenarios demonstrated the superiority of the proposed method. The code is available at https://github.com/Innse/DisPro.

Kaidong Wang, Yao Wang, Xiuwu Liao et al.

Graphs, depicting the interrelations between variables, has been widely used as effective side information for accurate data recovery in various matrix/tensor recovery related applications. In this paper, we study the tensor completion problem with graph information. Current research on graph-regularized tensor completion tends to be task-specific, lacking generality and systematic approaches. Furthermore, a recovery theory to ensure performance remains absent. Moreover, these approaches overlook the dynamic aspects of graphs, treating them as static akin to matrices, even though graphs could exhibit dynamism in tensor-related scenarios. To confront these challenges, we introduce a pioneering framework in this paper that systematically formulates a novel model, theory, and algorithm for solving the dynamic graph regularized tensor completion problem. For the model, we establish a rigorous mathematical representation of the dynamic graph, based on which we derive a new tensor-oriented graph smoothness regularization. By integrating this regularization into a tensor decomposition model based on transformed t-SVD, we develop a comprehensive model simultaneously capturing the low-rank and similarity structure of the tensor. In terms of theory, we showcase the alignment between the proposed graph smoothness regularization and a weighted tensor nuclear norm. Subsequently, we establish assurances of statistical consistency for our model, effectively bridging a gap in the theoretical examination of the problem involving tensor recovery with graph information. In terms of the algorithm, we develop a solution of high effectiveness, accompanied by a guaranteed convergence, to address the resulting model. To showcase the prowess of our proposed model in contrast to established ones, we provide in-depth numerical experiments encompassing synthetic data as well as real-world datasets.

Tianhao Chen, Xin Xu, Lu Yin et al.

Transformer architectures serve as the backbone for most modern Large Language Models, therefore their pretraining stability and convergence speed are of central concern. Motivated by the logical dependency of sequentially stacked layers, we propose Progressive Residual Warmup (ProRes) for language model pretraining. ProRes implements an "early layer learns first" philosophy by multiplying each layer's residual with a scalar that gradually warms up from 0 to 1, with deeper layers taking longer warmup steps. In this way, deeper layers wait for early layers to settle into a more stable regime before contributing to learning. We demonstrate the effectiveness of ProRes through pretraining experiments across various model scales, as well as normalization and initialization schemes. Comprehensive analysis shows that ProRes not only stabilizes pretraining but also introduces a unique optimization trajectory, leading to faster convergence, stronger generalization and better downstream performance. Our code is available at https://github.com/dandingsky/ProRes.

Tianhao Chen, Xin Xu, Zijing Liu et al.

Modern Large Language Models, such as the LLaMA, Qwen and DeepSeek series, predominantly adopt the Pre-LayerNorm (Pre-LN) Transformer architecture. While being stable during pretraining and scalable to large model sizes, Pre-LN suffers from an exponential growth in activation variance across layers, causing the shortcut to dominate over sub-layer outputs in the residual connection and limiting the learning capacity of deeper layers. To mitigate this issue, we propose Gradient-Preserving Activation Scaling (GPAS), a simple technique that can be used in combination with existing approaches. GPAS works by scaling down the intermediate activations while keeping their gradients unchanged. This leaves information in the activations intact, and avoids the gradient vanishing problem associated with gradient downscaling. Extensive experiments across various model sizes from 71M to 1B show that GPAS achieves consistent performance gains. Beyond enhancing Pre-LN Transformers, GPAS also shows promise in improving alternative architectures such as Sandwich-LN and DeepNorm, demonstrating its versatility and potential for improving training dynamics in a wide range of settings. Our code is available at https://github.com/dandingsky/GPAS.

Xin Xu, Tianhao Chen, Fan Zhang et al.

While slow-thinking large language models (LLMs) exhibit reflection-like reasoning, commonly referred to as the "aha moment:, their ability to generate informative critiques and refine prior solutions remains limited. In this paper, we introduce Double-Checker, a principled framework designed to enhance the reasoning capabilities of slow-thinking LLMs by fostering explicit self-critique and iterative refinement of their previous solutions. By fine-tuning on our curated 1,730 self-critical instances, Double-Checker empowers long-CoT LLMs to iteratively critique and refine their outputs during inference until they evaluate their solutions as correct under self-generated critiques. We validate the efficacy of Double-Checker across a comprehensive suite of reasoning benchmarks, demonstrating that iterative self-critique significantly enhances the reasoning capabilities of long-CoT LLMs. Notably, our Double-Checker increases the pass@1 performance on challenging AIME benchmarks from 4.4% to 18.2% compared to the original long-CoT LLMs. These results highlight a promising direction for developing more trustworthy and effective LLMs capable of structured self-critique. Our codes and data are available at https://github.com/XinXU-USTC/DoubleChecker

Hongrui Wang, Fan Zhang, Zhiyuan Yu et al.

Multi-track music generation has garnered significant research interest due to its precise mixing and remixing capabilities. However, existing models often overlook essential attributes such as rhythmic stability and synchronization, leading to a focus on differences between tracks rather than their inherent properties. In this paper, we introduce SyncTrack, a synchronous multi-track waveform music generation model designed to capture the unique characteristics of multi-track music. SyncTrack features a novel architecture that includes track-shared modules to establish a common rhythm across all tracks and track-specific modules to accommodate diverse timbres and pitch ranges. Each track-shared module employs two cross-track attention mechanisms to synchronize rhythmic information, while each track-specific module utilizes learnable instrument priors to better represent timbre and other unique features. Additionally, we enhance the evaluation of multi-track music quality by introducing rhythmic consistency through three novel metrics: Inner-track Rhythmic Stability (IRS), Cross-track Beat Synchronization (CBS), and Cross-track Beat Dispersion (CBD). Experiments demonstrate that SyncTrack significantly improves the multi-track music quality by enhancing rhythmic consistency.

Jiafa He, Cong Zheng, Can Yang

We focus on the problem of market making in high-frequency trading. Market making is a critical function in financial markets that involves providing liquidity by buying and selling assets. However, the increasing complexity of financial markets and the high volume of data generated by tick-level trading makes it challenging to develop effective market making strategies. To address this challenge, we propose a deep reinforcement learning approach that fuses tick-level data with periodic prediction signals to develop a more accurate and robust market making strategy. Our results of market making strategies based on different deep reinforcement learning algorithms under the simulation scenarios and real data experiments in the cryptocurrency markets show that the proposed framework outperforms existing methods in terms of profitability and risk management.

Cong Zheng, Jiafa He, Can Yang

This work is about optimal order execution, where a large order is split into several small orders to maximize the implementation shortfall. Based on the diversity of cryptocurrency exchanges, we attempt to extract cross-exchange signals by aligning data from multiple exchanges for the first time. Unlike most previous studies that focused on using single-exchange information, we discuss the impact of cross-exchange signals on the agent's decision-making in the optimal execution problem. Experimental results show that cross-exchange signals can provide additional information for the optimal execution of cryptocurrency to facilitate the optimal execution process.

Xin Xu, Shizhe Diao, Can Yang et al.

Chain-of-Thought (CoT) prompting has marked a significant advancement in enhancing the reasoning capabilities of large language models (LLMs). Previous studies have developed various extensions of CoT, which focus primarily on enhancing end-task performance. In addition, there has been research on assessing the quality of reasoning chains in CoT. This raises an intriguing question: Is it possible to predict the accuracy of LLM outputs by scrutinizing the reasoning chains they generate? To answer this research question, we introduce a benchmark, R2PE, designed specifically to explore the relationship between reasoning chains and performance in various reasoning tasks spanning five different domains. This benchmark aims to measure the falsehood of the final output of LLMs based on the reasoning steps. To make full use of information in multiple reasoning chains, we propose the process discernibility score (PDS) framework that beats the answer-checking baseline by a large margin. Concretely, this resulted in an average of $5.1\%$ increase in the F1 score and $2.97\%$ improvement in AUC-PR across all 45 subsets within R2PE. We further demonstrate our PDS's efficacy in advancing open-domain QA accuracy.

Zhiyuan Yu, Zhe Li, Hujun Bao et al.

3D human reconstruction and animation are long-standing topics in computer graphics and vision. However, existing methods typically rely on sophisticated dense-view capture and/or time-consuming per-subject optimization procedures. To address these limitations, we propose HumanRAM, a novel feed-forward approach for generalizable human reconstruction and animation from monocular or sparse human images. Our approach integrates human reconstruction and animation into a unified framework by introducing explicit pose conditions, parameterized by a shared SMPL-X neural texture, into transformer-based large reconstruction models (LRM). Given monocular or sparse input images with associated camera parameters and SMPL-X poses, our model employs scalable transformers and a DPT-based decoder to synthesize realistic human renderings under novel viewpoints and novel poses. By leveraging the explicit pose conditions, our model simultaneously enables high-quality human reconstruction and high-fidelity pose-controlled animation. Experiments show that HumanRAM significantly surpasses previous methods in terms of reconstruction accuracy, animation fidelity, and generalization performance on real-world datasets. Video results are available at https://zju3dv.github.io/humanram/.

Yunpeng Gong, Sihan Lan, Can Yang et al.

Symbolic regression aims to find interpretable analytical expressions by searching over mathematical formula spaces to capture underlying system behavior, particularly in scientific modeling governed by physical laws. However, traditional methods lack mechanisms for extracting structured physical priors from time series observations, making it difficult to capture symbolic expressions that reflect the system's global behavior. In this work, we propose a structure-aware symbolic regression framework, called StruSR, that leverages trained Physics-Informed Neural Networks (PINNs) to extract locally structured physical priors from time series data. By performing local Taylor expansions on the outputs of the trained PINN, we obtain derivative-based structural information to guide symbolic expression evolution. To assess the importance of expression components, we introduce a masking-based attribution mechanism that quantifies each subtree's contribution to structural alignment and physical residual reduction. These sensitivity scores steer mutation and crossover operations within genetic programming, preserving substructures with high physical or structural significance while selectively modifying less informative components. A hybrid fitness function jointly minimizes physics residuals and Taylor coefficient mismatch, ensuring consistency with both the governing equations and the local analytical behavior encoded by the PINN. Experiments on benchmark PDE systems demonstrate that StruSR improves convergence speed, structural fidelity, and expression interpretability compared to conventional baselines, offering a principled paradigm for physics-grounded symbolic discovery.

Xin Xu, Cliveb AI, Kai Yang et al.

Reinforcement Learning with Verifiable Reward (RLVR) effectively solves complex tasks but demands extremely long context lengths during training, leading to substantial computational costs. While multi-stage training can partially mitigate this, starting with overly short contexts often causes irreversible performance degradation, ultimately failing to reduce overall training compute significantly. In this paper, we introduce **T**hinking-**F**ree **P**olicy **I**nitialization (**TFPI**), a simple yet effective adaptation to RLVR that bridges long Chain-of-Thought (CoT) distillation and standard RLVR. TFPI employs a simple *ThinkFree* operation, explicitly discarding the thinking content via a direct *</think>* append, to reduce token usage during inference. Training with *ThinkFree*-adapted inputs improves performance and lowers token consumption, even in the original slow-thinking mode. Extensive experiments across various benchmarks have shown that TFPI accelerates RL convergence, achieves a higher performance ceiling, and yields more token-efficient reasoning models without specialized rewards or complex training designs. With TFPI only, we train a 4B model to reach 89.0% accuracy on AIME24 and 65.5% on LiveCodeBench using less than 4K H20 hours.

Yu Cai, Cheng Jin, Jiabo Ma et al.

Pathology foundation models (PFMs) have enabled robust generalization in computational pathology through large-scale datasets and expansive architectures, but their substantial computational cost, particularly for gigapixel whole slide images, limits clinical accessibility and scalability. Here, we present LitePath, a deployment-friendly foundational framework designed to mitigate model over-parameterization and patch level redundancy. LitePath integrates LiteFM, a compact model distilled from three large PFMs (Virchow2, H-Optimus-1 and UNI2) using 190 million patches, and the Adaptive Patch Selector (APS), a lightweight component for task-specific patch selection. The framework reduces model parameters by 28x and lowers FLOPs by 403.5x relative to Virchow2, enabling deployment on low-power edge hardware such as the NVIDIA Jetson Orin Nano Super. On this device, LitePath processes 208 slides per hour, 104.5x faster than Virchow2, and consumes 0.36 kWh per 3,000 slides, 171x lower than Virchow2 on an RTX3090 GPU. We validated accuracy using 37 cohorts across four organs and 26 tasks (26 internal, 9 external, and 2 prospective), comprising 15,672 slides from 9,808 patients disjoint from the pretraining data. LitePath ranks second among 19 evaluated models and outperforms larger models including H-Optimus-1, mSTAR, UNI2 and GPFM, while retaining 99.71% of the AUC of Virchow2 on average. To quantify the balance between accuracy and efficiency, we propose the Deployability Score (D-Score), defined as the weighted geometric mean of normalized AUC and normalized FLOP, where LitePath achieves the highest value, surpassing Virchow2 by 10.64%. These results demonstrate that LitePath enables rapid, cost-effective and energy-efficient pathology image analysis on accessible hardware while maintaining accuracy comparable to state-of-the-art PFMs and reducing the carbon footprint of AI deployment.

Haixia Liu, Boxiao Li, Can Yang et al.

Numerous studies have shown that label noise can lead to poor generalization performance, negatively affecting classification accuracy. Therefore, understanding the effectiveness of classifiers trained using deep neural networks in the presence of noisy labels is of considerable practical significance. In this paper, we focus on the error bounds of excess risks for classification problems with noisy labels within deep learning frameworks. We derive error bounds for the excess risk, decomposing it into statistical error and approximation error. To handle statistical dependencies (e.g., mixing sequences), we employ an independent block construction to bound the error, leveraging techniques for dependent processes. For the approximation error, we establish these theoretical results to the vector-valued setting, where the output space consists of $K$-dimensional unit vectors. Finally, under the low-dimensional manifold hypothesis, we further refine the approximation error to mitigate the impact of high-dimensional input spaces.

Gefei Wang, Yuling Jiao, Qian Xu et al.

We propose to learn a generative model via entropy interpolation with a Schrödinger Bridge. The generative learning task can be formulated as interpolating between a reference distribution and a target distribution based on the Kullback-Leibler divergence. At the population level, this entropy interpolation is characterized via an SDE on $[0,1]$ with a time-varying drift term. At the sample level, we derive our Schrödinger Bridge algorithm by plugging the drift term estimated by a deep score estimator and a deep density ratio estimator into the Euler-Maruyama method. Under some mild smoothness assumptions of the target distribution, we prove the consistency of both the score estimator and the density ratio estimator, and then establish the consistency of the proposed Schrödinger Bridge approach. Our theoretical results guarantee that the distribution learned by our approach converges to the target distribution. Experimental results on multimodal synthetic data and benchmark data support our theoretical findings and indicate that the generative model via Schrödinger Bridge is comparable with state-of-the-art GANs, suggesting a new formulation of generative learning. We demonstrate its usefulness in image interpolation and image inpainting.

Jiafa He, Chengwei Pan, Can Yang et al.

Automatic blood vessel extraction from 3D medical images is crucial for vascular disease diagnoses. Existing methods based on convolutional neural networks (CNNs) may suffer from discontinuities of extracted vessels when segmenting such thin tubular structures from 3D images. We argue that preserving the continuity of extracted vessels requires to take into account the global geometry. However, 3D convolutions are computationally inefficient, which prohibits the 3D CNNs from sufficiently large receptive fields to capture the global cues in the entire image. In this work, we propose a hybrid representation learning approach to address this challenge. The main idea is to use CNNs to learn local appearances of vessels in image crops while using another point-cloud network to learn the global geometry of vessels in the entire image. In inference, the proposed approach extracts local segments of vessels using CNNs, classifies each segment based on global geometry using the point-cloud network, and finally connects all the segments that belong to the same vessel using the shortest-path algorithm. This combination results in an efficient, fully-automatic and template-free approach to centerline extraction from 3D images. We validate the proposed approach on CTA datasets and demonstrate its superior performance compared to both traditional and CNN-based baselines.

Can Yang, Shiying Pan, Runmin Li et al.

More and more enterprises recently intend to deploy data management systems in the cloud. Due to the professionalism of software development, it has still been difficult for non-programmers to develop this kind of systems, even a small one. However, the development of SaaS brings forth the more feasibility of coding-free software development than before. Based on the SaaS architecture, this paper presents a set of theory and method for coding-free construction of a data management system, on which our contributions involve in a practical application platform, a set of construction method and a set of interface on data exchange. By abstracting the common features of data management systems, we design a universal web platform to quickly generate and publish customized system instances. Moreover, we propose a kind of method to develop a data management system using a specific requirements table in spreadsheet. The corresponding platform maps the requirements table into a system instance through parsing the table model and implementing the objective system in the running stage. Finally, we implement the proposed framework and deploy it on web. The empirical result demonstrates the feasibility and availability of the coding-free method in developing web data management systems.

Shunkang Zhang, Yuan Gao, Yuling Jiao et al.

To address the challenges in learning deep generative models (e.g.,the blurriness of variational auto-encoder and the instability of training generative adversarial networks, we propose a novel deep generative model, named Wasserstein-Wasserstein auto-encoders (WWAE). We formulate WWAE as minimization of the penalized optimal transport between the target distribution and the generated distribution. By noticing that both the prior $P_Z$ and the aggregated posterior $Q_Z$ of the latent code Z can be well captured by Gaussians, the proposed WWAE utilizes the closed-form of the squared Wasserstein-2 distance for two Gaussians in the optimization process. As a result, WWAE does not suffer from the sampling burden and it is computationally efficient by leveraging the reparameterization trick. Numerical results evaluated on multiple benchmark datasets including MNIST, fashion- MNIST and CelebA show that WWAE learns better latent structures than VAEs and generates samples of better visual quality and higher FID scores than VAEs and GANs.

Yuan Gao, Yuling Jiao, Yang Wang et al.

We propose a general framework to learn deep generative models via \textbf{V}ariational \textbf{Gr}adient Fl\textbf{ow} (VGrow) on probability spaces. The evolving distribution that asymptotically converges to the target distribution is governed by a vector field, which is the negative gradient of the first variation of the $f$-divergence between them. We prove that the evolving distribution coincides with the pushforward distribution through the infinitesimal time composition of residual maps that are perturbations of the identity map along the vector field. The vector field depends on the density ratio of the pushforward distribution and the target distribution, which can be consistently learned from a binary classification problem. Connections of our proposed VGrow method with other popular methods, such as VAE, GAN and flow-based methods, have been established in this framework, gaining new insights of deep generative learning. We also evaluated several commonly used divergences, including Kullback-Leibler, Jensen-Shannon, Jeffrey divergences as well as our newly discovered `logD' divergence which serves as the objective function of the logD-trick GAN. Experimental results on benchmark datasets demonstrate that VGrow can generate high-fidelity images in a stable and efficient manner, achieving competitive performance with state-of-the-art GANs.

Jianming Lv, Weihang Chen, Qing Li et al.

Most of the proposed person re-identification algorithms conduct supervised training and testing on single labeled datasets with small size, so directly deploying these trained models to a large-scale real-world camera network may lead to poor performance due to underfitting. It is challenging to incrementally optimize the models by using the abundant unlabeled data collected from the target domain. To address this challenge, we propose an unsupervised incremental learning algorithm, TFusion, which is aided by the transfer learning of the pedestrians' spatio-temporal patterns in the target domain. Specifically, the algorithm firstly transfers the visual classifier trained from small labeled source dataset to the unlabeled target dataset so as to learn the pedestrians' spatial-temporal patterns. Secondly, a Bayesian fusion model is proposed to combine the learned spatio-temporal patterns with visual features to achieve a significantly improved classifier. Finally, we propose a learning-to-rank based mutual promotion procedure to incrementally optimize the classifiers based on the unlabeled data in the target domain. Comprehensive experiments based on multiple real surveillance datasets are conducted, and the results show that our algorithm gains significant improvement compared with the state-of-art cross-dataset unsupervised person re-identification algorithms.

Wenfei Cao, Yao Wang, Jian Sun et al.

Background subtraction has been a fundamental and widely studied task in video analysis, with a wide range of applications in video surveillance, teleconferencing and 3D modeling. Recently, motivated by compressive imaging, background subtraction from compressive measurements (BSCM) is becoming an active research task in video surveillance. In this paper, we propose a novel tensor-based robust PCA (TenRPCA) approach for BSCM by decomposing video frames into backgrounds with spatial-temporal correlations and foregrounds with spatio-temporal continuity in a tensor framework. In this approach, we use 3D total variation (TV) to enhance the spatio-temporal continuity of foregrounds, and Tucker decomposition to model the spatio-temporal correlations of video background. Based on this idea, we design a basic tensor RPCA model over the video frames, dubbed as the holistic TenRPCA model (H-TenRPCA). To characterize the correlations among the groups of similar 3D patches of video background, we further design a patch-group-based tensor RPCA model (PG-TenRPCA) by joint tensor Tucker decompositions of 3D patch groups for modeling the video background. Efficient algorithms using alternating direction method of multipliers (ADMM) are developed to solve the proposed models. Extensive experiments on simulated and real-world videos demonstrate the superiority of the proposed approaches over the existing state-of-the-art approaches.

Xiaowei Zhou, Can Yang, Hongyu Zhao et al.

Low-rank modeling generally refers to a class of methods that solve problems by representing variables of interest as low-rank matrices. It has achieved great success in various fields including computer vision, data mining, signal processing and bioinformatics. Recently, much progress has been made in theories, algorithms and applications of low-rank modeling, such as exact low-rank matrix recovery via convex programming and matrix completion applied to collaborative filtering. These advances have brought more and more attentions to this topic. In this paper, we review the recent advance of low-rank modeling, the state-of-the-art algorithms, and related applications in image analysis. We first give an overview to the concept of low-rank modeling and challenging problems in this area. Then, we summarize the models and algorithms for low-rank matrix recovery and illustrate their advantages and limitations with numerical experiments. Next, we introduce a few applications of low-rank modeling in the context of image analysis. Finally, we conclude this paper with some discussions.

Jian Huang, Yuling Jiao, Bangti Jin et al.

In this paper, we consider the problem of recovering a sparse signal based on penalized least squares formulations. We develop a novel algorithm of primal-dual active set type for a class of nonconvex sparsity-promoting penalties, including $\ell^0$, bridge, smoothly clipped absolute deviation, capped $\ell^1$ and minimax concavity penalty. First we establish the existence of a global minimizer for the related optimization problems. Then we derive a novel necessary optimality condition for the global minimizer using the associated thresholding operator. The solutions to the optimality system are coordinate-wise minimizers, and under minor conditions, they are also local minimizers. Upon introducing the dual variable, the active set can be determined using the primal and dual variables together. Further, this relation lends itself to an iterative algorithm of active set type which at each step involves first updating the primal variable only on the active set and then updating the dual variable explicitly. When combined with a continuation strategy on the regularization parameter, the primal dual active set method is shown to converge globally to the underlying regression target under certain regularity conditions. Extensive numerical experiments with both simulated and real data demonstrate its superior performance in efficiency and accuracy compared with the existing sparse recovery methods.