5.9CVApr 16, 2023
Multimodal Representation Learning of Cardiovascular Magnetic Resonance ImagingJielin Qiu, Peide Huang, Makiya Nakashima et al.
Self-supervised learning is crucial for clinical imaging applications, given the lack of explicit labels in healthcare. However, conventional approaches that rely on precise vision-language alignment are not always feasible in complex clinical imaging modalities, such as cardiac magnetic resonance (CMR). CMR provides a comprehensive visualization of cardiac anatomy, physiology, and microstructure, making it challenging to interpret. Additionally, CMR reports require synthesizing information from sequences of images and different views, resulting in potentially weak alignment between the study and diagnosis report pair. To overcome these challenges, we propose \textbf{CMRformer}, a multimodal learning framework to jointly learn sequences of CMR images and associated cardiologist's reports. Moreover, one of the major obstacles to improving CMR study is the lack of large, publicly available datasets. To bridge this gap, we collected a large \textbf{CMR dataset}, which consists of 13,787 studies from clinical cases. By utilizing our proposed CMRformer and our collected dataset, we achieved remarkable performance in real-world clinical tasks, such as CMR image retrieval and diagnosis report retrieval. Furthermore, the learned representations are evaluated to be practically helpful for downstream applications, such as disease classification. Our work could potentially expedite progress in the CMR study and lead to more accurate and effective diagnosis and treatment.
4.8IVMay 25, 2022
Interaction of a priori Anatomic Knowledge with Self-Supervised Contrastive Learning in Cardiac Magnetic Resonance ImagingMakiya Nakashima, Inyeop Jang, Ramesh Basnet et al.
Training deep learning models on cardiac magnetic resonance imaging (CMR) can be a challenge due to the small amount of expert generated labels and inherent complexity of data source. Self-supervised contrastive learning (SSCL) has recently been shown to boost performance in several medical imaging tasks. However, it is unclear how much the pre-trained representation reflects the primary organ of interest compared to spurious surrounding tissue. In this work, we evaluate the optimal method of incorporating prior knowledge of anatomy into a SSCL training paradigm. Specifically, we evaluate using a segmentation network to explicitly local the heart in CMR images, followed by SSCL pretraining in multiple diagnostic tasks. We find that using a priori knowledge of anatomy can greatly improve the downstream diagnostic performance. Furthermore, SSCL pre-training with in-domain data generally improved downstream performance and more human-like saliency compared to end-to-end training and ImageNet pre-trained networks. However, introducing anatomic knowledge to pre-training generally does not have significant impact.
GraSS: Scalable Data Attribution with Gradient Sparsification and Sparse ProjectionPingbang Hu, Joseph Melkonian, Weijing Tang et al.
Gradient-based data attribution methods, such as influence functions, are critical for understanding the impact of individual training samples without requiring repeated model retraining. However, their scalability is often limited by the high computational and memory costs associated with per-sample gradient computation. In this work, we propose GraSS, a novel gradient compression algorithm and its variants FactGraSS for linear layers specifically, that explicitly leverage the inherent sparsity of per-sample gradients to achieve sub-linear space and time complexity. Extensive experiments demonstrate the effectiveness of our approach, achieving substantial speedups while preserving data influence fidelity. In particular, FactGraSS achieves up to 165% faster throughput on billion-scale models compared to the previous state-of-the-art baselines. Our code is publicly available at https://github.com/TRAIS-Lab/GraSS.
2.3SPOct 21, 2025
Channel-Aware Vector Quantization for Robust Semantic Communication on Discrete ChannelsZian Meng, Qiang Li, Wenqian Tang et al.
Deep learning-based semantic communication has largely relied on analog or semi-digital transmission, which limits compatibility with modern digital communication infrastructures. Recent studies have employed vector quantization (VQ) to enable discrete semantic transmission, yet existing methods neglect channel state information during codebook optimization, leading to suboptimal robustness. To bridge this gap, we propose a channel-aware vector quantization (CAVQ) algorithm within a joint source-channel coding (JSCC) framework, termed VQJSCC, established on a discrete memoryless channel. In this framework, semantic features are discretized and directly mapped to modulation constellation symbols, while CAVQ integrates channel transition probabilities into the quantization process, aligning easily confused symbols with semantically similar codewords. A multi-codebook alignment mechanism is further introduced to handle mismatches between codebook order and modulation order by decomposing the transmission stream into multiple independently optimized subchannels. Experimental results demonstrate that VQJSCC effectively mitigates the digital cliff effect, achieves superior reconstruction quality across various modulation schemes, and outperforms state-of-the-art digital semantic communication baselines in both robustness and efficiency.
9.2LGDec 2, 2024
A Versatile Influence Function for Data Attribution with Non-Decomposable LossJunwei Deng, Weijing Tang, Jiaqi W. Ma
Influence function, a technique rooted in robust statistics, has been adapted in modern machine learning for a novel application: data attribution -- quantifying how individual training data points affect a model's predictions. However, the common derivation of influence functions in the data attribution literature is limited to loss functions that can be decomposed into a sum of individual data point losses, with the most prominent examples known as M-estimators. This restricts the application of influence functions to more complex learning objectives, which we refer to as non-decomposable losses, such as contrastive or ranking losses, where a unit loss term depends on multiple data points and cannot be decomposed further. In this work, we bridge this gap by revisiting the general formulation of influence function from robust statistics, which extends beyond M-estimators. Based on this formulation, we propose a novel method, the Versatile Influence Function (VIF), that can be straightforwardly applied to machine learning models trained with any non-decomposable loss. In comparison to the classical approach in statistics, the proposed VIF is designed to fully leverage the power of auto-differentiation, hereby eliminating the need for case-specific derivations of each loss function. We demonstrate the effectiveness of VIF across three examples: Cox regression for survival analysis, node embedding for network analysis, and listwise learning-to-rank for information retrieval. In all cases, the influence estimated by VIF closely resembles the results obtained by brute-force leave-one-out retraining, while being up to $10^3$ times faster to compute. We believe VIF represents a significant advancement in data attribution, enabling efficient influence-function-based attribution across a wide range of machine learning paradigms, with broad potential for practical use cases.