CVSep 22, 2023
Understanding Calibration of Deep Neural Networks for Medical Image ClassificationAbhishek Singh Sambyal, Usma Niyaz, Narayanan C. Krishnan et al.
In the field of medical image analysis, achieving high accuracy is not enough; ensuring well-calibrated predictions is also crucial. Confidence scores of a deep neural network play a pivotal role in explainability by providing insights into the model's certainty, identifying cases that require attention, and establishing trust in its predictions. Consequently, the significance of a well-calibrated model becomes paramount in the medical imaging domain, where accurate and reliable predictions are of utmost importance. While there has been a significant effort towards training modern deep neural networks to achieve high accuracy on medical imaging tasks, model calibration and factors that affect it remain under-explored. To address this, we conducted a comprehensive empirical study that explores model performance and calibration under different training regimes. We considered fully supervised training, which is the prevailing approach in the community, as well as rotation-based self-supervised method with and without transfer learning, across various datasets and architecture sizes. Multiple calibration metrics were employed to gain a holistic understanding of model calibration. Our study reveals that factors such as weight distributions and the similarity of learned representations correlate with the calibration trends observed in the models. Notably, models trained using rotation-based self-supervised pretrained regime exhibit significantly better calibration while achieving comparable or even superior performance compared to fully supervised models across different medical imaging datasets. These findings shed light on the importance of model calibration in medical image analysis and highlight the benefits of incorporating self-supervised learning approach to improve both performance and calibration.
CVDec 6, 2022
Leveraging Different Learning Styles for Improved Knowledge Distillation in Biomedical ImagingUsma Niyaz, Abhishek Singh Sambyal, Deepti R. Bathula
Learning style refers to a type of training mechanism adopted by an individual to gain new knowledge. As suggested by the VARK model, humans have different learning preferences, like Visual (V), Auditory (A), Read/Write (R), and Kinesthetic (K), for acquiring and effectively processing information. Our work endeavors to leverage this concept of knowledge diversification to improve the performance of model compression techniques like Knowledge Distillation (KD) and Mutual Learning (ML). Consequently, we use a single-teacher and two-student network in a unified framework that not only allows for the transfer of knowledge from teacher to students (KD) but also encourages collaborative learning between students (ML). Unlike the conventional approach, where the teacher shares the same knowledge in the form of predictions or feature representations with the student network, our proposed approach employs a more diversified strategy by training one student with predictions and the other with feature maps from the teacher. We further extend this knowledge diversification by facilitating the exchange of predictions and feature maps between the two student networks, enriching their learning experiences. We have conducted comprehensive experiments with three benchmark datasets for both classification and segmentation tasks using two different network architecture combinations. These experimental results demonstrate that knowledge diversification in a combined KD and ML framework outperforms conventional KD or ML techniques (with similar network configuration) that only use predictions with an average improvement of 2%. Furthermore, consistent improvement in performance across different tasks, with various network architectures, and over state-of-the-art techniques establishes the robustness and generalizability of the proposed model
CVOct 21, 2021
Augmenting Knowledge Distillation With Peer-To-Peer Mutual Learning For Model CompressionUsma Niyaz, Deepti R. Bathula
Knowledge distillation (KD) is an effective model compression technique where a compact student network is taught to mimic the behavior of a complex and highly trained teacher network. In contrast, Mutual Learning (ML) provides an alternative strategy where multiple simple student networks benefit from sharing knowledge, even in the absence of a powerful but static teacher network. Motivated by these findings, we propose a single-teacher, multi-student framework that leverages both KD and ML to achieve better performance. Furthermore, an online distillation strategy is utilized to train the teacher and students simultaneously. To evaluate the performance of the proposed approach, extensive experiments were conducted using three different versions of teacher-student networks on benchmark biomedical classification (MSI vs. MSS) and object detection (Polyp Detection) tasks. Ensemble of student networks trained in the proposed manner achieved better results than the ensemble of students trained using KD or ML individually, establishing the benefit of augmenting knowledge transfer from teacher to students with peer-to-peer learning between students.
IVAug 4, 2021
MRI to PET Cross-Modality Translation using Globally and Locally Aware GAN (GLA-GAN) for Multi-Modal Diagnosis of Alzheimer's DiseaseApoorva Sikka, Skand Peri, Jitender Singh Virk et al.
Medical imaging datasets are inherently high dimensional with large variability and low sample sizes that limit the effectiveness of deep learning algorithms. Recently, generative adversarial networks (GANs) with the ability to synthesize realist images have shown great potential as an alternative to standard data augmentation techniques. Our work focuses on cross-modality synthesis of fluorodeoxyglucose~(FDG) Positron Emission Tomography~(PET) scans from structural Magnetic Resonance~(MR) images using generative models to facilitate multi-modal diagnosis of Alzheimer's disease (AD). Specifically, we propose a novel end-to-end, globally and locally aware image-to-image translation GAN (GLA-GAN) with a multi-path architecture that enforces both global structural integrity and fidelity to local details. We further supplement the standard adversarial loss with voxel-level intensity, multi-scale structural similarity (MS-SSIM) and region-of-interest (ROI) based loss components that reduce reconstruction error, enforce structural consistency at different scales and perceive variation in regional sensitivity to AD respectively. Experimental results demonstrate that our GLA-GAN not only generates synthesized FDG-PET scans with enhanced image quality but also superior clinical utility in improving AD diagnosis compared to state-of-the-art models. Finally, we attempt to interpret some of the internal units of the GAN that are closely related to this specific cross-modality generation task.