HEP-EXFeb 20, 2023
Awkward to RDataFrame and backIanna Osborne, Jim Pivarski
Awkward Arrays and RDataFrame provide two very different ways of performing calculations at scale. By adding the ability to zero-copy convert between them, users get the best of both. It gives users a better flexibility in mixing different packages and languages in their analysis. In Awkward Array version 2, the ak.to_rdataframe function presents a view of an Awkward Array as an RDataFrame source. This view is generated on demand and the data are not copied. The column readers are generated based on the run-time type of the views. The readers are passed to a generated source derived from ROOT::RDF::RDataSource. The ak.from_rdataframe function converts the selected columns as native Awkward Arrays. The details of the implementation exploiting JIT techniques are discussed. The examples of analysis of data stored in Awkward Arrays via a high-level interface of an RDataFrame are presented. A few examples of the column definition, applying user-defined filters written in C++, and plotting or extracting the columnar data as Awkward Arrays are shown. Current limitations and future plans are discussed.
COMP-PHJul 8, 2018
Machine Learning in High Energy Physics Community White PaperKim Albertsson, Piero Altoe, Dustin Anderson et al.
Machine learning has been applied to several problems in particle physics research, beginning with applications to high-level physics analysis in the 1990s and 2000s, followed by an explosion of applications in particle and event identification and reconstruction in the 2010s. In this document we discuss promising future research and development areas for machine learning in particle physics. We detail a roadmap for their implementation, software and hardware resource requirements, collaborative initiatives with the data science community, academia and industry, and training the particle physics community in data science. The main objective of the document is to connect and motivate these areas of research and development with the physics drivers of the High-Luminosity Large Hadron Collider and future neutrino experiments and identify the resource needs for their implementation. Additionally we identify areas where collaboration with external communities will be of great benefit.
PLAug 20, 2017
Fast Access to Columnar, Hierarchically Nested Data via Code TransformationJim Pivarski, Peter Elmer, Brian Bockelman et al.
Big Data query systems represent data in a columnar format for fast, selective access, and in some cases (e.g. Apache Drill), perform calculations directly on the columnar data without row materialization, avoiding runtime costs. However, many analysis procedures cannot be easily or efficiently expressed as SQL. In High Energy Physics, the majority of data processing requires nested loops with complex dependencies. When faced with tasks like these, the conventional approach is to convert the columnar data back into an object form, usually with a performance price. This paper describes a new technique to transform procedural code so that it operates on hierarchically nested, columnar data natively, without row materialization. It can be viewed as a compiler pass on the typed abstract syntax tree, rewriting references to objects as columnar array lookups. We will also present performance comparisons between transformed code and conventional object-oriented code in a High Energy Physics context.