Tsuyoshi Murata

Quentin Jodelet, Xin Liu, Yin Jun Phua et al.

Class-incremental learning aims to learn new classes in an incremental fashion without forgetting the previously learned ones. Several research works have shown how additional data can be used by incremental models to help mitigate catastrophic forgetting. In this work, following the recent breakthrough in text-to-image generative models and their wide distribution, we propose the use of a pretrained Stable Diffusion model as a source of additional data for class-incremental learning. Compared to competitive methods that rely on external, often unlabeled, datasets of real images, our approach can generate synthetic samples belonging to the same classes as the previously encountered images. This allows us to use those additional data samples not only in the distillation loss but also for replay in the classification loss. Experiments on the competitive benchmarks CIFAR100, ImageNet-Subset, and ImageNet demonstrate how this new approach can be used to further improve the performance of state-of-the-art methods for class-incremental learning on large scale datasets.

Tsuyoshi Murata, Naveed Afzal

Graph convolution is a recent scalable method for performing deep feature learning on attributed graphs by aggregating local node information over multiple layers. Such layers only consider attribute information of node neighbors in the forward model and do not incorporate knowledge of global network structure in the learning task. In particular, the modularity function provides a convenient source of information about the community structure of networks. In this work we investigate the effect on the quality of learned representations by the incorporation of community structure preservation objectives of networks in the graph convolutional model. We incorporate the objectives in two ways, through an explicit regularization term in the cost function in the output layer and as an additional loss term computed via an auxiliary layer. We report the effect of community structure preserving terms in the graph convolutional architectures. Experimental evaluation on two attributed bibilographic networks showed that the incorporation of the community-preserving objective improves semi-supervised node classification accuracy in the sparse label regime.

Justin Dachille, Aurora Rossi, Sunil Kumar Maurya et al.

Computing node importance in networks is a long-standing fundamental problem that has driven extensive study of various centrality measures. A particularly well-known centrality measure is betweenness centrality, which becomes computationally prohibitive on large-scale networks. Graph Neural Network (GNN) models have thus been proposed to predict node rankings according to their relative betweenness centrality. However, state-of-the-art methods fail to generalize to high-diameter graphs such as road networks. We propose BRAVA-GNN, a lightweight GNN architecture that leverages the empirically observed correlation linking betweenness centrality to degree-based quantities, in particular multi-hop degree mass. This correlation motivates the use of degree masses as size-invariant node features and synthetic training graphs that closely match the degree distributions of real networks. Furthermore, while previous work relies on scale-free synthetic graphs, we leverage the hyperbolic random graph model, which reproduces power-law exponents outside the scale-free regime, better capturing the structure of real-world graphs like road networks. This design enables BRAVA-GNN to generalize across diverse graph families while using 54x fewer parameters than the most lightweight existing GNN baseline. Extensive experiments on 19 real-world networks, spanning social, web, email, and road graphs, show that BRAVA-GNN achieves up to 214% improvement in Kendall-Tau correlation and up to 70x speedup in inference time over state-of-the-art GNN-based approaches, particularly on challenging road networks.

Sukwon Yun, Xin Liu, Yunhak Oh et al.

In real-world graphs, we often encounter missing feature situations where a few or the majority of node features, e.g., sensitive information, are missed. In such scenarios, directly utilizing Graph Neural Networks (GNNs) would yield sub-optimal results in downstream tasks such as node classification. Despite the emergence of a few GNN-based methods attempting to mitigate its missing situation, when only a few features are available, they rather perform worse than traditional structure-based models. To this end, we propose a novel framework that further illuminates the potential of classical Label Propagation (Oldie), taking advantage of Feature Propagation, especially when only a partial feature is available. Now called by GOODIE, it takes a hybrid approach to obtain embeddings from the Label Propagation branch and Feature Propagation branch. To do so, we first design a GNN-based decoder that enables the Label Propagation branch to output hidden embeddings that align with those of the FP branch. Then, GOODIE automatically captures the significance of structure and feature information thanks to the newly designed Structure-Feature Attention. Followed by a novel Pseudo-Label contrastive learning that differentiates the contribution of each positive pair within pseudo-labels originating from the LP branch, GOODIE outputs the final prediction for the unlabeled nodes. Through extensive experiments, we demonstrate that our proposed model, GOODIE, outperforms the existing state-of-the-art methods not only when only a few features are available but also in abundantly available situations. Source code of GOODIE is available at: https://github.com/SukwonYun/GOODIE.

Quentin Jodelet, Xin Liu, Yin Jun Phua et al.

Exemplar-Free Class Incremental Learning is a highly challenging setting where replay memory is unavailable. Methods relying on frozen feature extractors have drawn attention recently in this setting due to their impressive performances and lower computational costs. However, those methods are highly dependent on the data used to train the feature extractor and may struggle when an insufficient amount of classes are available during the first incremental step. To overcome this limitation, we propose to use a pre-trained text-to-image diffusion model in order to generate synthetic images of future classes and use them to train the feature extractor. Experiments on the standard benchmarks CIFAR100 and ImageNet-Subset demonstrate that our proposed method can be used to improve state-of-the-art methods for exemplar-free class incremental learning, especially in the most difficult settings where the first incremental step only contains few classes. Moreover, we show that using synthetic samples of future classes achieves higher performance than using real data from different classes, paving the way for better and less costly pre-training methods for incremental learning.

Tai Hasegawa, Sukwon Yun, Xin Liu et al.

Graph Neural Networks (GNNs) have achieved notable success in various applications over graph data. However, recent research has revealed that real-world graphs often contain noise, and GNNs are susceptible to noise in the graph. To address this issue, several Graph Structure Learning (GSL) models have been introduced. While GSL models are tailored to enhance robustness against edge noise through edge reconstruction, a significant limitation surfaces: their high reliance on node features. This inherent dependence amplifies their susceptibility to noise within node features. Recognizing this vulnerability, we present DEGNN, a novel GNN model designed to adeptly mitigate noise in both edges and node features. The core idea of DEGNN is to design two separate experts: an edge expert and a node feature expert. These experts utilize self-supervised learning techniques to produce modified edges and node features. Leveraging these modified representations, DEGNN subsequently addresses downstream tasks, ensuring robustness against noise present in both edges and node features of real-world graphs. Notably, the modification process can be trained end-to-end, empowering DEGNN to adjust dynamically and achieves optimal edge and node representations for specific tasks. Comprehensive experiments demonstrate DEGNN's efficacy in managing noise, both in original real-world graphs and in graphs with synthetic noise.

Nuttapong Chairatanakul, Hoang NT, Xin Liu et al.

Modern recommender systems are required to adapt to the change in user preferences and item popularity. Such a problem is known as the temporal dynamics problem, and it is one of the main challenges in recommender system modeling. Different from the popular recurrent modeling approach, we propose a new solution named LeapRec to the temporal dynamic problem by using trajectory-based meta-learning to model time dependencies. LeapRec characterizes temporal dynamics by two complement components named global time leap (GTL) and ordered time leap (OTL). By design, GTL learns long-term patterns by finding the shortest learning path across unordered temporal data. Cooperatively, OTL learns short-term patterns by considering the sequential nature of the temporal data. Our experimental results show that LeapRec consistently outperforms the state-of-the-art methods on several datasets and recommendation metrics. Furthermore, we provide an empirical study of the interaction between GTL and OTL, showing the effects of long- and short-term modeling.

Sunil Kumar Maurya, Xin Liu, Tsuyoshi Murata

Graph Neural Networks have become one of the indispensable tools to learn from graph-structured data, and their usefulness has been shown in wide variety of tasks. In recent years, there have been tremendous improvements in architecture design, resulting in better performance on various prediction tasks. In general, these neural architectures combine node feature aggregation and feature transformation using learnable weight matrix in the same layer. This makes it challenging to analyze the importance of node features aggregated from various hops and the expressiveness of the neural network layers. As different graph datasets show varying levels of homophily and heterophily in features and class label distribution, it becomes essential to understand which features are important for the prediction tasks without any prior information. In this work, we decouple the node feature aggregation step and depth of graph neural network, and empirically analyze how different aggregated features play a role in prediction performance. We show that not all features generated via aggregation steps are useful, and often using these less informative features can be detrimental to the performance of the GNN model. Through our experiments, we show that learning certain subsets of these features can lead to better performance on wide variety of datasets. We propose to use softmax as a regularizer and "soft-selector" of features aggregated from neighbors at different hop distances; and L2-Normalization over GNN layers. Combining these techniques, we present a simple and shallow model, Feature Selection Graph Neural Network (FSGNN), and show empirically that the proposed model achieves comparable or even higher accuracy than state-of-the-art GNN models in nine benchmark datasets for the node classification task, with remarkable improvements up to 51.1%.

Zarina Rakhimberdina, Quentin Jodelet, Xin Liu et al.

With the advent of brain imaging techniques and machine learning tools, much effort has been devoted to building computational models to capture the encoding of visual information in the human brain. One of the most challenging brain decoding tasks is the accurate reconstruction of the perceived natural images from brain activities measured by functional magnetic resonance imaging (fMRI). In this work, we survey the most recent deep learning methods for natural image reconstruction from fMRI. We examine these methods in terms of architectural design, benchmark datasets, and evaluation metrics and present a fair performance evaluation across standardized evaluation metrics. Finally, we discuss the strengths and limitations of existing studies and present potential future directions.

Nuttapong Chairatanakul, Noppayut Sriwatanasakdi, Nontawat Charoenphakdee et al.

In cross-lingual text classification, it is required that task-specific training data in high-resource source languages are available, where the task is identical to that of a low-resource target language. However, collecting such training data can be infeasible because of the labeling cost, task characteristics, and privacy concerns. This paper proposes an alternative solution that uses only task-independent word embeddings of high-resource languages and bilingual dictionaries. First, we construct a dictionary-based heterogeneous graph (DHG) from bilingual dictionaries. This opens the possibility to use graph neural networks for cross-lingual transfer. The remaining challenge is the heterogeneity of DHG because multiple languages are considered. To address this challenge, we propose dictionary-based heterogeneous graph neural network (DHGNet) that effectively handles the heterogeneity of DHG by two-step aggregations, which are word-level and language-level aggregations. Experimental results demonstrate that our method outperforms pretrained models even though it does not access to large corpora. Furthermore, it can perform well even though dictionaries contain many incorrect translations. Its robustness allows the usage of a wider range of dictionaries such as an automatically constructed dictionary and crowdsourced dictionary, which are convenient for real-world applications.

Sunil Kumar Maurya, Xin Liu, Tsuyoshi Murata

Graph Neural Networks have emerged as a useful tool to learn on the data by applying additional constraints based on the graph structure. These graphs are often created with assumed intrinsic relations between the entities. In recent years, there have been tremendous improvements in the architecture design, pushing the performance up in various prediction tasks. In general, these neural architectures combine layer depth and node feature aggregation steps. This makes it challenging to analyze the importance of features at various hops and the expressiveness of the neural network layers. As different graph datasets show varying levels of homophily and heterophily in features and class label distribution, it becomes essential to understand which features are important for the prediction tasks without any prior information. In this work, we decouple the node feature aggregation step and depth of graph neural network and introduce several key design strategies for graph neural networks. More specifically, we propose to use softmax as a regularizer and "Soft-Selector" of features aggregated from neighbors at different hop distances; and "Hop-Normalization" over GNN layers. Combining these techniques, we present a simple and shallow model, Feature Selection Graph Neural Network (FSGNN), and show empirically that the proposed model outperforms other state of the art GNN models and achieves up to 64% improvements in accuracy on node classification tasks. Moreover, analyzing the learned soft-selection parameters of the model provides a simple way to study the importance of features in the prediction tasks. Finally, we demonstrate with experiments that the model is scalable for large graphs with millions of nodes and billions of edges.

Quentin Jodelet, Xin Liu, Tsuyoshi Murata

When incrementally trained on new classes, deep neural networks are subject to catastrophic forgetting which leads to an extreme deterioration of their performance on the old classes while learning the new ones. Using a small memory containing few samples from past classes has shown to be an effective method to mitigate catastrophic forgetting. However, due to the limited size of the replay memory, there is a large imbalance between the number of samples for the new and the old classes in the training dataset resulting in bias in the final model. To address this issue, we propose to use the Balanced Softmax Cross-Entropy and show that it can be seamlessly combined with state-of-the-art approaches for class-incremental learning in order to improve their accuracy while also potentially decreasing the computational cost of the training procedure. We further extend this approach to the more demanding class-incremental learning without memory setting and achieve competitive results with memory-based approaches. Experiments on the challenging ImageNet, ImageNet-Subset and CIFAR100 benchmarks with various settings demonstrate the benefits of our approach.

Hoang NT, Takanori Maehara, Tsuyoshi Murata

We study Graph Convolutional Networks (GCN) from the graph signal processing viewpoint by addressing a difference between learning graph filters with fully connected weights versus trainable polynomial coefficients. We find that by stacking graph filters with learnable polynomial parameters, we can build a highly adaptive and robust vertex classification model. Our treatment here relaxes the low-frequency (or equivalently, high homophily) assumptions in existing vertex classification models, resulting a more ubiquitous solution in terms of spectral properties. Empirically, by using only one hyper-parameter setting, our model achieves strong results on most benchmark datasets across the frequency spectrum.

Kaushalya Madhawa, Tsuyoshi Murata

The objective of active learning (AL) is to train classification models with less number of labeled instances by selecting only the most informative instances for labeling. The AL algorithms designed for other data types such as images and text do not perform well on graph-structured data. Although a few heuristics-based AL algorithms have been proposed for graphs, a principled approach is lacking. In this paper, we propose MetAL, an AL approach that selects unlabeled instances that directly improve the future performance of a classification model. For a semi-supervised learning problem, we formulate the AL task as a bilevel optimization problem. Based on recent work in meta-learning, we use the meta-gradients to approximate the impact of retraining the model with any unlabeled instance on the model performance. Using multiple graph datasets belonging to different domains, we demonstrate that MetAL efficiently outperforms existing state-of-the-art AL algorithms.

Hibiki Taguchi, Xin Liu, Tsuyoshi Murata

Graph Convolutional Network (GCN) has experienced great success in graph analysis tasks. It works by smoothing the node features across the graph. The current GCN models overwhelmingly assume that the node feature information is complete. However, real-world graph data are often incomplete and containing missing features. Traditionally, people have to estimate and fill in the unknown features based on imputation techniques and then apply GCN. However, the process of feature filling and graph learning are separated, resulting in degraded and unstable performance. This problem becomes more serious when a large number of features are missing. We propose an approach that adapts GCN to graphs containing missing features. In contrast to traditional strategy, our approach integrates the processing of missing features and graph learning within the same neural network architecture. Our idea is to represent the missing data by Gaussian Mixture Model (GMM) and calculate the expected activation of neurons in the first hidden layer of GCN, while keeping the other layers of the network unchanged. This enables us to learn the GMM parameters and network weight parameters in an end-to-end manner. Notably, our approach does not increase the computational complexity of GCN and it is consistent with GCN when the features are complete. We demonstrate through extensive experiments that our approach significantly outperforms the imputation-based methods in node classification and link prediction tasks. We show that the performance of our approach for the case with a low level of missing features is even superior to GCN for the case with complete features.

Hoang NT, Choong Jun Jin, Tsuyoshi Murata

We study the robustness to symmetric label noise of GNNs training procedures. By combining the nonlinear neural message-passing models (e.g. Graph Isomorphism Networks, GraphSAGE, etc.) with loss correction methods, we present a noise-tolerant approach for the graph classification task. Our experiments show that test accuracy can be improved under the artificial symmetric noisy setting.

Kaushalya Madhawa, Tsuyoshi Murata

Real-world networks such as social and communication networks are too large to be observed entirely. Such networks are often partially observed such that network size, network topology, and nodes of the original network are unknown. In this paper we formalize the Adaptive Graph Exploring problem. We assume that we are given an incomplete snapshot of a large network and additional nodes can be discovered by querying nodes in the currently observed network. The goal of this problem is to maximize the number of observed nodes within a given query budget. Querying which set of nodes maximizes the size of the observed network? We formulate this problem as an exploration-exploitation problem and propose a novel nonparametric multi-arm bandit (MAB) algorithm for identifying which nodes to be queried. Our contributions include: (1) $i$KNN-UCB, a novel nonparametric MAB algorithm, applies $k$-nearest neighbor UCB to the setting when the arms are presented in a vector space, (2) provide theoretical guarantee that $i$KNN-UCB algorithm has sublinear regret, and (3) applying $i$KNN-UCB algorithm on synthetic networks and real-world networks from different domains, we show that our method discovers up to 40% more nodes compared to existing baselines.