Rickard Brüel-Gabrielsson

Rickard Brüel-Gabrielsson, Tongzhou Wang, Manel Baradad et al.

Despite dropout's ubiquity in machine learning, its effectiveness as a form of data augmentation remains under-explored. We address two key questions: (i) When is dropout effective as an augmentation strategy? (ii) Is dropout uniquely effective under these conditions? To explore these questions, we propose Deep Augmentation, a network- and modality-agnostic method that applies dropout or PCA transformations to targeted layers in neural networks. Through extensive experiments on contrastive learning tasks in NLP, computer vision, and graph learning, we find that uniformly applying dropout across layers does not consistently improve performance. Instead, dropout proves most beneficial in deeper layers and can be matched by alternative augmentations (e.g., PCA). We also show that a stop-gradient operation is critical for ensuring dropout functions effectively as an augmentation, and that performance trends invert when moving from contrastive tasks to supervised tasks. Our analysis suggests that Deep Augmentation helps mitigate inter-layer co-adaptation -- a notable issue in self-supervised learning due to the absence of labeled data. Drawing on these insights, we outline a procedure for selecting the optimal augmentation layer and demonstrate that Deep Augmentation can outperform traditional input-level augmentations. This simple yet powerful approach can be seamlessly integrated into a wide range of architectures and modalities, yielding notable gains in both performance and generalization.

Rickard Brüel-Gabrielsson

In this work we produce a framework for constructing universal function approximators on graph isomorphism classes. We prove how this framework comes with a collection of theoretically desirable properties and enables novel analysis. We show how this allows us to achieve state-of-the-art performance on four different well-known datasets in graph classification and separate classes of graphs that other graph-learning methods cannot. Our approach is inspired by persistent homology, dependency parsing for NLP, and multivalued functions. The complexity of the underlying algorithm is O(#edges x #nodes) and code is publicly available (https://github.com/bruel-gabrielsson/universal-function-approximation-on-graphs).

Rickard Brüel-Gabrielsson, Bradley J. Nelson, Anjan Dwaraknath et al.

Topology applied to real world data using persistent homology has started to find applications within machine learning, including deep learning. We present a differentiable topology layer that computes persistent homology based on level set filtrations and edge-based filtrations. We present three novel applications: the topological layer can (i) regularize data reconstruction or the weights of machine learning models, (ii) construct a loss on the output of a deep generative network to incorporate topological priors, and (iii) perform topological adversarial attacks on deep networks trained with persistence features. The code (www.github.com/bruel-gabrielsson/TopologyLayer) is publicly available and we hope its availability will facilitate the use of persistent homology in deep learning and other gradient based applications.

Rickard Brüel-Gabrielsson, Jiacheng Zhu, Onkar Bhardwaj et al.

Fine-tuning large language models (LLMs) with low-rank adaptations (LoRAs) has become common practice, often yielding numerous copies of the same LLM differing only in their LoRA updates. This paradigm presents challenges for systems that serve real-time responses to queries that each involve a different LoRA. Prior works optimize the design of such systems but still require continuous loading and offloading of LoRAs, as it is infeasible to store thousands of LoRAs in GPU memory. To mitigate this issue, we investigate the efficacy of compression when serving LoRAs. We propose a method for the joint compression of LoRAs into a shared basis paired with LoRA-specific scaling matrices. We extend our algorithm to learn clusters of LoRAs that are amenable to joint compression, allowing it to scale gracefully to large LoRA collections. Our experiments with up to 1000 LoRAs demonstrate that compressed LoRAs preserve performance while offering major throughput gains in realistic serving scenarios with over a thousand LoRAs, maintaining 80% of the throughput of serving a single LoRA.

Rickard Brüel-Gabrielsson, Chris Scarvelis

Meaning is defined by the company it keeps. However, company is two-fold: It's based on the identity of tokens and also on their position (topology). We argue that a position-centric perspective is more general and useful. The classic MLM and CLM objectives in NLP are easily phrased as position predictions over the whole vocabulary. Adapting the relative position encoding paradigm in NLP to create relative labels for self-supervised learning, we seek to show superior pre-training judged by performance on downstream tasks.

Rickard Brüel-Gabrielsson, Mikhail Yurochkin, Justin Solomon

Several recent works use positional encodings to extend the receptive fields of graph neural network (GNN) layers equipped with attention mechanisms. These techniques, however, extend receptive fields to the complete graph, at substantial computational cost and risking a change in the inductive biases of conventional GNNs, or require complex architecture adjustments. As a conservative alternative, we use positional encodings to expand receptive fields to $r$-hop neighborhoods. More specifically, our method augments the input graph with additional nodes/edges and uses positional encodings as node and/or edge features. We thus modify graphs before inputting them to a downstream GNN model, instead of modifying the model itself. This makes our method model-agnostic, i.e., compatible with any of the existing GNN architectures. We also provide examples of positional encodings that are lossless with a one-to-one map between the original and the modified graphs. We demonstrate that extending receptive fields via positional encodings and a virtual fully-connected node significantly improves GNN performance and alleviates over-squashing using small $r$. We obtain improvements on a variety of models and datasets and reach competitive performance using traditional GNNs or graph Transformers.