Rethinking Data Augmentation for Single-source Domain Generalization in Medical Image SegmentationZixian Su, Kai Yao, Xi Yang et al.
Single-source domain generalization (SDG) in medical image segmentation is a challenging yet essential task as domain shifts are quite common among clinical image datasets. Previous attempts most conduct global-only/random augmentation. Their augmented samples are usually insufficient in diversity and informativeness, thus failing to cover the possible target domain distribution. In this paper, we rethink the data augmentation strategy for SDG in medical image segmentation. Motivated by the class-level representation invariance and style mutability of medical images, we hypothesize that unseen target data can be sampled from a linear combination of $C$ (the class number) random variables, where each variable follows a location-scale distribution at the class level. Accordingly, data augmented can be readily made by sampling the random variables through a general form. On the empirical front, we implement such strategy with constrained B$\acute{\rm e}$zier transformation on both global and local (i.e. class-level) regions, which can largely increase the augmentation diversity. A Saliency-balancing Fusion mechanism is further proposed to enrich the informativeness by engaging the gradient information, guiding augmentation with proper orientation and magnitude. As an important contribution, we prove theoretically that our proposed augmentation can lead to an upper bound of the generalization risk on the unseen target domain, thus confirming our hypothesis. Combining the two strategies, our Saliency-balancing Location-scale Augmentation (SLAug) exceeds the state-of-the-art works by a large margin in two challenging SDG tasks. Code is available at https://github.com/Kaiseem/SLAug .
6.5CVMay 24, 2022
Mind The Gap: Alleviating Local Imbalance for Unsupervised Cross-Modality Medical Image SegmentationZixian Su, Kai Yao, Xi Yang et al.
Unsupervised cross-modality medical image adaptation aims to alleviate the severe domain gap between different imaging modalities without using the target domain label. A key in this campaign relies upon aligning the distributions of source and target domain. One common attempt is to enforce the global alignment between two domains, which, however, ignores the fatal local-imbalance domain gap problem, i.e., some local features with larger domain gap are harder to transfer. Recently, some methods conduct alignment focusing on local regions to improve the efficiency of model learning. While this operation may cause a deficiency of critical information from contexts. To tackle this limitation, we propose a novel strategy to alleviate the domain gap imbalance considering the characteristics of medical images, namely Global-Local Union Alignment. Specifically, a feature-disentanglement style-transfer module first synthesizes the target-like source-content images to reduce the global domain gap. Then, a local feature mask is integrated to reduce the 'inter-gap' for local features by prioritizing those discriminative features with larger domain gap. This combination of global and local alignment can precisely localize the crucial regions in segmentation target while preserving the overall semantic consistency. We conduct a series of experiments with two cross-modality adaptation tasks, i,e. cardiac substructure and abdominal multi-organ segmentation. Experimental results indicate that our method achieves state-of-the-art performance in both tasks.
5.2CVMay 23, 2024
SCMix: Stochastic Compound Mixing for Open Compound Domain Adaptation in Semantic SegmentationKai Yao, Zhaorui Tan, Zixian Su et al.
Open compound domain adaptation (OCDA) aims to transfer knowledge from a labeled source domain to a mix of unlabeled homogeneous compound target domains while generalizing to open unseen domains. Existing OCDA methods solve the intra-domain gaps by a divide-and-conquer strategy, which divides the problem into several individual and parallel domain adaptation (DA) tasks. Such approaches often contain multiple sub-networks or stages, which may constrain the model's performance. In this work, starting from the general DA theory, we establish the generalization bound for the setting of OCDA. Built upon this, we argue that conventional OCDA approaches may substantially underestimate the inherent variance inside the compound target domains for model generalization. We subsequently present Stochastic Compound Mixing (SCMix), an augmentation strategy with the primary objective of mitigating the divergence between source and mixed target distributions. We provide theoretical analysis to substantiate the superiority of SCMix and prove that the previous methods are sub-groups of our methods. Extensive experiments show that our method attains a lower empirical risk on OCDA semantic segmentation tasks, thus supporting our theories. Combining the transformer architecture, SCMix achieves a notable performance boost compared to the SoTA results.
2.6LGNov 16, 2024
Un-mixing Test-time Adaptation under Heterogeneous Data StreamsZixian Su, Jingwei Guo, Xi Yang et al.
Deploying deep models in real-world scenarios remains challenging due to significant performance drops under distribution shifts between training and deployment environments. Test-Time Adaptation (TTA) has recently emerged as a promising solution, enabling on-the-fly model adaptation without access to source data. However, its effectiveness degrades significantly in the presence of complex, mixed distribution shifts - common in practical settings - where multiple latent domains coexist. Adapting under such intrinsic heterogeneity, especially in unlabeled and online conditions, remains an open and underexplored challenge. In this paper, we study TTA under mixed distribution shifts and move beyond conventional homogeneous adaptation paradigms. By revisiting TTA from a frequency-domain perspective, we observe that distribution heterogeneity often manifests in Fourier space - for instance, high-frequency components tend to carry domain-specific variations. This motivates us to perform domain-aware separation using high-frequency texture cues, making diverse shift patterns more tractable. To this end, we propose FreDA, a novel Frequency-based Decentralized Adaptation framework that decomposes globally heterogeneous data into locally homogeneous components in the frequency domain. It further employs decentralized learning and augmentation strategies to robustly adapt under complex, evolving shifts. Extensive experiments across various environments (corrupted, natural, and medical) demonstrate the superiority of our proposed framework over the state-of-the-arts.
CrossMoDA 2021 challenge: Benchmark of Cross-Modality Domain Adaptation techniques for Vestibular Schwannoma and Cochlea SegmentationReuben Dorent, Aaron Kujawa, Marina Ivory et al.
Domain Adaptation (DA) has recently raised strong interests in the medical imaging community. While a large variety of DA techniques has been proposed for image segmentation, most of these techniques have been validated either on private datasets or on small publicly available datasets. Moreover, these datasets mostly addressed single-class problems. To tackle these limitations, the Cross-Modality Domain Adaptation (crossMoDA) challenge was organised in conjunction with the 24th International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI 2021). CrossMoDA is the first large and multi-class benchmark for unsupervised cross-modality DA. The challenge's goal is to segment two key brain structures involved in the follow-up and treatment planning of vestibular schwannoma (VS): the VS and the cochleas. Currently, the diagnosis and surveillance in patients with VS are performed using contrast-enhanced T1 (ceT1) MRI. However, there is growing interest in using non-contrast sequences such as high-resolution T2 (hrT2) MRI. Therefore, we created an unsupervised cross-modality segmentation benchmark. The training set provides annotated ceT1 (N=105) and unpaired non-annotated hrT2 (N=105). The aim was to automatically perform unilateral VS and bilateral cochlea segmentation on hrT2 as provided in the testing set (N=137). A total of 16 teams submitted their algorithm for the evaluation phase. The level of performance reached by the top-performing teams is strikingly high (best median Dice - VS:88.4%; Cochleas:85.7%) and close to full supervision (median Dice - VS:92.5%; Cochleas:87.7%). All top-performing methods made use of an image-to-image translation approach to transform the source-domain images into pseudo-target-domain images. A segmentation network was then trained using these generated images and the manual annotations provided for the source image.