Chi-Fu Jeffrey Yang

2papers

2 Papers

MLMar 9, 2023
Penalized Deep Partially Linear Cox Models with Application to CT Scans of Lung Cancer Patients

Yuming Sun, Jian Kang, Chinmay Haridas et al.

Lung cancer is a leading cause of cancer mortality globally, highlighting the importance of understanding its mortality risks to design effective patient-centered therapies. The National Lung Screening Trial (NLST) employed computed tomography texture analysis, which provides objective measurements of texture patterns on CT scans, to quantify the mortality risks of lung cancer patients. Partially linear Cox models have gained popularity for survival analysis by dissecting the hazard function into parametric and nonparametric components, allowing for the effective incorporation of both well-established risk factors (such as age and clinical variables) and emerging risk factors (e.g., image features) within a unified framework. However, when the dimension of parametric components exceeds the sample size, the task of model fitting becomes formidable, while nonparametric modeling grapples with the curse of dimensionality. We propose a novel Penalized Deep Partially Linear Cox Model (Penalized DPLC), which incorporates the SCAD penalty to select important texture features and employs a deep neural network to estimate the nonparametric component of the model. We prove the convergence and asymptotic properties of the estimator and compare it to other methods through extensive simulation studies, evaluating its performance in risk prediction and feature selection. The proposed method is applied to the NLST study dataset to uncover the effects of key clinical and imaging risk factors on patients' survival. Our findings provide valuable insights into the relationship between these factors and survival outcomes.

CVJun 13, 2024
Thoracic Surgery Video Analysis for Surgical Phase Recognition

Syed Abdul Mateen, Niharika Malvia, Syed Abdul Khader et al.

This paper presents an approach for surgical phase recognition using video data, aiming to provide a comprehensive understanding of surgical procedures for automated workflow analysis. The advent of robotic surgery, digitized operating rooms, and the generation of vast amounts of data have opened doors for the application of machine learning and computer vision in the analysis of surgical videos. Among these advancements, Surgical Phase Recognition(SPR) stands out as an emerging technology that has the potential to recognize and assess the ongoing surgical scenario, summarize the surgery, evaluate surgical skills, offer surgical decision support, and facilitate medical training. In this paper, we analyse and evaluate both frame-based and video clipping-based phase recognition on thoracic surgery dataset consisting of 11 classes of phases. Specifically, we utilize ImageNet ViT for image-based classification and VideoMAE as the baseline model for video-based classification. We show that Masked Video Distillation(MVD) exhibits superior performance, achieving a top-1 accuracy of 72.9%, compared to 52.31% achieved by ImageNet ViT. These findings underscore the efficacy of video-based classifiers over their image-based counterparts in surgical phase recognition tasks.