Ali Hossein Gharari Foomani

2papers

2 Papers

LGJun 20, 2023
Copula-Based Deep Survival Models for Dependent Censoring

Ali Hossein Gharari Foomani, Michael Cooper, Russell Greiner et al.

A survival dataset describes a set of instances (e.g. patients) and provides, for each, either the time until an event (e.g. death), or the censoring time (e.g. when lost to follow-up - which is a lower bound on the time until the event). We consider the challenge of survival prediction: learning, from such data, a predictive model that can produce an individual survival distribution for a novel instance. Many contemporary methods of survival prediction implicitly assume that the event and censoring distributions are independent conditional on the instance's covariates - a strong assumption that is difficult to verify (as we observe only one outcome for each instance) and which can induce significant bias when it does not hold. This paper presents a parametric model of survival that extends modern non-linear survival analysis by relaxing the assumption of conditional independence. On synthetic and semi-synthetic data, our approach significantly improves estimates of survival distributions compared to the standard that assumes conditional independence in the data.

LGSep 10, 2024Code
MENSA: A Multi-Event Network for Survival Analysis with Trajectory-based Likelihood Estimation

Christian Marius Lillelund, Ali Hossein Gharari Foomani, Weijie Sun et al.

Most existing time-to-event methods focus on either single-event or competing-risks settings, leaving multi-event scenarios relatively underexplored. In many healthcare applications, for example, a patient may experience multiple clinical events, that can be non-exclusive and semi-competing. A common workaround is to train independent single-event models for such multi-event problems, but this approach fails to exploit dependencies and shared structures across events. To overcome these limitations, we propose MENSA (Multi-Event Network for Survival Analysis), a deep learning model that jointly learns flexible time-to-event distributions for multiple events, whether competing or co-occurring. In addition, we introduce a novel trajectory-based likelihood term that captures the temporal ordering between events. Across four multi-event datasets, MENSA improves predictive performance over many state-of-the-art baselines. Source code is available at https://github.com/thecml/mensa.